| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is phoB [H]
Identifier: 218708922
GI number: 218708922
Start: 948682
End: 950259
Strand: Reverse
Name: phoB [H]
Synonym: VS_0924
Alternate gene names: 218708922
Gene position: 950259-948682 (Counterclockwise)
Preceding gene: 218708923
Following gene: 218708917
Centisome position: 28.8
GC content: 45.31
Gene sequence:
>1578_bases ATGAAGCACATTATAAAACCAATCATTGCCGCAGTGGCAACCTCAACACTTTCATTCAACGTACTTTCAGCAGAAATCAA AAACGTCATTCTGATGATTGGCGATGGAATGGGACCTCAACAAGTTGGCCTGTTAGAAACCTACGCAAACCAAGCACCAA ACTCGATCTATAAAGGGAACAAAACCGCCCTTTATCAACTTGCTCAAGAAGGGGTTATTGGTTCATCCCTGACTCACCCA GAAGATGCAATTGTGGTCGATTCTGCTTGTTCAGCCACCATGCTTGCAACCGGTATCTACAGTGGTTCAGAAGTGATTGG CATTGATTCTCAGGGCAATCATGTTGAGACGGTTCTTGAGAAAGCTAAAAAGGCAGGTAAAGCAACAGGACTCGTGTCCG ATACGCGCTTAACTCACGCCACGCCTGCTGCATTTGCTGCTCACCAACCTCACCGTTCGCTAGAAAACCAAATTGCTAAC GACATGCTAGAAACTGGTGTTGATGTAATGCTTTCGGGAGGGCTACGTCATTGGATCCCTAAATCGACCAACGACAAAGG TGAAACCTATAAGCAACTTGAAAAACTGACTCAAGGTGATGTTTACCTAAAATCAAAACGTAAAGACGACCGTAACCTTC TTGCAGAGGCAGAGAAAGACGGCTACCAACTGGCATTTAACCGCAGCATGCTAGAAGATGCTAAAAGCGATAAGCTACTT GGCCTGTTCGCCTACTCAGGCATGGATGACGGCATCGCTTACAGCAACAAGAAAGAGAGTGGCGAACGTACTCAACCAAG TTTGAAAGAGATGACACAAAAAGCCCTCAACATCTTATCCAAAGATGAAGACGGCTTTTTCCTAATGGTCGAAGGTGGCC AAATAGATTGGGCGGGACACAGTAACGATGCCGGCACTATGCTGCATGAACTGCTCAAGTTTGATGAAGCGATCCAAACT GTGTATGAATGGGCAAAAAATCGTGAAGACACGATCGTGATTGTGACCGCAGACCACGAAACAGGATCTTTTGGATTCAG CTACTCTTCTAACGACCTACCAATACCACAAAAACGTTCTGGTGAAGCCTTCGCCGACCGCGACTATGCACCTAACTTCA ACTTTGGCGCATTCGATATTCTTGATGGTTTATATAATCAAAAGCAAAGCTACTACGGCATGATCAGCGAATTTCAGAAG CTGGATAAAGCGCAGCAAACACCTGAAAAACTGGCTGAGATCGTCAACAAGAATAGTGAGTTCCCTATTACAGCGGAACA AGCGAAAAACGTATTAGCGAGTAAGCCGAACCCATACCGATTGGCTCAACACAAATACTTATCGGCAGAAGAAGTGCCTG CTATCAACGATTTCGATGCATTCTTCCCTTATAACGACCGCGGAAACTTGCTTGCTCGTGAACAGGCAACAAGTCAAAAC ATCGTTTGGGGTACAGGTACACATACTCACACACCAGTGAACGTGTTTGCTTGGGGCCCAGCAGAGAAAATACTGCCCGT TTCAAAAATCATGCACCACTCAGAACTGGGTGAGTACATTAAACAACAAGTAAACTAG
Upstream 100 bases:
>100_bases TGGAGTTATTGCTCAATTTCACATTGATGAAATAAATATGAAACGACTTTGACACAAATCGATGTTCTAATCATCCCGCT TATATAAAAAGGGATAACCA
Downstream 100 bases:
>100_bases CCTGAATCTTTTTTACTCGTTTTACTTAGCGCCCTACGGGGCGTTTTTTGTTTTAAGCCTTTAAGTTAAGTAATTAAGTA AATTTAGGCGACGCCAAATA
Product: alkaline phosphatase III precursor
Products: NA
Alternate protein names: Alkaline phosphatase III; APase III [H]
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MKHIIKPIIAAVATSTLSFNVLSAEIKNVILMIGDGMGPQQVGLLETYANQAPNSIYKGNKTALYQLAQEGVIGSSLTHP EDAIVVDSACSATMLATGIYSGSEVIGIDSQGNHVETVLEKAKKAGKATGLVSDTRLTHATPAAFAAHQPHRSLENQIAN DMLETGVDVMLSGGLRHWIPKSTNDKGETYKQLEKLTQGDVYLKSKRKDDRNLLAEAEKDGYQLAFNRSMLEDAKSDKLL GLFAYSGMDDGIAYSNKKESGERTQPSLKEMTQKALNILSKDEDGFFLMVEGGQIDWAGHSNDAGTMLHELLKFDEAIQT VYEWAKNREDTIVIVTADHETGSFGFSYSSNDLPIPQKRSGEAFADRDYAPNFNFGAFDILDGLYNQKQSYYGMISEFQK LDKAQQTPEKLAEIVNKNSEFPITAEQAKNVLASKPNPYRLAQHKYLSAEEVPAINDFDAFFPYNDRGNLLAREQATSQN IVWGTGTHTHTPVNVFAWGPAEKILPVSKIMHHSELGEYIKQQVN
Sequences:
>Translated_525_residues MKHIIKPIIAAVATSTLSFNVLSAEIKNVILMIGDGMGPQQVGLLETYANQAPNSIYKGNKTALYQLAQEGVIGSSLTHP EDAIVVDSACSATMLATGIYSGSEVIGIDSQGNHVETVLEKAKKAGKATGLVSDTRLTHATPAAFAAHQPHRSLENQIAN DMLETGVDVMLSGGLRHWIPKSTNDKGETYKQLEKLTQGDVYLKSKRKDDRNLLAEAEKDGYQLAFNRSMLEDAKSDKLL GLFAYSGMDDGIAYSNKKESGERTQPSLKEMTQKALNILSKDEDGFFLMVEGGQIDWAGHSNDAGTMLHELLKFDEAIQT VYEWAKNREDTIVIVTADHETGSFGFSYSSNDLPIPQKRSGEAFADRDYAPNFNFGAFDILDGLYNQKQSYYGMISEFQK LDKAQQTPEKLAEIVNKNSEFPITAEQAKNVLASKPNPYRLAQHKYLSAEEVPAINDFDAFFPYNDRGNLLAREQATSQN IVWGTGTHTHTPVNVFAWGPAEKILPVSKIMHHSELGEYIKQQVN >Mature_525_residues MKHIIKPIIAAVATSTLSFNVLSAEIKNVILMIGDGMGPQQVGLLETYANQAPNSIYKGNKTALYQLAQEGVIGSSLTHP EDAIVVDSACSATMLATGIYSGSEVIGIDSQGNHVETVLEKAKKAGKATGLVSDTRLTHATPAAFAAHQPHRSLENQIAN DMLETGVDVMLSGGLRHWIPKSTNDKGETYKQLEKLTQGDVYLKSKRKDDRNLLAEAEKDGYQLAFNRSMLEDAKSDKLL GLFAYSGMDDGIAYSNKKESGERTQPSLKEMTQKALNILSKDEDGFFLMVEGGQIDWAGHSNDAGTMLHELLKFDEAIQT VYEWAKNREDTIVIVTADHETGSFGFSYSSNDLPIPQKRSGEAFADRDYAPNFNFGAFDILDGLYNQKQSYYGMISEFQK LDKAQQTPEKLAEIVNKNSEFPITAEQAKNVLASKPNPYRLAQHKYLSAEEVPAINDFDAFFPYNDRGNLLAREQATSQN IVWGTGTHTHTPVNVFAWGPAEKILPVSKIMHHSELGEYIKQQVN
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=354, Percent_Identity=32.4858757062147, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI94721246, Length=354, Percent_Identity=31.638418079096, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI116734717, Length=347, Percent_Identity=32.2766570605187, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI157266292, Length=354, Percent_Identity=31.638418079096, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI294660770, Length=343, Percent_Identity=31.4868804664723, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI294660772, Length=297, Percent_Identity=32.6599326599327, Blast_Score=120, Evalue=3e-27, Organism=Escherichia coli, GI48994877, Length=365, Percent_Identity=32.0547945205479, Blast_Score=135, Evalue=9e-33, Organism=Saccharomyces cerevisiae, GI6320689, Length=347, Percent_Identity=37.463976945245, Blast_Score=176, Evalue=7e-45, Organism=Drosophila melanogaster, GI21355981, Length=367, Percent_Identity=31.3351498637602, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI24651554, Length=348, Percent_Identity=34.4827586206897, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI21358067, Length=354, Percent_Identity=31.3559322033898, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI21355151, Length=358, Percent_Identity=32.122905027933, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI18859923, Length=346, Percent_Identity=31.5028901734104, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI19921912, Length=354, Percent_Identity=31.0734463276836, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI85725200, Length=367, Percent_Identity=29.700272479564, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI85815833, Length=367, Percent_Identity=29.700272479564, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24585213, Length=355, Percent_Identity=31.2676056338028, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI24651556, Length=301, Percent_Identity=35.8803986710963, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI24657835, Length=355, Percent_Identity=29.2957746478873, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24657827, Length=356, Percent_Identity=31.1797752808989, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI21355149, Length=351, Percent_Identity=27.9202279202279, Blast_Score=118, Evalue=8e-27, Organism=Drosophila melanogaster, GI24657842, Length=356, Percent_Identity=28.9325842696629, Blast_Score=112, Evalue=8e-25,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 57867; Mature: 57867
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIIKPIIAAVATSTLSFNVLSAEIKNVILMIGDGMGPQQVGLLETYANQAPNSIYKGN CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHCCC KTALYQLAQEGVIGSSLTHPEDAIVVDSACSATMLATGIYSGSEVIGIDSQGNHVETVLE HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHH KAKKAGKATGLVSDTRLTHATPAAFAAHQPHRSLENQIANDMLETGVDVMLSGGLRHWIP HHHHCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCHHHEECCCHHHCCC KSTNDKGETYKQLEKLTQGDVYLKSKRKDDRNLLAEAEKDGYQLAFNRSMLEDAKSDKLL CCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCEEEEECHHHHHHCCCCCEE GLFAYSGMDDGIAYSNKKESGERTQPSLKEMTQKALNILSKDEDGFFLMVEGGQIDWAGH EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCC SNDAGTMLHELLKFDEAIQTVYEWAKNREDTIVIVTADHETGSFGFSYSSNDLPIPQKRS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCC GEAFADRDYAPNFNFGAFDILDGLYNQKQSYYGMISEFQKLDKAQQTPEKLAEIVNKNSE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC FPITAEQAKNVLASKPNPYRLAQHKYLSAEEVPAINDFDAFFPYNDRGNLLAREQATSQN CCEEHHHHHHHHHCCCCCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEHHHCCCCC IVWGTGTHTHTPVNVFAWGPAEKILPVSKIMHHSELGEYIKQQVN EEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKHIIKPIIAAVATSTLSFNVLSAEIKNVILMIGDGMGPQQVGLLETYANQAPNSIYKGN CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHCCC KTALYQLAQEGVIGSSLTHPEDAIVVDSACSATMLATGIYSGSEVIGIDSQGNHVETVLE HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHH KAKKAGKATGLVSDTRLTHATPAAFAAHQPHRSLENQIANDMLETGVDVMLSGGLRHWIP HHHHCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCHHHEECCCHHHCCC KSTNDKGETYKQLEKLTQGDVYLKSKRKDDRNLLAEAEKDGYQLAFNRSMLEDAKSDKLL CCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCEEEEECHHHHHHCCCCCEE GLFAYSGMDDGIAYSNKKESGERTQPSLKEMTQKALNILSKDEDGFFLMVEGGQIDWAGH EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCC SNDAGTMLHELLKFDEAIQTVYEWAKNREDTIVIVTADHETGSFGFSYSSNDLPIPQKRS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCCCC GEAFADRDYAPNFNFGAFDILDGLYNQKQSYYGMISEFQKLDKAQQTPEKLAEIVNKNSE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC FPITAEQAKNVLASKPNPYRLAQHKYLSAEEVPAINDFDAFFPYNDRGNLLAREQATSQN CCEEHHHHHHHHHCCCCCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEHHHCCCCC IVWGTGTHTHTPVNVFAWGPAEKILPVSKIMHHSELGEYIKQQVN EEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1898729; 9202461; 9384377; 2113910; 2105301 [H]