| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is artM [H]
Identifier: 218709551
GI number: 218709551
Start: 1692330
End: 1692998
Strand: Reverse
Name: artM [H]
Synonym: VS_1561
Alternate gene names: 218709551
Gene position: 1692998-1692330 (Counterclockwise)
Preceding gene: 218709552
Following gene: 218709550
Centisome position: 51.31
GC content: 48.73
Gene sequence:
>669_bases ATGAATCAACAATACCTCTCCCAAATGCTTGAAGGCTTAGTGACCAGTCTTCAACTCACAGGCGCTTCATTGCTTGTTGG TTGTATATTGTCATTGCTGATGACGGTAACGCTAATCCTAAGGATCCCGGCGATTCACTGGTTAACACGTGGCATCATTA CGCTATTTACCGGCACACCATTGTTGGTTCAGATCTTCTTGGTGTATTACGGCCCGGGTCAATTCGATTGGATTCGTGAA AGTTTCCTATGGACATGGCTTAGCCAACCTTGGTTCTGCGCAATGTTAGCACTCGCACTGAACACCGCGGCATACAGCAC GCTACTGTTCAGAGGTGCATTTAACGCGATTCCAGCAGGGCAGTGGGAAGCATGTCGTGCATTAGGCATGGACAAAATTG CGACGCTTAAAGTGTTACTGCCATACGCACTACGTCGCGCCGTTCCAGCTTACTCGAACGAAGTGATTCTAGTCTTCAAA GGTACATCACTGGCAAGCACCATCACCATCATGGATTTGATGGGCTACGCTCAGCGTATCAACGGCCAAACCTACGACAC ACTCACAGTGTTCGGCATTGCTGGCGCATTCTACCTAGCAGTGAATGGTGTATTAACGCTGATCTTCCGCCAAGTAGAGA AAAAAGCCCTCGCATTCGAAGCGGCGTAA
Upstream 100 bases:
>100_bases CTGCAATCTACTTGGTCATCACTTTAATCACACAAAGATTGGTAAAAGTGATTGATGGTAAGTTTTCTATTCAAGGTTTG GGTAACAAAGGGGCAATGGC
Downstream 100 bases:
>100_bases GCTAGCCACTCACAAGCTTAACTAACGTATAAAGCCTGCCATTTATGTTCGCATAGATGGCAGGTTTTTTGTGTTTGGGG TATGTGTAGGGGTGCTGTGA
Product: arginine transporter permease subunit ArtM
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MNQQYLSQMLEGLVTSLQLTGASLLVGCILSLLMTVTLILRIPAIHWLTRGIITLFTGTPLLVQIFLVYYGPGQFDWIRE SFLWTWLSQPWFCAMLALALNTAAYSTLLFRGAFNAIPAGQWEACRALGMDKIATLKVLLPYALRRAVPAYSNEVILVFK GTSLASTITIMDLMGYAQRINGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKKALAFEAA
Sequences:
>Translated_222_residues MNQQYLSQMLEGLVTSLQLTGASLLVGCILSLLMTVTLILRIPAIHWLTRGIITLFTGTPLLVQIFLVYYGPGQFDWIRE SFLWTWLSQPWFCAMLALALNTAAYSTLLFRGAFNAIPAGQWEACRALGMDKIATLKVLLPYALRRAVPAYSNEVILVFK GTSLASTITIMDLMGYAQRINGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKKALAFEAA >Mature_222_residues MNQQYLSQMLEGLVTSLQLTGASLLVGCILSLLMTVTLILRIPAIHWLTRGIITLFTGTPLLVQIFLVYYGPGQFDWIRE SFLWTWLSQPWFCAMLALALNTAAYSTLLFRGAFNAIPAGQWEACRALGMDKIATLKVLLPYALRRAVPAYSNEVILVFK GTSLASTITIMDLMGYAQRINGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKKALAFEAA
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4160
COG function: function code E; ABC-type arginine/histidine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787086, Length=218, Percent_Identity=61.0091743119266, Blast_Score=269, Evalue=1e-73, Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=38.3495145631068, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1788226, Length=208, Percent_Identity=34.6153846153846, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI1787087, Length=220, Percent_Identity=28.1818181818182, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787030, Length=165, Percent_Identity=32.1212121212121, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1788646, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1786873, Length=227, Percent_Identity=22.9074889867841, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24558; Mature: 24558
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQQYLSQMLEGLVTSLQLTGASLLVGCILSLLMTVTLILRIPAIHWLTRGIITLFTGTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LLVQIFLVYYGPGQFDWIRESFLWTWLSQPWFCAMLALALNTAAYSTLLFRGAFNAIPAG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QWEACRALGMDKIATLKVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQRI CHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH NGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKKALAFEAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNQQYLSQMLEGLVTSLQLTGASLLVGCILSLLMTVTLILRIPAIHWLTRGIITLFTGTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LLVQIFLVYYGPGQFDWIRESFLWTWLSQPWFCAMLALALNTAAYSTLLFRGAFNAIPAG HHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QWEACRALGMDKIATLKVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQRI CHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH NGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKKALAFEAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]