Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709588

Identifier: 218709588

GI number: 218709588

Start: 1719419

End: 1719670

Strand: Reverse

Name: 218709588

Synonym: VS_1598

Alternate gene names: NA

Gene position: 1719670-1719419 (Counterclockwise)

Preceding gene: 218709589

Following gene: 218709585

Centisome position: 52.12

GC content: 41.27

Gene sequence:

>252_bases
ATGACAGATATGGCAATATCAAGCTACCTTGGCTGGTTGTTACTTCTTATAGGTTGTTATCCTTTCTGCCTTGTTGGTGT
CAGTATGTTTTTCTATGATGCAGAGCGTAAACAAGCATTAAGGTGGTTGAACGGAGTTAGTTTTCTATTAGCTGCATTCC
TTCTTTACATGCATATGCAGACAGAAGTCACCTATGGTCGGGAACTGCTCGAAGCCTGGTATCGTGATAACCCAGAAGAT
AAGCCTCAATAA

Upstream 100 bases:

>100_bases
CAATTTGAAGTGACTCGAAACTCGATTGTGTGAACTGCTAATAGTTGAATGGTTACTCTAAAGTACACTGAGTTTTCTAA
CGGCTCTTAGGGGGGCAGAA

Downstream 100 bases:

>100_bases
AAAAGCACATAACAAGTGTTTATTATCCATTTCGGTATATAAAAATGATGCTAAACGATTGGCATTTCCAGCTAGAATCA
ACTTTAGTGTTTTCGGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MTDMAISSYLGWLLLLIGCYPFCLVGVSMFFYDAERKQALRWLNGVSFLLAAFLLYMHMQTEVTYGRELLEAWYRDNPED
KPQ

Sequences:

>Translated_83_residues
MTDMAISSYLGWLLLLIGCYPFCLVGVSMFFYDAERKQALRWLNGVSFLLAAFLLYMHMQTEVTYGRELLEAWYRDNPED
KPQ
>Mature_82_residues
TDMAISSYLGWLLLLIGCYPFCLVGVSMFFYDAERKQALRWLNGVSFLLAAFLLYMHMQTEVTYGRELLEAWYRDNPEDK
PQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9753; Mature: 9621

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDMAISSYLGWLLLLIGCYPFCLVGVSMFFYDAERKQALRWLNGVSFLLAAFLLYMHMQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEVTYGRELLEAWYRDNPEDKPQ
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TDMAISSYLGWLLLLIGCYPFCLVGVSMFFYDAERKQALRWLNGVSFLLAAFLLYMHMQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEVTYGRELLEAWYRDNPEDKPQ
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA