Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709585

Identifier: 218709585

GI number: 218709585

Start: 1718345

End: 1719091

Strand: Reverse

Name: 218709585

Synonym: VS_1595

Alternate gene names: NA

Gene position: 1719091-1718345 (Counterclockwise)

Preceding gene: 218709588

Following gene: 218709584

Centisome position: 52.1

GC content: 39.49

Gene sequence:

>747_bases
ATGAGAAAAATAATATTAAACATTGTCTTACTATCGGTGTTTGTTGCGTCTTTATTTCTAACAATTTCATCAGCAATAGA
CATTTCAAAAGAAGTGACAGTAAAGCTCCATGAGTTTGATTGGAGTGGTGTCTCCGGTGTAATGGACATGGTCATGGTTA
TTTTAACTTTCGTCTTACTGGTTGGACTGAAACAAGGTTCGAAATCTATTGAGGAATCGACCCGAAGTCGTAACGCCGAA
TTGTTGAATTGGGCGATGGAAGAGATGTCAGCATTAAAACCTGCGATTAGGTTGGTGACAGACGCTCACAAAAGAGAGCC
TTATAGTCAGTTAACTAGTGACGTTAGTGTGGATTATGTATCGACATGGAGCAAAGAAGAATTACAAGCAGCTCAAGCTG
TAAGTGTCGCGTTGCAGAGAATGGGGTACTTTGCTACTCATGATTTGGTATCAAAAAAGCATTTTCTGAATCTTTGGGGG
CCTTTATATCTATCATGTTGGTACTCACTCGAAGGTTGGGTTAAACATAAGCGACTTCAACTTGATGAACCTTTTGATAT
CGCTGATGGTGCATACTCGAGGCTGTACTTTGAAAAATACGCCATGTACTGTGAAGAAAAGTTACCGCCTTTGTTATTGA
ATAATACAAGAAAGCAGTTTGGCTTAGAGCCAATGGTTCAACCCAAAGCCCACATTAAGTTGGGCATAAAATTGAAAGCA
AGGCTCACAGAAAAGGTTGATATCTAA

Upstream 100 bases:

>100_bases
GGTTTTTGACTGGTAAAAAGAGTTACTTAATGTTGGTAATTACTTAGGTTACTATTTAGCAAAGTATTGATTTGATATAC
AAAATTTTTGGACGAAGGTT

Downstream 100 bases:

>100_bases
CTACTCACCACACAATACTTTTTGGAATCAAAGGGGCTTGTTAGCTTGATCAACACATAAATGCTAAGAGTGTATTGGCT
GATCGTATATTGAAGAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRKIILNIVLLSVFVASLFLTISSAIDISKEVTVKLHEFDWSGVSGVMDMVMVILTFVLLVGLKQGSKSIEESTRSRNAE
LLNWAMEEMSALKPAIRLVTDAHKREPYSQLTSDVSVDYVSTWSKEELQAAQAVSVALQRMGYFATHDLVSKKHFLNLWG
PLYLSCWYSLEGWVKHKRLQLDEPFDIADGAYSRLYFEKYAMYCEEKLPPLLLNNTRKQFGLEPMVQPKAHIKLGIKLKA
RLTEKVDI

Sequences:

>Translated_248_residues
MRKIILNIVLLSVFVASLFLTISSAIDISKEVTVKLHEFDWSGVSGVMDMVMVILTFVLLVGLKQGSKSIEESTRSRNAE
LLNWAMEEMSALKPAIRLVTDAHKREPYSQLTSDVSVDYVSTWSKEELQAAQAVSVALQRMGYFATHDLVSKKHFLNLWG
PLYLSCWYSLEGWVKHKRLQLDEPFDIADGAYSRLYFEKYAMYCEEKLPPLLLNNTRKQFGLEPMVQPKAHIKLGIKLKA
RLTEKVDI
>Mature_248_residues
MRKIILNIVLLSVFVASLFLTISSAIDISKEVTVKLHEFDWSGVSGVMDMVMVILTFVLLVGLKQGSKSIEESTRSRNAE
LLNWAMEEMSALKPAIRLVTDAHKREPYSQLTSDVSVDYVSTWSKEELQAAQAVSVALQRMGYFATHDLVSKKHFLNLWG
PLYLSCWYSLEGWVKHKRLQLDEPFDIADGAYSRLYFEKYAMYCEEKLPPLLLNNTRKQFGLEPMVQPKAHIKLGIKLKA
RLTEKVDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28317; Mature: 28317

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIILNIVLLSVFVASLFLTISSAIDISKEVTVKLHEFDWSGVSGVMDMVMVILTFVLL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHH
VGLKQGSKSIEESTRSRNAELLNWAMEEMSALKPAIRLVTDAHKREPYSQLTSDVSVDYV
HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHH
STWSKEELQAAQAVSVALQRMGYFATHDLVSKKHFLNLWGPLYLSCWYSLEGWVKHKRLQ
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDEPFDIADGAYSRLYFEKYAMYCEEKLPPLLLNNTRKQFGLEPMVQPKAHIKLGIKLKA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCCCCCCCEEEEEEEEE
RLTEKVDI
HHHHHCCC
>Mature Secondary Structure
MRKIILNIVLLSVFVASLFLTISSAIDISKEVTVKLHEFDWSGVSGVMDMVMVILTFVLL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHH
VGLKQGSKSIEESTRSRNAELLNWAMEEMSALKPAIRLVTDAHKREPYSQLTSDVSVDYV
HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHH
STWSKEELQAAQAVSVALQRMGYFATHDLVSKKHFLNLWGPLYLSCWYSLEGWVKHKRLQ
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDEPFDIADGAYSRLYFEKYAMYCEEKLPPLLLNNTRKQFGLEPMVQPKAHIKLGIKLKA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCCCCCCCCCEEEEEEEEE
RLTEKVDI
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA