| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is artQ [H]
Identifier: 218709552
GI number: 218709552
Start: 1692995
End: 1693681
Strand: Reverse
Name: artQ [H]
Synonym: VS_1562
Alternate gene names: 218709552
Gene position: 1693681-1692995 (Counterclockwise)
Preceding gene: 218709553
Following gene: 218709551
Centisome position: 51.33
GC content: 43.96
Gene sequence:
>687_bases ATGGAATTAACGGGTTACTCTTTAGGGCTCGTCGAAGCAAGCTGGATGACAGTTCAGCTTGCGTTCGTAAGCCTATTGGT AGGATTGGTTCTAGCAGTTTTGTTTGCAAGTGGTGAGATGTCTCGTCGTATTGCAATCAAATGGCCAACGACTGCATTTG TGACGATTGTTCGTGGTTTACCAGAAATTCTGGTCGTACTGTTTATCTACTTTGGTTCGACACAAGTTCTGTTCATGATC ACTGGCGACTTCATAGAAGTGAGCCCGTTCTTATCTGGTGTTGTTGCACTGTCACTTATTTTTGCTTCTTACGCTTCGCA AACTATTCGTGGTGCGTTGAAAGCAGTAAGCAAAGGGCAGAGAGAAGCAGCAAGTGCGCTTGGTATTTCGCAATCTCGTG CTTTCTTCAGAGTCGTATTGCCACAAGCAGTAAGACACGCTCTACCAGGGTTAACCAACCAATGGTTAGTGTTATTGAAA GACACAGCACTGGTTTCATTAATTGGCGTAACCGATCTATTGAAACAAGCGCAATTAACATCAGCGGCAACGCACGAAGC ATTCACTTGGTACGCGACAGCAGCTGCAATCTACTTGGTCATCACTTTAATCACACAAAGATTGGTAAAAGTGATTGATG GTAAGTTTTCTATTCAAGGTTTGGGTAACAAAGGGGCAATGGCATGA
Upstream 100 bases:
>100_bases TAACCAAGAACTTGTAGACCAGCTTAACGTTGCACTTGCAGCAGTGAAAGCGAACGGCGAATACGACAAGATCTTTAACA AGTACTTCGGTAAGTAATTT
Downstream 100 bases:
>100_bases ATCAACAATACCTCTCCCAAATGCTTGAAGGCTTAGTGACCAGTCTTCAACTCACAGGCGCTTCATTGCTTGTTGGTTGT ATATTGTCATTGCTGATGAC
Product: arginine transporter permease subunit ArtQ
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MELTGYSLGLVEASWMTVQLAFVSLLVGLVLAVLFASGEMSRRIAIKWPTTAFVTIVRGLPEILVVLFIYFGSTQVLFMI TGDFIEVSPFLSGVVALSLIFASYASQTIRGALKAVSKGQREAASALGISQSRAFFRVVLPQAVRHALPGLTNQWLVLLK DTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLITQRLVKVIDGKFSIQGLGNKGAMA
Sequences:
>Translated_228_residues MELTGYSLGLVEASWMTVQLAFVSLLVGLVLAVLFASGEMSRRIAIKWPTTAFVTIVRGLPEILVVLFIYFGSTQVLFMI TGDFIEVSPFLSGVVALSLIFASYASQTIRGALKAVSKGQREAASALGISQSRAFFRVVLPQAVRHALPGLTNQWLVLLK DTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLITQRLVKVIDGKFSIQGLGNKGAMA >Mature_228_residues MELTGYSLGLVEASWMTVQLAFVSLLVGLVLAVLFASGEMSRRIAIKWPTTAFVTIVRGLPEILVVLFIYFGSTQVLFMI TGDFIEVSPFLSGVVALSLIFASYASQTIRGALKAVSKGQREAASALGISQSRAFFRVVLPQAVRHALPGLTNQWLVLLK DTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLITQRLVKVIDGKFSIQGLGNKGAMA
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787087, Length=221, Percent_Identity=56.5610859728507, Blast_Score=230, Evalue=5e-62, Organism=Escherichia coli, GI1788646, Length=220, Percent_Identity=32.2727272727273, Blast_Score=141, Evalue=3e-35, Organism=Escherichia coli, GI1788226, Length=210, Percent_Identity=34.2857142857143, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=33.6448598130841, Blast_Score=111, Evalue=3e-26, Organism=Escherichia coli, GI1788645, Length=205, Percent_Identity=33.1707317073171, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI87082239, Length=205, Percent_Identity=29.2682926829268, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786873, Length=205, Percent_Identity=27.3170731707317, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787086, Length=204, Percent_Identity=26.9607843137255, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786874, Length=181, Percent_Identity=30.939226519337, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI48994930, Length=212, Percent_Identity=26.4150943396226, Blast_Score=71, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24511; Mature: 24511
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTGYSLGLVEASWMTVQLAFVSLLVGLVLAVLFASGEMSRRIAIKWPTTAFVTIVRGL CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH PEILVVLFIYFGSTQVLFMITGDFIEVSPFLSGVVALSLIFASYASQTIRGALKAVSKGQ HHHHHHHHHHHCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH REAASALGISQSRAFFRVVLPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLT HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH SAATHEAFTWYATAAAIYLVITLITQRLVKVIDGKFSIQGLGNKGAMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC >Mature Secondary Structure MELTGYSLGLVEASWMTVQLAFVSLLVGLVLAVLFASGEMSRRIAIKWPTTAFVTIVRGL CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH PEILVVLFIYFGSTQVLFMITGDFIEVSPFLSGVVALSLIFASYASQTIRGALKAVSKGQ HHHHHHHHHHHCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH REAASALGISQSRAFFRVVLPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLT HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH SAATHEAFTWYATAAAIYLVITLITQRLVKVIDGKFSIQGLGNKGAMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]