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The map label for this gene is 218709514

Identifier: 218709514

GI number: 218709514

Start: 1658153

End: 1659145

Strand: Direct

Name: 218709514

Synonym: VS_1523

Alternate gene names: NA

Gene position: 1658153-1659145 (Clockwise)

Preceding gene: 218709513

Following gene: 218709515

Centisome position: 50.26

GC content: 46.02

Gene sequence:

>993_bases
ATGAAATACAAGTTAAGCTCCGTATTTTTGTTAGTAGCAGCAGCCAGCGGTAATGCTAACGCTGGAGAATGTGGCAGCGT
AACAATCGCAGATATGAACTGGAACTCTGCAACACTGATCGCCAATATCGACCAATTCATCCTAGAACATGGTTATGGGT
GTGATGCCGAACTTATCCCTGGCGACACCATGCCAACAGGCACATCCATGATTGAAAAAGGCCAGCCTGATGTTGCACCT
GAACTTTGGAGCAACAGCTTAAAAGACGCATTGGACAAGGGTGTCCAAGAAAAACGTCTTCGCTATGCAGGTAAAGCACT
TGTGAATGGCGGTGAAGAAGGCTTTTGGGTTCCAGCTTACTTAGTTAAACAATACCCAGAGATGGCAACCATCGAAGGTG
TACGTAAAAACGCTAGCTTATTTAAGCACCCTGAAGACCCAGATACATCAGCATTTTACAGTTGCCCAGCAGGCTGGAAC
TGTCAGATCAGTGCCGGAAACTTGTTTAACGCTCTTGAGCTGGAAGACAGTGGTTTCACGATTGTTGATCCAGGCTCGAG
TGCCGGCTTATCTGGCTCTATCGCAAAAGCTTATGAGCGCGAAGAAGCTTGGTTTGGTTACTACTGGGCGCCAACTGCCG
TTCTAGGCAAATACGACATGGTTAAAGTTGACTTTGGTAGTGGTGTTAATGAACAAGAGTTCTTAACTTGTACCACCAAA
GAAGACTGTGATTCACCTAAAGCGACCATGTATCCGCCTTCACCCGTTCACACTATCACCACTGAGAGTTTTGCGTCACG
TGCACCTGAAGCTTATGACTACTTCACTAAACGTGGCTTCACAAACGACAAAATGAACTCCCTACTTGCTTGGATGGAAG
ACAATCAAGCTGATGGTGAAGAAGCGAGCTTGCATTTTTTGAGTGAGTTCCCAGAAGTATGGCACCCATGGGTTTCTCAA
GAAGTGGCTAAGAAAGTTGAAGCCGAACTGTAA

Upstream 100 bases:

>100_bases
AATGGTTCAAATACACGGAAAGGATCACCATCGAGCAATTTAGATAATCAATTTACCTTGGTTACCTTAGTTGTATTATT
AAAGAGAAAGGAAACTCAAT

Downstream 100 bases:

>100_bases
CAGCTTGGTTTAACAACAAGTAATTACGCTTCAACAATAGAACAGAAATAACGTCGCTATACTTGATGTTATTCATGATT
CGGAGCCCTTTTCATAGGCG

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKYKLSSVFLLVAAASGNANAGECGSVTIADMNWNSATLIANIDQFILEHGYGCDAELIPGDTMPTGTSMIEKGQPDVAP
ELWSNSLKDALDKGVQEKRLRYAGKALVNGGEEGFWVPAYLVKQYPEMATIEGVRKNASLFKHPEDPDTSAFYSCPAGWN
CQISAGNLFNALELEDSGFTIVDPGSSAGLSGSIAKAYEREEAWFGYYWAPTAVLGKYDMVKVDFGSGVNEQEFLTCTTK
EDCDSPKATMYPPSPVHTITTESFASRAPEAYDYFTKRGFTNDKMNSLLAWMEDNQADGEEASLHFLSEFPEVWHPWVSQ
EVAKKVEAEL

Sequences:

>Translated_330_residues
MKYKLSSVFLLVAAASGNANAGECGSVTIADMNWNSATLIANIDQFILEHGYGCDAELIPGDTMPTGTSMIEKGQPDVAP
ELWSNSLKDALDKGVQEKRLRYAGKALVNGGEEGFWVPAYLVKQYPEMATIEGVRKNASLFKHPEDPDTSAFYSCPAGWN
CQISAGNLFNALELEDSGFTIVDPGSSAGLSGSIAKAYEREEAWFGYYWAPTAVLGKYDMVKVDFGSGVNEQEFLTCTTK
EDCDSPKATMYPPSPVHTITTESFASRAPEAYDYFTKRGFTNDKMNSLLAWMEDNQADGEEASLHFLSEFPEVWHPWVSQ
EVAKKVEAEL
>Mature_330_residues
MKYKLSSVFLLVAAASGNANAGECGSVTIADMNWNSATLIANIDQFILEHGYGCDAELIPGDTMPTGTSMIEKGQPDVAP
ELWSNSLKDALDKGVQEKRLRYAGKALVNGGEEGFWVPAYLVKQYPEMATIEGVRKNASLFKHPEDPDTSAFYSCPAGWN
CQISAGNLFNALELEDSGFTIVDPGSSAGLSGSIAKAYEREEAWFGYYWAPTAVLGKYDMVKVDFGSGVNEQEFLTCTTK
EDCDSPKATMYPPSPVHTITTESFASRAPEAYDYFTKRGFTNDKMNSLLAWMEDNQADGEEASLHFLSEFPEVWHPWVSQ
EVAKKVEAEL

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36196; Mature: 36196

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKLSSVFLLVAAASGNANAGECGSVTIADMNWNSATLIANIDQFILEHGYGCDAELIP
CCEECCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCEECC
GDTMPTGTSMIEKGQPDVAPELWSNSLKDALDKGVQEKRLRYAGKALVNGGEEGFWVPAY
CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHH
LVKQYPEMATIEGVRKNASLFKHPEDPDTSAFYSCPAGWNCQISAGNLFNALELEDSGFT
HHHHCCCHHHHHHHHHCHHHHCCCCCCCCCCEEECCCCCEEEEECCCCEEEEEECCCCCE
IVDPGSSAGLSGSIAKAYEREEAWFGYYWAPTAVLGKYDMVKVDFGSGVNEQEFLTCTTK
EECCCCCCCCCCHHHHHHHHCCCEEEEEECCHHHHCCCEEEEEECCCCCCCCCEEEEECH
EDCDSPKATMYPPSPVHTITTESFASRAPEAYDYFTKRGFTNDKMNSLLAWMEDNQADGE
HHCCCCCCCCCCCCCCEEEECHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
EASLHFLSEFPEVWHPWVSQEVAKKVEAEL
HHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYKLSSVFLLVAAASGNANAGECGSVTIADMNWNSATLIANIDQFILEHGYGCDAELIP
CCEECCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCEECC
GDTMPTGTSMIEKGQPDVAPELWSNSLKDALDKGVQEKRLRYAGKALVNGGEEGFWVPAY
CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHH
LVKQYPEMATIEGVRKNASLFKHPEDPDTSAFYSCPAGWNCQISAGNLFNALELEDSGFT
HHHHCCCHHHHHHHHHCHHHHCCCCCCCCCCEEECCCCCEEEEECCCCEEEEEECCCCCE
IVDPGSSAGLSGSIAKAYEREEAWFGYYWAPTAVLGKYDMVKVDFGSGVNEQEFLTCTTK
EECCCCCCCCCCHHHHHHHHCCCEEEEEECCHHHHCCCEEEEEECCCCCCCCCEEEEECH
EDCDSPKATMYPPSPVHTITTESFASRAPEAYDYFTKRGFTNDKMNSLLAWMEDNQADGE
HHCCCCCCCCCCCCCCEEEECHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
EASLHFLSEFPEVWHPWVSQEVAKKVEAEL
HHHHHHHHHCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA