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The map label for this gene is frdD [H]

Identifier: 218708307

GI number: 218708307

Start: 241691

End: 242128

Strand: Reverse

Name: frdD [H]

Synonym: VS_0245

Alternate gene names: 218708307

Gene position: 242128-241691 (Counterclockwise)

Preceding gene: 218708308

Following gene: 218708305

Centisome position: 7.34

GC content: 48.4

Gene sequence:

>438_bases
GTGGGCAGCGGTGGCATTTATTTCTTTAATCGTTCTGATGGTGGTGTAAGGAGCTTCGTTATGAACACAAATTACAATGT
TAACCACAATCCGAAACGTTCTGATGAACCAATCTGGTGGGGCCTATTCGGCGCTGGCGGTACTTGGTTCGCGATGATCA
CACCAATCACGATTCTAGTGCTGGGTATCTTGGTGCCAATGGGCATTATCGATGCGGATGCAATGAGCTACGAGCGTGTC
TCTGAGTTTGCCACCAGCATTATCGGTGCGCTATTCATCATCGGTACACTAGCACTGCCAATGTGGCACGCAATGCACCG
TCTTCACCACGGCATGCACGACCTTAAGTTCCACGTCGGCGTTGCAGGTAAAGTTGGTTGCTACTTCGTTGCAGGCCTTA
TTAGCGCGCTGTCTGTTATCTTCATTTTTATGATTTAA

Upstream 100 bases:

>100_bases
GCTTACTGCACGCTCAGACCTTCTTCAGCATGATGCCTCAAGTAATGCCAATCCGTCTTAAAGGCAAATTGGTAGATAAA
AGAATCATCGTACTGACCCA

Downstream 100 bases:

>100_bases
CAGTTAAGAGCAGATTCTAGATTCGGGTAACTGAGATTCGAAGAGTTTAAGAACGAAAGTACTAAAAGCAGAACAGGATT
ATCTTGTTCTGCTTTTTTGT

Product: fumarate reductase subunit D

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MGSGGIYFFNRSDGGVRSFVMNTNYNVNHNPKRSDEPIWWGLFGAGGTWFAMITPITILVLGILVPMGIIDADAMSYERV
SEFATSIIGALFIIGTLALPMWHAMHRLHHGMHDLKFHVGVAGKVGCYFVAGLISALSVIFIFMI

Sequences:

>Translated_145_residues
MGSGGIYFFNRSDGGVRSFVMNTNYNVNHNPKRSDEPIWWGLFGAGGTWFAMITPITILVLGILVPMGIIDADAMSYERV
SEFATSIIGALFIIGTLALPMWHAMHRLHHGMHDLKFHVGVAGKVGCYFVAGLISALSVIFIFMI
>Mature_144_residues
GSGGIYFFNRSDGGVRSFVMNTNYNVNHNPKRSDEPIWWGLFGAGGTWFAMITPITILVLGILVPMGIIDADAMSYERVS
EFATSIIGALFIIGTLALPMWHAMHRLHHGMHDLKFHVGVAGKVGCYFVAGLISALSVIFIFMI

Specific function: Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane [H]

COG id: COG3080

COG function: function code C; Fumarate reductase subunit D

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frdD family [H]

Homologues:

Organism=Escherichia coli, GI1790594, Length=114, Percent_Identity=53.5087719298246, Blast_Score=130, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003418
- ProDom:   PD015693 [H]

Pfam domain/function: PF02313 Fumarate_red_D [H]

EC number: 1.3.99.1

Molecular weight: Translated: 15922; Mature: 15791

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSGGIYFFNRSDGGVRSFVMNTNYNVNHNPKRSDEPIWWGLFGAGGTWFAMITPITILV
CCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
LGILVPMGIIDADAMSYERVSEFATSIIGALFIIGTLALPMWHAMHRLHHGMHDLKFHVG
HHHHHHHCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEC
VAGKVGCYFVAGLISALSVIFIFMI
CCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GSGGIYFFNRSDGGVRSFVMNTNYNVNHNPKRSDEPIWWGLFGAGGTWFAMITPITILV
CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
LGILVPMGIIDADAMSYERVSEFATSIIGALFIIGTLALPMWHAMHRLHHGMHDLKFHVG
HHHHHHHCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEC
VAGKVGCYFVAGLISALSVIFIFMI
CCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA