Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709584

Identifier: 218709584

GI number: 218709584

Start: 1717366

End: 1718226

Strand: Reverse

Name: 218709584

Synonym: VS_1594

Alternate gene names: NA

Gene position: 1718226-1717366 (Counterclockwise)

Preceding gene: 218709585

Following gene: 218709583

Centisome position: 52.08

GC content: 42.16

Gene sequence:

>861_bases
ATGTCATTGGTTATGTGTAATGGAGAGAATAAGGGAATAACGAAAGTATTAATTGCGGGGGCTAGTGGATACATTGGCCG
TCACGTTACATCGCTATTCACAAAAAGTGGCTTTGAAGTTTTTACATACGGTAGAGACAAAGTCGTCACACCTCCTATAG
TTGGGTTAATAGAAGATAGAGCTGACTTTGAAGGCTTCTTTGACGTGGTTGTGAATTGTGCGCGTCCACATTGGTCACAA
TTCTCCGCACATGAAATAGCCGATGTGGAGCAGAAATTGCTCTCTGAGTTAGACCTACTTGCCGCTAAAGGCGCAACAAA
GATACATACATCAGGTGTTTGGCTTTTTGGCAACGCATCTAGCGCTGATTTGAGACAGTTTAGACTGAAACCCTTAGACG
CCGTTAGATTAGACGTAGAAACGATACATAGCGCTATTAGAAACAGGTGGCACGTCGTCTACTGTCCTAGTTTGGTTTAT
GGCGGTGAGGATTGTCAGCTAAAACGAATTGTAGAACCTTTCGCTAGCCAAACGATTCAAGTAGGTGTGCCGTCTATAGG
CTATAACCAATATGTTCATGTCTACGACATTGCGAAGTTCTATCTACTTTTGGCGCAAGGCCGAACCTTAGAAAAGCAGC
ATTTTATTGCTGAGACGCAAGGCTATAGTCCTGCAGAGTTCGCTCGACTCTTACTAGCTGCAAAAGCTGTAACAAAAGTA
AGAAAGGTCCGTTGGGAAGAGTTTGAGTCAGAAAATGGCTCTATGGCCGTTGGTATTGAACAACTGAATCTAAAATTACC
AATTAGTTCTTCGTTTGAGGCTACTGAGTCAATTAGTGAATATATTGAAAATTACATATAG

Upstream 100 bases:

>100_bases
TTTTTGGAATCAAAGGGGCTTGTTAGCTTGATCAACACATAAATGCTAAGAGTGTATTGGCTGATCGTATATTGAAGAAT
GTTTCTTCAAAGGGAGATGC

Downstream 100 bases:

>100_bases
TTGAGTGCTTATTTCTAATTACCAACCCTAGTTACTTTTAGTTGAGTTTAGTCTCTCCGGCGTCTGTACTTAAGTTAATC
GGTAGCGTCACAATAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSLVMCNGENKGITKVLIAGASGYIGRHVTSLFTKSGFEVFTYGRDKVVTPPIVGLIEDRADFEGFFDVVVNCARPHWSQ
FSAHEIADVEQKLLSELDLLAAKGATKIHTSGVWLFGNASSADLRQFRLKPLDAVRLDVETIHSAIRNRWHVVYCPSLVY
GGEDCQLKRIVEPFASQTIQVGVPSIGYNQYVHVYDIAKFYLLLAQGRTLEKQHFIAETQGYSPAEFARLLLAAKAVTKV
RKVRWEEFESENGSMAVGIEQLNLKLPISSSFEATESISEYIENYI

Sequences:

>Translated_286_residues
MSLVMCNGENKGITKVLIAGASGYIGRHVTSLFTKSGFEVFTYGRDKVVTPPIVGLIEDRADFEGFFDVVVNCARPHWSQ
FSAHEIADVEQKLLSELDLLAAKGATKIHTSGVWLFGNASSADLRQFRLKPLDAVRLDVETIHSAIRNRWHVVYCPSLVY
GGEDCQLKRIVEPFASQTIQVGVPSIGYNQYVHVYDIAKFYLLLAQGRTLEKQHFIAETQGYSPAEFARLLLAAKAVTKV
RKVRWEEFESENGSMAVGIEQLNLKLPISSSFEATESISEYIENYI
>Mature_285_residues
SLVMCNGENKGITKVLIAGASGYIGRHVTSLFTKSGFEVFTYGRDKVVTPPIVGLIEDRADFEGFFDVVVNCARPHWSQF
SAHEIADVEQKLLSELDLLAAKGATKIHTSGVWLFGNASSADLRQFRLKPLDAVRLDVETIHSAIRNRWHVVYCPSLVYG
GEDCQLKRIVEPFASQTIQVGVPSIGYNQYVHVYDIAKFYLLLAQGRTLEKQHFIAETQGYSPAEFARLLLAAKAVTKVR
KVRWEEFESENGSMAVGIEQLNLKLPISSSFEATESISEYIENYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31942; Mature: 31811

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVMCNGENKGITKVLIAGASGYIGRHVTSLFTKSGFEVFTYGRDKVVTPPIVGLIEDR
CEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCC
ADFEGFFDVVVNCARPHWSQFSAHEIADVEQKLLSELDLLAAKGATKIHTSGVWLFGNAS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCC
SADLRQFRLKPLDAVRLDVETIHSAIRNRWHVVYCPSLVYGGEDCQLKRIVEPFASQTIQ
CHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHHHHCCEEE
VGVPSIGYNQYVHVYDIAKFYLLLAQGRTLEKQHFIAETQGYSPAEFARLLLAAKAVTKV
ECCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RKVRWEEFESENGSMAVGIEQLNLKLPISSSFEATESISEYIENYI
HHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLVMCNGENKGITKVLIAGASGYIGRHVTSLFTKSGFEVFTYGRDKVVTPPIVGLIEDR
EEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCC
ADFEGFFDVVVNCARPHWSQFSAHEIADVEQKLLSELDLLAAKGATKIHTSGVWLFGNAS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCC
SADLRQFRLKPLDAVRLDVETIHSAIRNRWHVVYCPSLVYGGEDCQLKRIVEPFASQTIQ
CHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHHHHCCEEE
VGVPSIGYNQYVHVYDIAKFYLLLAQGRTLEKQHFIAETQGYSPAEFARLLLAAKAVTKV
ECCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RKVRWEEFESENGSMAVGIEQLNLKLPISSSFEATESISEYIENYI
HHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA