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The map label for this gene is epsF [H]

Identifier: 218709524

GI number: 218709524

Start: 1670471

End: 1671571

Strand: Direct

Name: epsF [H]

Synonym: VS_1533

Alternate gene names: 218709524

Gene position: 1670471-1671571 (Clockwise)

Preceding gene: 218709523

Following gene: 218709525

Centisome position: 50.63

GC content: 45.69

Gene sequence:

>1101_bases
ATGAATACGCATTTAACGAAGCATGGTAAAAAGATCATACACGTTGTTCAGCACCTCGCTCCCGGCGGATTAGAAACCCT
AACGTTAGATTTGCTGCGCCTTGCTAAACCAACAGACCAAGTGTTGATTGTCAGTTTAGAAGGGACAAAAGAAGACTCGA
TCAACAACTGGCCGAAATTAAAGCAGTATCAAAATCAAATCGTCTTTTTGGACAAAGCACCAGGCGTACAATTCAGTATC
ATCATCAAATTGATGAAAGCATTTAACGGTATTCGACCCGATGTGGTTCATACCCACCATATTGGCCCCCTACTTTATGC
TGGCTATGCGGCTCGCGTGACCGGAGTTCCAACTCGAATTCATACTGAACATGATGCTTGGCATTTGAAAAATAACAAAC
GTCGTCGCTTACAAGCCCTTGCATTGAAAGCGGCTCAACCAACGTTAGTGGCCGATGCAACACGCGTTTACAATCAATTG
CGTTGTGCGTTTTCATACAAAAACATCATCACGATTAAAAACGGCGTAGATTGTGAGAAGTTTAAACCGATGTCAAAAGC
AGACGCGAGAGCAAAGCACAACCTACCAACCGACAAATACATCATTGGTTGTGCGGGGCGTTTAGAGCACGTGAAAGGTC
AAGATCAGCTGATTAAGGCACTTGCTCTACTGCCATCAAACACCGTTGTCGCACTGGCTGGTGATGGTTCAAAACGCTAT
CAACTAGGACAACTCACTGACCGCTTGAATCTCAGCGAACGTGTGATCTTTCTTGGCTTAGTGGATGACATGACCACCTT
TTACGGAGCGCTGGATACCTTCTGCCTACCTTCACGCCACGAAGGGCTTCCTCTTTCTACACTCGAAGCCCAAGCATGTA
ATATTCCAACCGTCGCGATGAATGTCGGTGCGGTTGACGAAACCTTATGTCCCATCAGCAGTTCCCTCGTCAAAAGTGGC
AGCATTGCCGGATTAGCCAGCGCGCTATTAGAAAAACAAAATGAACGCTTTTTGTCTCCTCGTCGTTACGTGCTCGACAA
CTTCGATATCATCAAAATGGTTTCGTCTTACAACGATATCTCAGAAGGAGCATACGCATGA

Upstream 100 bases:

>100_bases
ACTCCTGCAATCTCATTGTAAAGCTAAACGTTTTAAAGAAGTAACTTCAAGACAAATGTCAGAAAGGCGAAACAAGATTT
ATAAAGGCAGGGTCCAAATT

Downstream 100 bases:

>100_bases
TCGATTGGTTACTTGCGGGACTTTGTCTGTTTTCAGGTGCGTTAATTGTCTATCATCACGCTGCCTATCCTTTACTACTA
CGCTGGTATGCGAAAAGTCA

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MNTHLTKHGKKIIHVVQHLAPGGLETLTLDLLRLAKPTDQVLIVSLEGTKEDSINNWPKLKQYQNQIVFLDKAPGVQFSI
IIKLMKAFNGIRPDVVHTHHIGPLLYAGYAARVTGVPTRIHTEHDAWHLKNNKRRRLQALALKAAQPTLVADATRVYNQL
RCAFSYKNIITIKNGVDCEKFKPMSKADARAKHNLPTDKYIIGCAGRLEHVKGQDQLIKALALLPSNTVVALAGDGSKRY
QLGQLTDRLNLSERVIFLGLVDDMTTFYGALDTFCLPSRHEGLPLSTLEAQACNIPTVAMNVGAVDETLCPISSSLVKSG
SIAGLASALLEKQNERFLSPRRYVLDNFDIIKMVSSYNDISEGAYA

Sequences:

>Translated_366_residues
MNTHLTKHGKKIIHVVQHLAPGGLETLTLDLLRLAKPTDQVLIVSLEGTKEDSINNWPKLKQYQNQIVFLDKAPGVQFSI
IIKLMKAFNGIRPDVVHTHHIGPLLYAGYAARVTGVPTRIHTEHDAWHLKNNKRRRLQALALKAAQPTLVADATRVYNQL
RCAFSYKNIITIKNGVDCEKFKPMSKADARAKHNLPTDKYIIGCAGRLEHVKGQDQLIKALALLPSNTVVALAGDGSKRY
QLGQLTDRLNLSERVIFLGLVDDMTTFYGALDTFCLPSRHEGLPLSTLEAQACNIPTVAMNVGAVDETLCPISSSLVKSG
SIAGLASALLEKQNERFLSPRRYVLDNFDIIKMVSSYNDISEGAYA
>Mature_366_residues
MNTHLTKHGKKIIHVVQHLAPGGLETLTLDLLRLAKPTDQVLIVSLEGTKEDSINNWPKLKQYQNQIVFLDKAPGVQFSI
IIKLMKAFNGIRPDVVHTHHIGPLLYAGYAARVTGVPTRIHTEHDAWHLKNNKRRRLQALALKAAQPTLVADATRVYNQL
RCAFSYKNIITIKNGVDCEKFKPMSKADARAKHNLPTDKYIIGCAGRLEHVKGQDQLIKALALLPSNTVVALAGDGSKRY
QLGQLTDRLNLSERVIFLGLVDDMTTFYGALDTFCLPSRHEGLPLSTLEAQACNIPTVAMNVGAVDETLCPISSSLVKSG
SIAGLASALLEKQNERFLSPRRYVLDNFDIIKMVSSYNDISEGAYA

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40424; Mature: 40424

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTHLTKHGKKIIHVVQHLAPGGLETLTLDLLRLAKPTDQVLIVSLEGTKEDSINNWPKL
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHH
KQYQNQIVFLDKAPGVQFSIIIKLMKAFNGIRPDVVHTHHIGPLLYAGYAARVTGVPTRI
HHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHCHHHHEECCCCEE
HTEHDAWHLKNNKRRRLQALALKAAQPTLVADATRVYNQLRCAFSYKNIITIKNGVDCEK
ECCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHH
FKPMSKADARAKHNLPTDKYIIGCAGRLEHVKGQDQLIKALALLPSNTVVALAGDGSKRY
CCCCCHHHHHHHCCCCCCCEEEECCCHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCE
QLGQLTDRLNLSERVIFLGLVDDMTTFYGALDTFCLPSRHEGLPLSTLEAQACNIPTVAM
EHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEE
NVGAVDETLCPISSSLVKSGSIAGLASALLEKQNERFLSPRRYVLDNFDIIKMVSSYNDI
ECCCCHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCC
SEGAYA
CCCCCC
>Mature Secondary Structure
MNTHLTKHGKKIIHVVQHLAPGGLETLTLDLLRLAKPTDQVLIVSLEGTKEDSINNWPKL
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHH
KQYQNQIVFLDKAPGVQFSIIIKLMKAFNGIRPDVVHTHHIGPLLYAGYAARVTGVPTRI
HHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHCHHHHEECCCCEE
HTEHDAWHLKNNKRRRLQALALKAAQPTLVADATRVYNQLRCAFSYKNIITIKNGVDCEK
ECCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHH
FKPMSKADARAKHNLPTDKYIIGCAGRLEHVKGQDQLIKALALLPSNTVVALAGDGSKRY
CCCCCHHHHHHHCCCCCCCEEEECCCHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCE
QLGQLTDRLNLSERVIFLGLVDDMTTFYGALDTFCLPSRHEGLPLSTLEAQACNIPTVAM
EHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEE
NVGAVDETLCPISSSLVKSGSIAGLASALLEKQNERFLSPRRYVLDNFDIIKMVSSYNDI
ECCCCHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCC
SEGAYA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]