| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is folK [H]
Identifier: 218708442
GI number: 218708442
Start: 410724
End: 411206
Strand: Direct
Name: folK [H]
Synonym: VS_0405
Alternate gene names: 218708442
Gene position: 410724-411206 (Clockwise)
Preceding gene: 218708441
Following gene: 218708443
Centisome position: 12.45
GC content: 42.86
Gene sequence:
>483_bases ATGACAATAGCCTATGTTGGTGTTGGCACGAACATAGACCGCGACAAGCATGCAAGGGTGGCATGGACAGAGCTTCAATC ATTAGGGACTAACCTTAAATGCTCTAAGATCTATCACTGTGAGCCTGTGGGGTTTAAAAGCCACTCGTTTTATAACTTTG TGGTTGAGATCGATACATCACTCTCATTGACTGAATTTTCACAGCACCTGCGTGAAATTGAGTTTAAATGGGGTCGCCCT CAAGATGCCCATAAGCTTCAAGATCGAAAGCTCGATCTTGATATTGTGCTGTTTGGAGAGGTGGTATCAGAGAGCGATCC AGAATTACCACGCAGTGATATCTATAAATATCCTTTTGTAACACAACCACTTTATGATCTTTGTCCTGCGAGAGTGATCC CGCAAGATGGAAGAACCGTCAGTGAAATATGGCAGAAGATGCAGCAATTAGATACGCTCTCTGTCGTTGATATAACACTA TAA
Upstream 100 bases:
>100_bases TGACTCAGTTCTCAGTGCCTTGGATTAAAATCCGTTTAGCGAAGCCTGGCGCAGTACCACAAGCAAAAGCCGTGGGTGTG ATCATCGAACGAGGCCAAGC
Downstream 100 bases:
>100_bases TTTTTTAGGGTAAGTAATGAGTTATTTTGAAGCGTTTATGTTGGCGTTGGTGCAAGGCTTTACTGAGTTTTTACCTATTT CCAGCTCTGCACACTTAATC
Product: 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MTIAYVGVGTNIDRDKHARVAWTELQSLGTNLKCSKIYHCEPVGFKSHSFYNFVVEIDTSLSLTEFSQHLREIEFKWGRP QDAHKLQDRKLDLDIVLFGEVVSESDPELPRSDIYKYPFVTQPLYDLCPARVIPQDGRTVSEIWQKMQQLDTLSVVDITL
Sequences:
>Translated_160_residues MTIAYVGVGTNIDRDKHARVAWTELQSLGTNLKCSKIYHCEPVGFKSHSFYNFVVEIDTSLSLTEFSQHLREIEFKWGRP QDAHKLQDRKLDLDIVLFGEVVSESDPELPRSDIYKYPFVTQPLYDLCPARVIPQDGRTVSEIWQKMQQLDTLSVVDITL >Mature_159_residues TIAYVGVGTNIDRDKHARVAWTELQSLGTNLKCSKIYHCEPVGFKSHSFYNFVVEIDTSLSLTEFSQHLREIEFKWGRPQ DAHKLQDRKLDLDIVLFGEVVSESDPELPRSDIYKYPFVTQPLYDLCPARVIPQDGRTVSEIWQKMQQLDTLSVVDITL
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=150, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 18447; Mature: 18316
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAYVGVGTNIDRDKHARVAWTELQSLGTNLKCSKIYHCEPVGFKSHSFYNFVVEIDTS CEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEECEEEECCCCCCCCCCEEEEEEEECCC LSLTEFSQHLREIEFKWGRPQDAHKLQDRKLDLDIVLFGEVVSESDPELPRSDIYKYPFV CCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEEHHHCCCCCCCCHHHCCCCCCC TQPLYDLCPARVIPQDGRTVSEIWQKMQQLDTLSVVDITL CCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEC >Mature Secondary Structure TIAYVGVGTNIDRDKHARVAWTELQSLGTNLKCSKIYHCEPVGFKSHSFYNFVVEIDTS EEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEECEEEECCCCCCCCCCEEEEEEEECCC LSLTEFSQHLREIEFKWGRPQDAHKLQDRKLDLDIVLFGEVVSESDPELPRSDIYKYPFV CCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEEHHHCCCCCCCCHHHCCCCCCC TQPLYDLCPARVIPQDGRTVSEIWQKMQQLDTLSVVDITL CCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1325970; 8202364; 9278503; 1657875; 2537812; 10378268; 10452528 [H]