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The map label for this gene is frdC [H]

Identifier: 218708308

GI number: 218708308

Start: 242080

End: 242463

Strand: Reverse

Name: frdC [H]

Synonym: VS_0246

Alternate gene names: 218708308

Gene position: 242463-242080 (Counterclockwise)

Preceding gene: 218708309

Following gene: 218708307

Centisome position: 7.35

GC content: 45.83

Gene sequence:

>384_bases
ATGAGCAATCGTAAGCCTTATGTTCGTGATATGAAGAGAACATGGTGGAGCAACCATCCGTTCTACCGCTTCTACATGCT
ACGTGAAGCGACTGTACTGCCTTTGATTCTATTCACTCTGTTCCTAACCTTCGGTTTGGGTTCGCTAGTGAAAGGCCCTG
AAGCATGGGAAGGTTGGCTATCTTTTATGGCTAACCCTATCGTTGTTGGTATCAACATCGTGGCACTGCTTGGCAGCTTA
CTGCACGCTCAGACCTTCTTCAGCATGATGCCTCAAGTAATGCCAATCCGTCTTAAAGGCAAATTGGTAGATAAAAGAAT
CATCGTACTGACCCAGTGGGCAGCGGTGGCATTTATTTCTTTAATCGTTCTGATGGTGGTGTAA

Upstream 100 bases:

>100_bases
GCAGCTGTAAACCAAGGCAAAGTTGAGTCTTCAATGGACTTCGTTATCTCGATGTTCAAGCCTGATGGATCGCAAGTAAA
AACAGCAGAGGAGGCATAAT

Downstream 100 bases:

>100_bases
GGAGCTTCGTTATGAACACAAATTACAATGTTAACCACAATCCGAAACGTTCTGATGAACCAATCTGGTGGGGCCTATTC
GGCGCTGGCGGTACTTGGTT

Product: fumarate reductase subunit C

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSNRKPYVRDMKRTWWSNHPFYRFYMLREATVLPLILFTLFLTFGLGSLVKGPEAWEGWLSFMANPIVVGINIVALLGSL
LHAQTFFSMMPQVMPIRLKGKLVDKRIIVLTQWAAVAFISLIVLMVV

Sequences:

>Translated_127_residues
MSNRKPYVRDMKRTWWSNHPFYRFYMLREATVLPLILFTLFLTFGLGSLVKGPEAWEGWLSFMANPIVVGINIVALLGSL
LHAQTFFSMMPQVMPIRLKGKLVDKRIIVLTQWAAVAFISLIVLMVV
>Mature_126_residues
SNRKPYVRDMKRTWWSNHPFYRFYMLREATVLPLILFTLFLTFGLGSLVKGPEAWEGWLSFMANPIVVGINIVALLGSLL
HAQTFFSMMPQVMPIRLKGKLVDKRIIVLTQWAAVAFISLIVLMVV

Specific function: Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane [H]

COG id: COG3029

COG function: function code C; Fumarate reductase subunit C

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frdC family [H]

Homologues:

Organism=Escherichia coli, GI1790595, Length=125, Percent_Identity=43.2, Blast_Score=119, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003510
- ProDom:   PD015900 [H]

Pfam domain/function: PF02300 Fumarate_red_C [H]

EC number: 1.3.99.1

Molecular weight: Translated: 14616; Mature: 14485

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRKPYVRDMKRTWWSNHPFYRFYMLREATVLPLILFTLFLTFGLGSLVKGPEAWEGWL
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHH
SFMANPIVVGINIVALLGSLLHAQTFFSMMPQVMPIRLKGKLVDKRIIVLTQWAAVAFIS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHCHHHHHHHHHHHHHHHH
LIVLMVV
HHHHHHC
>Mature Secondary Structure 
SNRKPYVRDMKRTWWSNHPFYRFYMLREATVLPLILFTLFLTFGLGSLVKGPEAWEGWL
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHH
SFMANPIVVGINIVALLGSLLHAQTFFSMMPQVMPIRLKGKLVDKRIIVLTQWAAVAFIS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHCHHHHHHHHHHHHHHHH
LIVLMVV
HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA