| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708959
Identifier: 218708959
GI number: 218708959
Start: 993520
End: 994149
Strand: Direct
Name: 218708959
Synonym: VS_0963
Alternate gene names: NA
Gene position: 993520-994149 (Clockwise)
Preceding gene: 218708958
Following gene: 218708964
Centisome position: 30.11
GC content: 44.13
Gene sequence:
>630_bases ATGAACGTAAAACTTCATTATGTGCATGATCCAATGTGCAGCTGGTGTTGGGGCTACAAGCCAACGCTTGAGTTATTAAA ACAACAATTGCCAGCGAGCATTGAGTTTAGCTACGTAGTCGGTGGTTTGGCTCCGGATTCTGAAGAGCCGATGTCAGAAG AGATGAAAGGCAAGCTTCAGGCTATTTGGAAGCAGATTGAAGCTAAGCTGGGTACGGAATTTAATCATGAGTTTTGGACT GAATGCCAACCAGTTCGCAGCACTTACCCAGCGTGTCGTGCAGTGATCGCTGCTGGTTTTCAAGATCACTACGAAGCAAT GCTTGAAGCGATCCAACACGCTTACTACCTTCGTGCGATGCTGCCTCATAGCCAAGAAACGCATTTGCAGTTAGCTCAAG AGCTAGGGATGAATGTACAACAGTTTGAAAATGACCTTTCTAGTAAGCTATTGGAAAGCGAGTTAGATGACCAGTTAGGT TTTAAAGAAGCGATGGGTGTGCATTCTTACCCAACCTTAATGCTTGAGGTAAACGGTATCTTTAGTGAAGTTGAATTGGA TTACCATTCAACTGAAGCGACACTTAAGTCTATTCGCGAAATTCTAGTGAATAACGCTCCCGCTGCATAA
Upstream 100 bases:
>100_bases AGCTTTAGGCCTTGGTGCTTAAATATTGAATGGAAGGGGCCTTAATTAGGCTCCTTTTTTCGTTTGAATGGTTCAACAAA GACTCGATAAGGAATGAACA
Downstream 100 bases:
>100_bases TCCGGCGAGAGCTGTCTGTATTGACGCAATAACCTCTAAGGCTTACTCATAAGAGTAAGCCTTTTCTTTTGTCTGACGTA GTTGGTTTATCTCCTCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Protein-Disulfide Isomerase; Thioredoxin Domain-Containing Protein; Dsba Oxidoreductase; Dithiol-Disulfide Isomerase; Protein-Disulfide Isomerase-Like Protein; Thioredoxin-Like Fold; DsbA Oxidoreductase; Thioredoxin
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MNVKLHYVHDPMCSWCWGYKPTLELLKQQLPASIEFSYVVGGLAPDSEEPMSEEMKGKLQAIWKQIEAKLGTEFNHEFWT ECQPVRSTYPACRAVIAAGFQDHYEAMLEAIQHAYYLRAMLPHSQETHLQLAQELGMNVQQFENDLSSKLLESELDDQLG FKEAMGVHSYPTLMLEVNGIFSEVELDYHSTEATLKSIREILVNNAPAA
Sequences:
>Translated_209_residues MNVKLHYVHDPMCSWCWGYKPTLELLKQQLPASIEFSYVVGGLAPDSEEPMSEEMKGKLQAIWKQIEAKLGTEFNHEFWT ECQPVRSTYPACRAVIAAGFQDHYEAMLEAIQHAYYLRAMLPHSQETHLQLAQELGMNVQQFENDLSSKLLESELDDQLG FKEAMGVHSYPTLMLEVNGIFSEVELDYHSTEATLKSIREILVNNAPAA >Mature_209_residues MNVKLHYVHDPMCSWCWGYKPTLELLKQQLPASIEFSYVVGGLAPDSEEPMSEEMKGKLQAIWKQIEAKLGTEFNHEFWT ECQPVRSTYPACRAVIAAGFQDHYEAMLEAIQHAYYLRAMLPHSQETHLQLAQELGMNVQQFENDLSSKLLESELDDQLG FKEAMGVHSYPTLMLEVNGIFSEVELDYHSTEATLKSIREILVNNAPAA
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23796; Mature: 23796
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVKLHYVHDPMCSWCWGYKPTLELLKQQLPASIEFSYVVGGLAPDSEEPMSEEMKGKLQ CCCEEEEECCCHHHHHCCCCHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCHHHHHHHHHH AIWKQIEAKLGTEFNHEFWTECQPVRSTYPACRAVIAAGFQDHYEAMLEAIQHAYYLRAM HHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LPHSQETHLQLAQELGMNVQQFENDLSSKLLESELDDQLGFKEAMGVHSYPTLMLEVNGI CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCH FSEVELDYHSTEATLKSIREILVNNAPAA HHHHHCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNVKLHYVHDPMCSWCWGYKPTLELLKQQLPASIEFSYVVGGLAPDSEEPMSEEMKGKLQ CCCEEEEECCCHHHHHCCCCHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCHHHHHHHHHH AIWKQIEAKLGTEFNHEFWTECQPVRSTYPACRAVIAAGFQDHYEAMLEAIQHAYYLRAM HHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LPHSQETHLQLAQELGMNVQQFENDLSSKLLESELDDQLGFKEAMGVHSYPTLMLEVNGI CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCH FSEVELDYHSTEATLKSIREILVNNAPAA HHHHHCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA