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The map label for this gene is ycfJ [C]

Identifier: 218709072

GI number: 218709072

Start: 1134502

End: 1134957

Strand: Direct

Name: ycfJ [C]

Synonym: VS_1078

Alternate gene names: 218709072

Gene position: 1134502-1134957 (Clockwise)

Preceding gene: 218709068

Following gene: 218709073

Centisome position: 34.39

GC content: 46.05

Gene sequence:

>456_bases
ATGAAGAAGTTGCTTTGGATTTTACTTGTTTTGCCCATGTTGGCAAATGCAGCTTACAACAGAAACCAAGCCAGACCAGT
GAATGAGGTCGTTTACGGTGAGGTTGATACGGTCAGGTACATTACCCAACAGGAGATCGTAGAGTCGAAAGCGAATGGTT
GGGAAACCTTGTTGGGTGCGGCAATTGGTGGTTTGGTTGGTAATCAGTTTGGTGGCGGCACAGGTAAAGAAGTCGCAACG
GCGGTTGGTGCTGTAGCGGGGGCGGGGATCGCTCGTAATCGCGGTAATACGCAATATCGGGTGGAATATAAACTCGTTGA
ATTATTGGTTAAAACCAAGGACGACAATCTGGTTAACATCATTCAAGACGTTGACAATTCGATGTTGTTCAATAGAGGTG
ATGATGTGCGGATTCTCTATTTTTCAGATGGCGTTCGAGTTGATCTAGCGTACTAG

Upstream 100 bases:

>100_bases
GGAAACTCTATACTAGTAGTATCAAGTTCGGTTAAGTATATAGTCATAAGTACCGCATTACAGATTAATCACTGACCAAG
AGGTCTTTAGGAGTTTTACC

Downstream 100 bases:

>100_bases
TATATAAATGTGTTTAGTTGGCTAATTAATCGCCTTTATCGAGGGGATTAGCTCTGGAGTTCGTTGGAAAAGTTAGTTAG
TCTGCAAGTACGAAGAATTA

Product: putative outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Lipoprotein; Surface Antigen

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKKLLWILLVLPMLANAAYNRNQARPVNEVVYGEVDTVRYITQQEIVESKANGWETLLGAAIGGLVGNQFGGGTGKEVAT
AVGAVAGAGIARNRGNTQYRVEYKLVELLVKTKDDNLVNIIQDVDNSMLFNRGDDVRILYFSDGVRVDLAY

Sequences:

>Translated_151_residues
MKKLLWILLVLPMLANAAYNRNQARPVNEVVYGEVDTVRYITQQEIVESKANGWETLLGAAIGGLVGNQFGGGTGKEVAT
AVGAVAGAGIARNRGNTQYRVEYKLVELLVKTKDDNLVNIIQDVDNSMLFNRGDDVRILYFSDGVRVDLAY
>Mature_151_residues
MKKLLWILLVLPMLANAAYNRNQARPVNEVVYGEVDTVRYITQQEIVESKANGWETLLGAAIGGLVGNQFGGGTGKEVAT
AVGAVAGAGIARNRGNTQYRVEYKLVELLVKTKDDNLVNIIQDVDNSMLFNRGDDVRILYFSDGVRVDLAY

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16548; Mature: 16548

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLWILLVLPMLANAAYNRNQARPVNEVVYGEVDTVRYITQQEIVESKANGWETLLGA
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
AIGGLVGNQFGGGTGKEVATAVGAVAGAGIARNRGNTQYRVEYKLVELLVKTKDDNLVNI
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHH
IQDVDNSMLFNRGDDVRILYFSDGVRVDLAY
HHHCCHHEEECCCCCEEEEEECCCEEEEEEC
>Mature Secondary Structure
MKKLLWILLVLPMLANAAYNRNQARPVNEVVYGEVDTVRYITQQEIVESKANGWETLLGA
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
AIGGLVGNQFGGGTGKEVATAVGAVAGAGIARNRGNTQYRVEYKLVELLVKTKDDNLVNI
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHH
IQDVDNSMLFNRGDDVRILYFSDGVRVDLAY
HHHCCHHEEECCCCCEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA