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The map label for this gene is motY [H]

Identifier: 218708964

GI number: 218708964

Start: 1002470

End: 1003351

Strand: Direct

Name: motY [H]

Synonym: VS_0968

Alternate gene names: 218708964

Gene position: 1002470-1003351 (Clockwise)

Preceding gene: 218708959

Following gene: 218708975

Centisome position: 30.38

GC content: 45.24

Gene sequence:

>882_bases
ATGAAGAAACAACTCATAACAGGTTCAATGCTATTTTCGCTACTTATGTCGTCATCGGTATTGGCACAAGAAAAGCGTTA
CGGAGCATCTCCTCTACAGTCGACGTGGGAGATGGTGGCTAACACGCCACTAGAATGTCGCTTGGTTCACCCTATCCCCA
ACTTTGGTGATGCTGAGTTTTCATCTCGCGCGAGTAAAAAAATCATTTTGGATTTTGAGCTTAAAATGCGTCGCCCAATG
GGGGCGACACGCAATGTAAGCTTGATCTCTATGCCACCAGCTTGGCGTCCGGGCGAAAGTGCTGACCGCATGACGACCAT
TAAGTTCTTCCAACAATTTGATGGCTATGTTGGTGGTCAAACCGCTTGGGGTATTTTGAGTGAGTTGGAGAAAGGGCGTT
ACCCGACATTCAGCTATCAAGAGTGGCAGAGCCGAGATCAGCGAATCGAAGTTGCACTATCATCGGTATTATTCCAAGAA
AAGTATAATGTGTTCAGTGACTGTATCGCCAACTTATTGCCTTACAGCTTCGAAGATATCTCTTTTACTATCTTGCACTA
CGATCGTAACAGCGATCAGTTGAATAAGTCTTCACGTAAGAGACTCAGCCAGATTGCCGACTATGTTCGCTATAACCAAG
ACATCGACCTTGTGCTGGTGGCTACATACACCGATTCCGTCGATAGCAAAGGTATTAGCCAGAATCTTTCAGAGCGCAGA
GCGGAATCATTAAGAGAGTACTTTAAATCTCTAGGCTTGCCAGAAGACCGTATTCAAGTACAAGGTTATGGTAAGCGTCG
TCCAATTGCTGACAACAACTCGCCAATTGGTAAAGACAAAAACCGACGTGTTGTTATCTCTTTAGGTCGCACACAGGTGT
AA

Upstream 100 bases:

>100_bases
CCGACCTATTTCGGCTTGATAATTGCATATTCAAACGTGATGGAAAAATGCGGCAATTGGCTGCATTGTTAAACGAATTG
CTTAAGAGATACTCCACTTT

Downstream 100 bases:

>100_bases
GCTGAATAATAGCTCGTTTTGAAATGACAAAGCCCGTTTTCACTGATGACGGGCTTTTTTATATTTTAAATTTGAGTCGT
TGTTTAAACGTAATTTGTTT

Product: sodium type flagellar protein MotY precursor

Products: NA

Alternate protein names: Polar flagellum motor protein [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKKQLITGSMLFSLLMSSSVLAQEKRYGASPLQSTWEMVANTPLECRLVHPIPNFGDAEFSSRASKKIILDFELKMRRPM
GATRNVSLISMPPAWRPGESADRMTTIKFFQQFDGYVGGQTAWGILSELEKGRYPTFSYQEWQSRDQRIEVALSSVLFQE
KYNVFSDCIANLLPYSFEDISFTILHYDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDSKGISQNLSERR
AESLREYFKSLGLPEDRIQVQGYGKRRPIADNNSPIGKDKNRRVVISLGRTQV

Sequences:

>Translated_293_residues
MKKQLITGSMLFSLLMSSSVLAQEKRYGASPLQSTWEMVANTPLECRLVHPIPNFGDAEFSSRASKKIILDFELKMRRPM
GATRNVSLISMPPAWRPGESADRMTTIKFFQQFDGYVGGQTAWGILSELEKGRYPTFSYQEWQSRDQRIEVALSSVLFQE
KYNVFSDCIANLLPYSFEDISFTILHYDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDSKGISQNLSERR
AESLREYFKSLGLPEDRIQVQGYGKRRPIADNNSPIGKDKNRRVVISLGRTQV
>Mature_293_residues
MKKQLITGSMLFSLLMSSSVLAQEKRYGASPLQSTWEMVANTPLECRLVHPIPNFGDAEFSSRASKKIILDFELKMRRPM
GATRNVSLISMPPAWRPGESADRMTTIKFFQQFDGYVGGQTAWGILSELEKGRYPTFSYQEWQSRDQRIEVALSSVLFQE
KYNVFSDCIANLLPYSFEDISFTILHYDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDSKGISQNLSERR
AESLREYFKSLGLPEDRIQVQGYGKRRPIADNNSPIGKDKNRRVVISLGRTQV

Specific function: Plays the role of a stator in the sodium flagellar motor, stabilizing the force-generating unit through direct interaction with the cell wall. Involved in adherence and invasion of fish cell line [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 33541; Mature: 33541

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQLITGSMLFSLLMSSSVLAQEKRYGASPLQSTWEMVANTPLECRLVHPIPNFGDAEF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
SSRASKKIILDFELKMRRPMGATRNVSLISMPPAWRPGESADRMTTIKFFQQFDGYVGGQ
HHCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCH
TAWGILSELEKGRYPTFSYQEWQSRDQRIEVALSSVLFQEKYNVFSDCIANLLPYSFEDI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
SFTILHYDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDSKGISQNLSERR
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
AESLREYFKSLGLPEDRIQVQGYGKRRPIADNNSPIGKDKNRRVVISLGRTQV
HHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKKQLITGSMLFSLLMSSSVLAQEKRYGASPLQSTWEMVANTPLECRLVHPIPNFGDAEF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
SSRASKKIILDFELKMRRPMGATRNVSLISMPPAWRPGESADRMTTIKFFQQFDGYVGGQ
HHCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCH
TAWGILSELEKGRYPTFSYQEWQSRDQRIEVALSSVLFQEKYNVFSDCIANLLPYSFEDI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
SFTILHYDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDSKGISQNLSERR
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
AESLREYFKSLGLPEDRIQVQGYGKRRPIADNNSPIGKDKNRRVVISLGRTQV
HHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA