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The map label for this gene is yeaV [H]

Identifier: 218708923

GI number: 218708923

Start: 950453

End: 952339

Strand: Reverse

Name: yeaV [H]

Synonym: VS_0925

Alternate gene names: 218708923

Gene position: 952339-950453 (Counterclockwise)

Preceding gene: 218708924

Following gene: 218708922

Centisome position: 28.86

GC content: 46.26

Gene sequence:

>1887_bases
GTGAAAAACACTTTTGAGCTTATTGATAAGCCTACCTTCTTTGGTGCTATTGCACTCCTACTCACGATAGTTTTCCCGCT
CATTTTGTTCCCAGCACAGGGCGCAGACTGGATTGCGGTTGCGAAAACATTCATGACGGATCAACTTGGATTTCTATATC
TCGCTCTAGGCCTCGCTGCCTGTGCCTTCATGGTTTACGTTGTGTTCAGTGATATGGGACAAATTAAACTGGGTGAAGCT
GATGAAGAACCTGAGTTCAAAACTGCATCATGGGCAGCAATGCTTTTCTGTGGTGGTATCGGCGCAAGTATCTTGTACTG
GGGCTGTATTGAATGGGCTTACTACTACCAATCACCGCCTTTCCAACTAGAACCCGGAAGTGAAGAAGCGGTTCGTTGGG
CGGCAACTTATGGTTTGTTTCACTGGGGACCAATCGCTTGGTCTATCTACCTGATCCCAGCGATTCCTATCGCTTACTTC
TTTTATGTGCGTAAACAGCCTGTTCTAAAGATCTCTAGTGCGTTAATGCCTGTTCTTGGTGAACACCGCAGTAAAGGCGT
ACCTGGAAAAATCGTCGATATCCTATTCATTTTCGGTCTACTGGGTGGCGCCGCGACAACACTAGGTTTAGCAGCACCTC
TCATCACTGAAGGTCTGAATCACCTATTCGGTCTACCTAAAAACAACCTTACGCAAGCAATGGTGCTTTTAGTTTGTACG
GCAATTTTTGCTTACTCTTCTTATGCTGGCTTGGAAAAAGGCATCAAGATCCTGAGTAACATCAATTTCTGGGGTGCAAT
GGGTTTACTGACTTTCGTTCTGATCGCCGGTCCAACAATCTTCATGCTAGAAACAGGTTTAGACTCTATTGGTCGTCTAC
TGTCTAACTTCTTCGTGATGGCAACGTGGGCTGAACCATTTGGTGGTTACGGTACCTTTGAGAACACGCACTTCCCACAA
GACTGGACCATTTTCTACTGGGCATGGTGGCTAGTATTTGCACCAAGTATGGGCCTGTTTGTTGCGCGTATCTCTCGCGG
AAGAACCATCAAACAAATGGTGTCAGGTTCAATTTTCTTTGGCTCTCTAGGTTGTTTCTTGTTTTTCATGATCTTAGGTA
ACTATGGCCTATCACTGCAACTTTCTGGTGAACTGGATGTAGTAGCGATTTTGAATGCAGAAGGCGCTACCAAAGCTATC
TTCTCGATGCTTGCGCAACTGCCAATGAGTACACTAGTTATCGCGGTATTTACGCTGCTGTGTATTATTTTCACTGCAAC
GACATTTGACTCAATCTCATACATCCTAGCGTCTGTTGTGCAAAACAACGTGACCGAAGAGCCAATGCGTTGGAACCGTA
TGTTCTGGGCATTCACACTGTCGTTCTTGCCAACGATTCTGATGTTCTTGGGGGGTCTAAGTACGCTACAAACGGCAGCA
ATAGTTGGTGGCTTACCGCTACTGGTGATCTCTGTGATGCTGATGATTTCAGCGGTTCGTGCAACTAGCCTCGACCTACG
CCATCAAGACGCGTACATCGAGCCAACGATCAATATCGAAGAACTACCAGATATGGACCCTTGGTCTGCAGAAGGTATGG
CACTGGCTCAATTTGAGAAAGAAAGAGATGCAGCACAAGAAGCCGCAGAACTTGAGCGTGTTGCTTACACAGAACTTGCC
GCAGTGAAGAAAGAAATTCGCGCTTATGTGCTAGAACAAGGTGCACAAATGGAAACTCACGAGTTACCAGAGAACCTACA
ACAAGCACTTGAGCAGGCCGAGAGTAATCTTAGTGCCGCACAAGCGAAAAAAATCGAGTTATCTGAGCAAGCTCAGAATG
CTCGTATCACGTTCAACCAGGTGGTTGCAGACTTACCGCTTGCTTGA

Upstream 100 bases:

>100_bases
ATTGAATAGAAGCAATTTGTCGTCACGACAACAGACCTGATTTGGTCTAAAAAACGAGTTCATTCCATAATTCCGCTCTC
ATTTTAATGGAATAATACTC

Downstream 100 bases:

>100_bases
CATTAGCCATGACGCAGTCCATTGATTTGGACCCTCCTAAATACGACAAAGGCTCACAGAAATGTGAGCCTTTTTTTATG
CTTTTCAAAAAATTGGAGTT

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MKNTFELIDKPTFFGAIALLLTIVFPLILFPAQGADWIAVAKTFMTDQLGFLYLALGLAACAFMVYVVFSDMGQIKLGEA
DEEPEFKTASWAAMLFCGGIGASILYWGCIEWAYYYQSPPFQLEPGSEEAVRWAATYGLFHWGPIAWSIYLIPAIPIAYF
FYVRKQPVLKISSALMPVLGEHRSKGVPGKIVDILFIFGLLGGAATTLGLAAPLITEGLNHLFGLPKNNLTQAMVLLVCT
AIFAYSSYAGLEKGIKILSNINFWGAMGLLTFVLIAGPTIFMLETGLDSIGRLLSNFFVMATWAEPFGGYGTFENTHFPQ
DWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGSIFFGSLGCFLFFMILGNYGLSLQLSGELDVVAILNAEGATKAI
FSMLAQLPMSTLVIAVFTLLCIIFTATTFDSISYILASVVQNNVTEEPMRWNRMFWAFTLSFLPTILMFLGGLSTLQTAA
IVGGLPLLVISVMLMISAVRATSLDLRHQDAYIEPTINIEELPDMDPWSAEGMALAQFEKERDAAQEAAELERVAYTELA
AVKKEIRAYVLEQGAQMETHELPENLQQALEQAESNLSAAQAKKIELSEQAQNARITFNQVVADLPLA

Sequences:

>Translated_628_residues
MKNTFELIDKPTFFGAIALLLTIVFPLILFPAQGADWIAVAKTFMTDQLGFLYLALGLAACAFMVYVVFSDMGQIKLGEA
DEEPEFKTASWAAMLFCGGIGASILYWGCIEWAYYYQSPPFQLEPGSEEAVRWAATYGLFHWGPIAWSIYLIPAIPIAYF
FYVRKQPVLKISSALMPVLGEHRSKGVPGKIVDILFIFGLLGGAATTLGLAAPLITEGLNHLFGLPKNNLTQAMVLLVCT
AIFAYSSYAGLEKGIKILSNINFWGAMGLLTFVLIAGPTIFMLETGLDSIGRLLSNFFVMATWAEPFGGYGTFENTHFPQ
DWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGSIFFGSLGCFLFFMILGNYGLSLQLSGELDVVAILNAEGATKAI
FSMLAQLPMSTLVIAVFTLLCIIFTATTFDSISYILASVVQNNVTEEPMRWNRMFWAFTLSFLPTILMFLGGLSTLQTAA
IVGGLPLLVISVMLMISAVRATSLDLRHQDAYIEPTINIEELPDMDPWSAEGMALAQFEKERDAAQEAAELERVAYTELA
AVKKEIRAYVLEQGAQMETHELPENLQQALEQAESNLSAAQAKKIELSEQAQNARITFNQVVADLPLA
>Mature_628_residues
MKNTFELIDKPTFFGAIALLLTIVFPLILFPAQGADWIAVAKTFMTDQLGFLYLALGLAACAFMVYVVFSDMGQIKLGEA
DEEPEFKTASWAAMLFCGGIGASILYWGCIEWAYYYQSPPFQLEPGSEEAVRWAATYGLFHWGPIAWSIYLIPAIPIAYF
FYVRKQPVLKISSALMPVLGEHRSKGVPGKIVDILFIFGLLGGAATTLGLAAPLITEGLNHLFGLPKNNLTQAMVLLVCT
AIFAYSSYAGLEKGIKILSNINFWGAMGLLTFVLIAGPTIFMLETGLDSIGRLLSNFFVMATWAEPFGGYGTFENTHFPQ
DWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGSIFFGSLGCFLFFMILGNYGLSLQLSGELDVVAILNAEGATKAI
FSMLAQLPMSTLVIAVFTLLCIIFTATTFDSISYILASVVQNNVTEEPMRWNRMFWAFTLSFLPTILMFLGGLSTLQTAA
IVGGLPLLVISVMLMISAVRATSLDLRHQDAYIEPTINIEELPDMDPWSAEGMALAQFEKERDAAQEAAELERVAYTELA
AVKKEIRAYVLEQGAQMETHELPENLQQALEQAESNLSAAQAKKIELSEQAQNARITFNQVVADLPLA

Specific function: Unknown

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BCCT transporter (TC 2.A.15) family [H]

Homologues:

Organism=Escherichia coli, GI1788102, Length=472, Percent_Identity=35.1694915254237, Blast_Score=306, Evalue=2e-84,
Organism=Escherichia coli, GI1786224, Length=437, Percent_Identity=36.3844393592677, Blast_Score=284, Evalue=1e-77,
Organism=Escherichia coli, GI1786506, Length=594, Percent_Identity=30.1346801346801, Blast_Score=254, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000060
- InterPro:   IPR018093 [H]

Pfam domain/function: PF02028 BCCT [H]

EC number: NA

Molecular weight: Translated: 69209; Mature: 69209

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS01303 BCCT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTFELIDKPTFFGAIALLLTIVFPLILFPAQGADWIAVAKTFMTDQLGFLYLALGLAA
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
CAFMVYVVFSDMGQIKLGEADEEPEFKTASWAAMLFCGGIGASILYWGCIEWAYYYQSPP
HHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
FQLEPGSEEAVRWAATYGLFHWGPIAWSIYLIPAIPIAYFFYVRKQPVLKISSALMPVLG
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EHRSKGVPGKIVDILFIFGLLGGAATTLGLAAPLITEGLNHLFGLPKNNLTQAMVLLVCT
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AIFAYSSYAGLEKGIKILSNINFWGAMGLLTFVLIAGPTIFMLETGLDSIGRLLSNFFVM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHEEEHHCHHHHHHHHHHHHEE
ATWAEPFGGYGTFENTHFPQDWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGSIFF
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCHHH
GSLGCFLFFMILGNYGLSLQLSGELDVVAILNAEGATKAIFSMLAQLPMSTLVIAVFTLL
HHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHH
CIIFTATTFDSISYILASVVQNNVTEEPMRWNRMFWAFTLSFLPTILMFLGGLSTLQTAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVGGLPLLVISVMLMISAVRATSLDLRHQDAYIEPTINIEELPDMDPWSAEGMALAQFEK
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHCCCCCCCCCCCCHHHHHHH
ERDAAQEAAELERVAYTELAAVKKEIRAYVLEQGAQMETHELPENLQQALEQAESNLSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHH
QAKKIELSEQAQNARITFNQVVADLPLA
HHHHHHHHHHHCCCCEEHHHHHHHCCCC
>Mature Secondary Structure
MKNTFELIDKPTFFGAIALLLTIVFPLILFPAQGADWIAVAKTFMTDQLGFLYLALGLAA
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
CAFMVYVVFSDMGQIKLGEADEEPEFKTASWAAMLFCGGIGASILYWGCIEWAYYYQSPP
HHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
FQLEPGSEEAVRWAATYGLFHWGPIAWSIYLIPAIPIAYFFYVRKQPVLKISSALMPVLG
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EHRSKGVPGKIVDILFIFGLLGGAATTLGLAAPLITEGLNHLFGLPKNNLTQAMVLLVCT
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AIFAYSSYAGLEKGIKILSNINFWGAMGLLTFVLIAGPTIFMLETGLDSIGRLLSNFFVM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHEEEHHCHHHHHHHHHHHHEE
ATWAEPFGGYGTFENTHFPQDWTIFYWAWWLVFAPSMGLFVARISRGRTIKQMVSGSIFF
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCHHH
GSLGCFLFFMILGNYGLSLQLSGELDVVAILNAEGATKAIFSMLAQLPMSTLVIAVFTLL
HHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHH
CIIFTATTFDSISYILASVVQNNVTEEPMRWNRMFWAFTLSFLPTILMFLGGLSTLQTAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVGGLPLLVISVMLMISAVRATSLDLRHQDAYIEPTINIEELPDMDPWSAEGMALAQFEK
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHCCCCCCCCCCCCHHHHHHH
ERDAAQEAAELERVAYTELAAVKKEIRAYVLEQGAQMETHELPENLQQALEQAESNLSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHH
QAKKIELSEQAQNARITFNQVVADLPLA
HHHHHHHHHHHCCCCEEHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]