Click here to switch to the map view.

The map label for this gene is uspB

Identifier: 218708158

GI number: 218708158

Start: 85560

End: 85883

Strand: Direct

Name: uspB

Synonym: VS_0092

Alternate gene names: 218708158

Gene position: 85560-85883 (Clockwise)

Preceding gene: 218708157

Following gene: 218708160

Centisome position: 2.59

GC content: 42.59

Gene sequence:

>324_bases
ATGATCAGCGGCGACACTATTCTATTTGCACTAATGGTTGTGACTTGTGTGAACTGGGCGCGTTACTTTACTGCGCTAAG
AACACTCATTTATATTATGCGAGAAGCACACCCTCTACTATATCAACAAGTAGATGGAGGCGGTTTTTTCACAACCCATG
GCAATATGACCAAACAGGTTCGCCTGTTTAGTTACATCAAAAGCAAAGAGTATCACCACCATCACGACGAAGTTTTTACG
TCGAAGTGCGATCGTGTAAGGCAGTTATTCATACTCTCTTCTGCTCTGTTAGGTGTAACCTTGCTGTCTTCTTTCATCGT
CTAA

Upstream 100 bases:

>100_bases
CATCTTCAATTATGGAAGCTCCTGCCGTTTAGGTAGTACGAGAAAGACACTGATTATCTTTTTCTTTTGAGTTTTCTTAT
GAAGATGTAAGGAGGAAAGG

Downstream 100 bases:

>100_bases
GTCATTTAGTACGATTGAAGTAGAGCTTAGATTTTTGGTGTAAAGCTTCGGTTGTTGGTTCGCCAAGCCAAACAGTGGCT
TGCTGCTGTCTGCAAATTGT

Product: universal stress protein UspB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MISGDTILFALMVVTCVNWARYFTALRTLIYIMREAHPLLYQQVDGGGFFTTHGNMTKQVRLFSYIKSKEYHHHHDEVFT
SKCDRVRQLFILSSALLGVTLLSSFIV

Sequences:

>Translated_107_residues
MISGDTILFALMVVTCVNWARYFTALRTLIYIMREAHPLLYQQVDGGGFFTTHGNMTKQVRLFSYIKSKEYHHHHDEVFT
SKCDRVRQLFILSSALLGVTLLSSFIV
>Mature_107_residues
MISGDTILFALMVVTCVNWARYFTALRTLIYIMREAHPLLYQQVDGGGFFTTHGNMTKQVRLFSYIKSKEYHHHHDEVFT
SKCDRVRQLFILSSALLGVTLLSSFIV

Specific function: Not Known. Overexpression Of Uspb Causes Cell Death In Stationary Phase, Whereas Mutants Of Uspb Are Sensitive To Exposure To Ethanol But Not Heat In Stationary Phase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein B family

Homologues:

Organism=Escherichia coli, GI1789908, Length=103, Percent_Identity=54.3689320388349, Blast_Score=119, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): USPB_VIBSL (B7VHB5)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002415779.1
- GeneID:   7159767
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_0092
- HOGENOM:   HBG303496
- OMA:   CERVRGQ
- ProtClustDB:   PRK04960
- HAMAP:   MF_01088
- InterPro:   IPR019598

Pfam domain/function: PF10625 UspB

EC number: NA

Molecular weight: Translated: 12347; Mature: 12347

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x18502290)-; HASH(0x195219e8)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGDTILFALMVVTCVNWARYFTALRTLIYIMREAHPLLYQQVDGGGFFTTHGNMTKQV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCEEEEECCCCHHHH
RLFSYIKSKEYHHHHDEVFTSKCDRVRQLFILSSALLGVTLLSSFIV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MISGDTILFALMVVTCVNWARYFTALRTLIYIMREAHPLLYQQVDGGGFFTTHGNMTKQV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCEEEEECCCCHHHH
RLFSYIKSKEYHHHHDEVFTSKCDRVRQLFILSSALLGVTLLSSFIV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA