Click here to switch to the map view.

The map label for this gene is 218709550

Identifier: 218709550

GI number: 218709550

Start: 1691429

End: 1692160

Strand: Reverse

Name: 218709550

Synonym: VS_1559

Alternate gene names: NA

Gene position: 1692160-1691429 (Counterclockwise)

Preceding gene: 218709551

Following gene: 218709549

Centisome position: 51.29

GC content: 44.81

Gene sequence:

>732_bases
GTGTGGGCAACATTATGCGCGTTTGCTAATGAGCGGCATCACCTTGTCGGTCAACTTGGAGCATTAATGGTTCTTCACAC
TTGGGGAAGAAATCTGAGTCAACATACTCATATTCATTGCCTACTAACGAGTGGGGTGCTTACAAAAGATCGGCAATGGC
AACCGACAAGAAAAGAGAGTTACCTGCTTCCGGTTAAAGCCTTATCCGTTCGCTTTAAGAAAGAGATGTTATGTCGAGTA
AGCGAGTTGATAGCAACGCACAGTAATTTATTAGAGGAAGCCGCTAGTAAGAGATGGGTTGTGTACAGTAAACCTGTACT
CCACGAGCCTACAGCGGTAGTGGGTTATCTATCTCAGTATTGCAATCGTATCGGGTTAAATCCCAACCAATTAAGTTATA
ACGTGGATGGCCGTATCACGATGAGTTACAAAGACTATCGAACCAATGGGACGCAAAGAATGTGTTGTAATGCGGGCGAG
TTACTTCGACGCTTACTTTTACATGTGTTGCCTAAAGGGCTAATGCGAATACGCTACTATGGCTTTTTAGCTAATGCTGT
ACGGGTAAAAGCGATAGCGGAAATTAGGCAAAGCTTACGAAAGCGACCCGTAGAGAAGTCGGAAGTGCTGAAAGAGAAAC
CTTGTTGTCCGAACTGCCATAGCAACAGCATGGTACTCGTGTGCATCAATATTAGACCTAGGATAGTCGTTTCAGAGCAC
CGACTGACCTAG

Upstream 100 bases:

>100_bases
TGTGTTTGGGGTATGTGTAGGGGTGCTGTGATTACATACAGATCGGGAGGGTTTTCTCTAAAATCATACTATATAGAAAT
ATTCTGCATTTTGTCATTCA

Downstream 100 bases:

>100_bases
TTGTCTGATTGTAATGAATAAAATTATCGTTGTGTTATGGCGAGAGAGGGGCATTGTTCGCTTTTAAAAAGATTATGCAA
CGGGTATAGTCGCAGTAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MWATLCAFANERHHLVGQLGALMVLHTWGRNLSQHTHIHCLLTSGVLTKDRQWQPTRKESYLLPVKALSVRFKKEMLCRV
SELIATHSNLLEEAASKRWVVYSKPVLHEPTAVVGYLSQYCNRIGLNPNQLSYNVDGRITMSYKDYRTNGTQRMCCNAGE
LLRRLLLHVLPKGLMRIRYYGFLANAVRVKAIAEIRQSLRKRPVEKSEVLKEKPCCPNCHSNSMVLVCINIRPRIVVSEH
RLT

Sequences:

>Translated_243_residues
MWATLCAFANERHHLVGQLGALMVLHTWGRNLSQHTHIHCLLTSGVLTKDRQWQPTRKESYLLPVKALSVRFKKEMLCRV
SELIATHSNLLEEAASKRWVVYSKPVLHEPTAVVGYLSQYCNRIGLNPNQLSYNVDGRITMSYKDYRTNGTQRMCCNAGE
LLRRLLLHVLPKGLMRIRYYGFLANAVRVKAIAEIRQSLRKRPVEKSEVLKEKPCCPNCHSNSMVLVCINIRPRIVVSEH
RLT
>Mature_243_residues
MWATLCAFANERHHLVGQLGALMVLHTWGRNLSQHTHIHCLLTSGVLTKDRQWQPTRKESYLLPVKALSVRFKKEMLCRV
SELIATHSNLLEEAASKRWVVYSKPVLHEPTAVVGYLSQYCNRIGLNPNQLSYNVDGRITMSYKDYRTNGTQRMCCNAGE
LLRRLLLHVLPKGLMRIRYYGFLANAVRVKAIAEIRQSLRKRPVEKSEVLKEKPCCPNCHSNSMVLVCINIRPRIVVSEH
RLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007069 [H]

Pfam domain/function: PF04986 Transposase_32 [H]

EC number: NA

Molecular weight: Translated: 27929; Mature: 27929

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWATLCAFANERHHLVGQLGALMVLHTWGRNLSQHTHIHCLLTSGVLTKDRQWQPTRKES
CCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
YLLPVKALSVRFKKEMLCRVSELIATHSNLLEEAASKRWVVYSKPVLHEPTAVVGYLSQY
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHH
CNRIGLNPNQLSYNVDGRITMSYKDYRTNGTQRMCCNAGELLRRLLLHVLPKGLMRIRYY
HHHHCCCCCCEEEECCCEEEEEEHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GFLANAVRVKAIAEIRQSLRKRPVEKSEVLKEKPCCPNCHSNSMVLVCINIRPRIVVSEH
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEECCC
RLT
CCC
>Mature Secondary Structure
MWATLCAFANERHHLVGQLGALMVLHTWGRNLSQHTHIHCLLTSGVLTKDRQWQPTRKES
CCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
YLLPVKALSVRFKKEMLCRVSELIATHSNLLEEAASKRWVVYSKPVLHEPTAVVGYLSQY
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHH
CNRIGLNPNQLSYNVDGRITMSYKDYRTNGTQRMCCNAGELLRRLLLHVLPKGLMRIRYY
HHHHCCCCCCEEEECCCEEEEEEHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GFLANAVRVKAIAEIRQSLRKRPVEKSEVLKEKPCCPNCHSNSMVLVCINIRPRIVVSEH
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEECCC
RLT
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]