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The map label for this gene is ssb [H]

Identifier: 218708363

GI number: 218708363

Start: 316458

End: 317015

Strand: Direct

Name: ssb [H]

Synonym: VS_0323

Alternate gene names: 218708363

Gene position: 316458-317015 (Clockwise)

Preceding gene: 218708358

Following gene: 218708364

Centisome position: 9.59

GC content: 48.92

Gene sequence:

>558_bases
ATGGCTAGCCGTGGAGTTAACAAAGTTATATTAGTGGGTAACCTAGGTAATGACCCTGAAATTCGTTACATGCCAAATGG
CGGTGCAGTAGCGAACATTACCATTGCAACGTCAGAGTCATGGCGTGACAAAGCAACTGGCGAACAGCGCGAAAAAACAG
AATGGCACCGTGTTGCTCTGTTTGGCAAGCTGGCGGAAGTTGCTGGTGAGTACCTACGTAAAGGTTCTCAAGTTTACATT
GAAGGTCAACTTCAAACGCGTAAATGGCAAGATCAAAGCGGTCAAGATCGCTACACAACAGAAGTCGTTGTTCAAGGCTT
CAACGGTGTAATGCAAATGCTTGGCGGTCGTGCTCAAGGCGGTGCTCCTGCCCAAGGTGGTATGGGTAACAACCAACAGC
AAGGTAGTTGGGGGCAGCCACAGCAGCCACAACAACAGCAGCAACAATACAGTGCGCCAGCTCAACAGCAGCCGAAAGCA
CCTCAACAAGCTCCTCAGCAGGCTCAACCTCAATATAATGAGCCGCCGATGGATTTTGATGATGACATCCCATTTTAA

Upstream 100 bases:

>100_bases
TCGTGAGGAGAGAATAGGAATGCGATTTATCACTGCAGAAAAGCATGCTATTCTTGTGCGCTAAAATTTTCTGAGACTAT
GAATTTAGACGGAGCAAATC

Downstream 100 bases:

>100_bases
GCACTGTTTTTAATATATTATAAAAGCAGTATTAAATTGGAAGAAGCCGCGTTCATCGCGGCTTTTTGTTACCTACAATT
CTTAACGCTTTATTTACAAC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MASRGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQGGAPAQGGMGNNQQQGSWGQPQQPQQQQQQYSAPAQQQPKA
PQQAPQQAQPQYNEPPMDFDDDIPF

Sequences:

>Translated_185_residues
MASRGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQGGAPAQGGMGNNQQQGSWGQPQQPQQQQQQYSAPAQQQPKA
PQQAPQQAQPQYNEPPMDFDDDIPF
>Mature_184_residues
ASRGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYIE
GQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQGGAPAQGGMGNNQQQGSWGQPQQPQQQQQQYSAPAQQQPKAP
QQAPQQAQPQYNEPPMDFDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=109, Percent_Identity=32.1100917431193, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1790494, Length=185, Percent_Identity=74.054054054054, Blast_Score=239, Evalue=8e-65,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 20431; Mature: 20300

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVAL
CCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEEECCCCCCHHCCCCHHHHHHHHHHHH
FGKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQG
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GAPAQGGMGNNQQQGSWGQPQQPQQQQQQYSAPAQQQPKAPQQAPQQAQPQYNEPPMDFD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
DDIPF
CCCCC
>Mature Secondary Structure 
ASRGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVAL
CCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEEECCCCCCHHCCCCHHHHHHHHHHHH
FGKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQG
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GAPAQGGMGNNQQQGSWGQPQQPQQQQQQYSAPAQQQPKAPQQAPQQAQPQYNEPPMDFD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
DDIPF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9973335; 10952301 [H]