| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709588
Identifier: 218709588
GI number: 218709588
Start: 1719419
End: 1719670
Strand: Reverse
Name: 218709588
Synonym: VS_1598
Alternate gene names: NA
Gene position: 1719670-1719419 (Counterclockwise)
Preceding gene: 218709589
Following gene: 218709585
Centisome position: 52.12
GC content: 41.27
Gene sequence:
>252_bases ATGACAGATATGGCAATATCAAGCTACCTTGGCTGGTTGTTACTTCTTATAGGTTGTTATCCTTTCTGCCTTGTTGGTGT CAGTATGTTTTTCTATGATGCAGAGCGTAAACAAGCATTAAGGTGGTTGAACGGAGTTAGTTTTCTATTAGCTGCATTCC TTCTTTACATGCATATGCAGACAGAAGTCACCTATGGTCGGGAACTGCTCGAAGCCTGGTATCGTGATAACCCAGAAGAT AAGCCTCAATAA
Upstream 100 bases:
>100_bases CAATTTGAAGTGACTCGAAACTCGATTGTGTGAACTGCTAATAGTTGAATGGTTACTCTAAAGTACACTGAGTTTTCTAA CGGCTCTTAGGGGGGCAGAA
Downstream 100 bases:
>100_bases AAAAGCACATAACAAGTGTTTATTATCCATTTCGGTATATAAAAATGATGCTAAACGATTGGCATTTCCAGCTAGAATCA ACTTTAGTGTTTTCGGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MTDMAISSYLGWLLLLIGCYPFCLVGVSMFFYDAERKQALRWLNGVSFLLAAFLLYMHMQTEVTYGRELLEAWYRDNPED KPQ
Sequences:
>Translated_83_residues MTDMAISSYLGWLLLLIGCYPFCLVGVSMFFYDAERKQALRWLNGVSFLLAAFLLYMHMQTEVTYGRELLEAWYRDNPED KPQ >Mature_82_residues TDMAISSYLGWLLLLIGCYPFCLVGVSMFFYDAERKQALRWLNGVSFLLAAFLLYMHMQTEVTYGRELLEAWYRDNPEDK PQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9753; Mature: 9621
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDMAISSYLGWLLLLIGCYPFCLVGVSMFFYDAERKQALRWLNGVSFLLAAFLLYMHMQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEVTYGRELLEAWYRDNPEDKPQ HHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TDMAISSYLGWLLLLIGCYPFCLVGVSMFFYDAERKQALRWLNGVSFLLAAFLLYMHMQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEVTYGRELLEAWYRDNPEDKPQ HHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA