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The map label for this gene is ycdQ [C]

Identifier: 218709525

GI number: 218709525

Start: 1671568

End: 1672755

Strand: Direct

Name: ycdQ [C]

Synonym: VS_1534

Alternate gene names: 218709525

Gene position: 1671568-1672755 (Clockwise)

Preceding gene: 218709524

Following gene: 218709526

Centisome position: 50.66

GC content: 42.59

Gene sequence:

>1188_bases
ATGATCGATTGGTTACTTGCGGGACTTTGTCTGTTTTCAGGTGCGTTAATTGTCTATCATCACGCTGCCTATCCTTTACT
ACTACGCTGGTATGCGAAAAGTCACCCAGCACGTCAAATTGAAGAGAGCCATCGTTGTTACAAAGATGAACAGCAAGATT
GTACGTTACCCACCATCACCATTCTTGTACCGGCATTTAACGAAGAGCAATGGATCGCAGACAAGATCCGTAATCTTGCT
TCACTCGATTACCCAAAAAAGAAGTTACAAGTGATTATTGCTTGTGATGGTTGTACTGATGACACGGTAAAAATCGCTCA
AATGACGATTCAAGAAGCGATGTGCAGCGATATCTATTTCGAGATACATGACCACAAAACCAACCGAGGGAAAGTTGCGG
TTATCAATGAAGAAGTGACAAGCATAAACAGCGACATTACGGCACTGAGTGATGTGTCAGCCCTTATTTCATTGGATGCG
CTGCTTATTGCCGCCGCTCACTTTGAAAGTGACAAGGTTGGCGTGGTAAACGCAACGTATCAGCTTTGCCCAACAGGTAA
CGAAGGTGAAAATACCTATTGGCAGTATCAAACCGCCGTTAAAGAGTCAGAAGCTTCATTAGGTTCGAGCTTAGGTTCTC
ATGGCGCTTTCTACTTGTTTAGAACACACCTGTTCGAACTGCTTCCACTCAACACTATTAATGATGATTTCATCCTACCG
ATGCGAATCGTTAAACAAGGTTACATCGCAGAATACGAAACACAAATGGTCGCACTGGAACTAGAAGAATCAAATTTAGA
AACAGATTTCAAAAGAAGACTTCGTATTTCAGCGGGTAACATGCAACAAGCGATTCGATTGTTTGGCTTGTTCAGCCCGA
AGTTCAAAGGCATCGCGTTTGCGTTCTTCTCTGGAAAAGGACTTCGTCTACTCACTCCATATTTAATGATTGTGTGCTTG
GTGTGCTCAATCTTACTTAACAACTACTTGGTATTTGAAGTGTTGTTATGGGCTCAAGGTGCCGTGTATACCATTGGCGT
ACTTGGCTGCATCTTGCCAAAGCGTCTCGTAAATAAACCTATTTCATTAATCTCTTATTTGATAGTTGGACACTATGCCA
ACTTCATTGGTGGCATTCGTTACCTAATCGGGCTAGAAAACTCACCTTGGACACGAGCGAATCATTAA

Upstream 100 bases:

>100_bases
AAAATGAACGCTTTTTGTCTCCTCGTCGTTACGTGCTCGACAACTTCGATATCATCAAAATGGTTTCGTCTTACAACGAT
ATCTCAGAAGGAGCATACGC

Downstream 100 bases:

>100_bases
GGACTTATTATGATGAATATTGAACAGCTATCTACCCAAAACTTATACCAATACAAAATCTCTCGTGCTAAACGTACTTT
CGATTTCGTGAGTTCACTGA

Product: putative glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Intercellular Adhesion Protein A; Glycosyl Transferase Group 2 Family Protein; Undecaprenyl-Phosphate Galactose Phosphotransferase; Group Glycosyltransferase; Group 2 Family Glycosyltransferase; Transmembrane Glycosyl Transferase; Group 2 Family Glycosyl Transferase; Glycosyl Transferase Gt2M; Family 2 Glycosyl Transferase

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MIDWLLAGLCLFSGALIVYHHAAYPLLLRWYAKSHPARQIEESHRCYKDEQQDCTLPTITILVPAFNEEQWIADKIRNLA
SLDYPKKKLQVIIACDGCTDDTVKIAQMTIQEAMCSDIYFEIHDHKTNRGKVAVINEEVTSINSDITALSDVSALISLDA
LLIAAAHFESDKVGVVNATYQLCPTGNEGENTYWQYQTAVKESEASLGSSLGSHGAFYLFRTHLFELLPLNTINDDFILP
MRIVKQGYIAEYETQMVALELEESNLETDFKRRLRISAGNMQQAIRLFGLFSPKFKGIAFAFFSGKGLRLLTPYLMIVCL
VCSILLNNYLVFEVLLWAQGAVYTIGVLGCILPKRLVNKPISLISYLIVGHYANFIGGIRYLIGLENSPWTRANH

Sequences:

>Translated_395_residues
MIDWLLAGLCLFSGALIVYHHAAYPLLLRWYAKSHPARQIEESHRCYKDEQQDCTLPTITILVPAFNEEQWIADKIRNLA
SLDYPKKKLQVIIACDGCTDDTVKIAQMTIQEAMCSDIYFEIHDHKTNRGKVAVINEEVTSINSDITALSDVSALISLDA
LLIAAAHFESDKVGVVNATYQLCPTGNEGENTYWQYQTAVKESEASLGSSLGSHGAFYLFRTHLFELLPLNTINDDFILP
MRIVKQGYIAEYETQMVALELEESNLETDFKRRLRISAGNMQQAIRLFGLFSPKFKGIAFAFFSGKGLRLLTPYLMIVCL
VCSILLNNYLVFEVLLWAQGAVYTIGVLGCILPKRLVNKPISLISYLIVGHYANFIGGIRYLIGLENSPWTRANH
>Mature_395_residues
MIDWLLAGLCLFSGALIVYHHAAYPLLLRWYAKSHPARQIEESHRCYKDEQQDCTLPTITILVPAFNEEQWIADKIRNLA
SLDYPKKKLQVIIACDGCTDDTVKIAQMTIQEAMCSDIYFEIHDHKTNRGKVAVINEEVTSINSDITALSDVSALISLDA
LLIAAAHFESDKVGVVNATYQLCPTGNEGENTYWQYQTAVKESEASLGSSLGSHGAFYLFRTHLFELLPLNTINDDFILP
MRIVKQGYIAEYETQMVALELEESNLETDFKRRLRISAGNMQQAIRLFGLFSPKFKGIAFAFFSGKGLRLLTPYLMIVCL
VCSILLNNYLVFEVLLWAQGAVYTIGVLGCILPKRLVNKPISLISYLIVGHYANFIGGIRYLIGLENSPWTRANH

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44417; Mature: 44417

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDWLLAGLCLFSGALIVYHHAAYPLLLRWYAKSHPARQIEESHRCYKDEQQDCTLPTIT
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEE
ILVPAFNEEQWIADKIRNLASLDYPKKKLQVIIACDGCTDDTVKIAQMTIQEAMCSDIYF
EEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEE
EIHDHKTNRGKVAVINEEVTSINSDITALSDVSALISLDALLIAAAHFESDKVGVVNATY
EEECCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
QLCPTGNEGENTYWQYQTAVKESEASLGSSLGSHGAFYLFRTHLFELLPLNTINDDFILP
EECCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH
MRIVKQGYIAEYETQMVALELEESNLETDFKRRLRISAGNMQQAIRLFGLFSPKFKGIAF
HHHHHCCCHHHHCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEE
AFFSGKGLRLLTPYLMIVCLVCSILLNNYLVFEVLLWAQGAVYTIGVLGCILPKRLVNKP
EEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCH
ISLISYLIVGHYANFIGGIRYLIGLENSPWTRANH
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC
>Mature Secondary Structure
MIDWLLAGLCLFSGALIVYHHAAYPLLLRWYAKSHPARQIEESHRCYKDEQQDCTLPTIT
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEE
ILVPAFNEEQWIADKIRNLASLDYPKKKLQVIIACDGCTDDTVKIAQMTIQEAMCSDIYF
EEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEE
EIHDHKTNRGKVAVINEEVTSINSDITALSDVSALISLDALLIAAAHFESDKVGVVNATY
EEECCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
QLCPTGNEGENTYWQYQTAVKESEASLGSSLGSHGAFYLFRTHLFELLPLNTINDDFILP
EECCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH
MRIVKQGYIAEYETQMVALELEESNLETDFKRRLRISAGNMQQAIRLFGLFSPKFKGIAF
HHHHHCCCHHHHCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEE
AFFSGKGLRLLTPYLMIVCLVCSILLNNYLVFEVLLWAQGAVYTIGVLGCILPKRLVNKP
EEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCH
ISLISYLIVGHYANFIGGIRYLIGLENSPWTRANH
HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA