| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yhiN [H]
Identifier: 218708160
GI number: 218708160
Start: 86134
End: 87327
Strand: Direct
Name: yhiN [H]
Synonym: VS_0094
Alternate gene names: 218708160
Gene position: 86134-87327 (Clockwise)
Preceding gene: 218708158
Following gene: 218708161
Centisome position: 2.61
GC content: 47.15
Gene sequence:
>1194_bases ATGAGTGAAAAATTTGATGTAATCGTAATTGGTGCGGGTGCCGCGGGCTTAATGTGTGCTGCGGAAGCGGGCAAACGCGG CCGACGAGTGCTGGTGGTTGATCATGCAAAGAAACCAGGCAGAAAAATTTTAATCTCAGGTGGCGGCCGTTGTAACTTCA CTAACTATGATGTTTCAGCCAACAACTTCCTGTGTAACAACCCTCATTTCGTGAAGTCAGCTTTATCTCAATACACTAAC TGGGATTTTATCTCGATGGTGAGCAAGTACGGCATTGAGTTCGAAGAGCGCGATCACGGTCAGTTGTTCTGTGTGAATGA CCACACAGCAAAAGACATCGTGAGCATGCTGCTTGACGAGTGTAAGCAAGCGAAAGTCGAACAACGCTACCGTTGTGATG TTCACTCCATCGAAAAAACAGACGCTGGCTTCAAGATGCACCTCAATACCGACGAAGTTGAGTGTGACTCACTCGTTGTA GCGACAGGCGGTTTGTCTATGCCTAAGCTAGGCGCAACGCCATTTGGCTATAAGATTGCAGAGCATTTTGGTTTGTCTGT AATGCCGACTACGGCGGCGCTAGTACCATTCACGCTCCATAAAGAAGACAAAGAAGCTTTCGCTGAGCTTTCTGGTATCG CAATTCCTGCTGAAATCACAGCGCAAGACGGCACTTTATTTAAAGAAGCGTTGCTGTTTACGCACCGCGGCTTATCTGGT CCTTCGGTACTGCAAATCTCTTCATTCTGGAAAGCGGGTCAATCGGTTTCTATCAACCTAGTACCTGAAGTAGACCTTGC CGAGTTGCTTGAAAATTCTCGCGAGAAACACCCTAATCAGAGCCTGAAAAATACCTTGGCGAAAGCACTACCAAAGCGTT TTGTGGAAGTGCTGATTGATCGTAAAGAGCTTGAAGACAAGCCGCTTAAACAGTTCAATGAAAAGCAGCTTAGTGGTATC GTTGAGCACCTAGAGAACTGGAAAATTGCACCAAATGGCACTGAAGGTTATCGAACTGCCGAAGTGACTCTAGGCGGAGT GGATACTGATCACCTATCTTCGAAAACCATGGAGTGTAAGAGTGTGCCTGGCCTCTACTTTATCGGTGAAGTAATGGACG TAACGGGTTGGTTAGGGGGTTATAACTTCCAATGGACGTGGTCGTCTGGGTGGGTTGCAGGCCAAAACGTATAG
Upstream 100 bases:
>100_bases AATTAGTAAGGATGTGCTGTTTATGCACATCCTTTTTTATTGATGGCATTTCGAGAACAGGGCGTACTCGGGCTGCACAA GTGAAGAAAAGCAGAACCAC
Downstream 100 bases:
>100_bases CATACTGTCGATAGCACTGGCTAAGCTTATTCATTTAGAACATTTTCAGTCAGTAGAAAGAATGACTTCGTCACAAATGA TAAAGATTATAAGTGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSEKFDVIVIGAGAAGLMCAAEAGKRGRRVLVVDHAKKPGRKILISGGGRCNFTNYDVSANNFLCNNPHFVKSALSQYTN WDFISMVSKYGIEFEERDHGQLFCVNDHTAKDIVSMLLDECKQAKVEQRYRCDVHSIEKTDAGFKMHLNTDEVECDSLVV ATGGLSMPKLGATPFGYKIAEHFGLSVMPTTAALVPFTLHKEDKEAFAELSGIAIPAEITAQDGTLFKEALLFTHRGLSG PSVLQISSFWKAGQSVSINLVPEVDLAELLENSREKHPNQSLKNTLAKALPKRFVEVLIDRKELEDKPLKQFNEKQLSGI VEHLENWKIAPNGTEGYRTAEVTLGGVDTDHLSSKTMECKSVPGLYFIGEVMDVTGWLGGYNFQWTWSSGWVAGQNV
Sequences:
>Translated_397_residues MSEKFDVIVIGAGAAGLMCAAEAGKRGRRVLVVDHAKKPGRKILISGGGRCNFTNYDVSANNFLCNNPHFVKSALSQYTN WDFISMVSKYGIEFEERDHGQLFCVNDHTAKDIVSMLLDECKQAKVEQRYRCDVHSIEKTDAGFKMHLNTDEVECDSLVV ATGGLSMPKLGATPFGYKIAEHFGLSVMPTTAALVPFTLHKEDKEAFAELSGIAIPAEITAQDGTLFKEALLFTHRGLSG PSVLQISSFWKAGQSVSINLVPEVDLAELLENSREKHPNQSLKNTLAKALPKRFVEVLIDRKELEDKPLKQFNEKQLSGI VEHLENWKIAPNGTEGYRTAEVTLGGVDTDHLSSKTMECKSVPGLYFIGEVMDVTGWLGGYNFQWTWSSGWVAGQNV >Mature_396_residues SEKFDVIVIGAGAAGLMCAAEAGKRGRRVLVVDHAKKPGRKILISGGGRCNFTNYDVSANNFLCNNPHFVKSALSQYTNW DFISMVSKYGIEFEERDHGQLFCVNDHTAKDIVSMLLDECKQAKVEQRYRCDVHSIEKTDAGFKMHLNTDEVECDSLVVA TGGLSMPKLGATPFGYKIAEHFGLSVMPTTAALVPFTLHKEDKEAFAELSGIAIPAEITAQDGTLFKEALLFTHRGLSGP SVLQISSFWKAGQSVSINLVPEVDLAELLENSREKHPNQSLKNTLAKALPKRFVEVLIDRKELEDKPLKQFNEKQLSGIV EHLENWKIAPNGTEGYRTAEVTLGGVDTDHLSSKTMECKSVPGLYFIGEVMDVTGWLGGYNFQWTWSSGWVAGQNV
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=395, Percent_Identity=61.2658227848101, Blast_Score=497, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 43792; Mature: 43661
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKFDVIVIGAGAAGLMCAAEAGKRGRRVLVVDHAKKPGRKILISGGGRCNFTNYDVSA CCCCEEEEEEECCCHHHHEEHHCCCCCCEEEEEECCCCCCCEEEEECCCEEECEECCCCC NNFLCNNPHFVKSALSQYTNWDFISMVSKYGIEFEERDHGQLFCVNDHTAKDIVSMLLDE CCEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCEEEECCCCHHHHHHHHHHH CKQAKVEQRYRCDVHSIEKTDAGFKMHLNTDEVECDSLVVATGGLSMPKLGATPFGYKIA HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHH EHFGLSVMPTTAALVPFTLHKEDKEAFAELSGIAIPAEITAQDGTLFKEALLFTHRGLSG HHCCCEEECCHHHHEEEEECCCHHHHHHHHCCCEECCEEECCCCHHHHHHHHHHHCCCCC PSVLQISSFWKAGQSVSINLVPEVDLAELLENSREKHPNQSLKNTLAKALPKRFVEVLID CCEEEEHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RKELEDKPLKQFNEKQLSGIVEHLENWKIAPNGTEGYRTAEVTLGGVDTDHLSSKTMECK HHHCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEEEECCCCHHHHCCCCCHHH SVPGLYFIGEVMDVTGWLGGYNFQWTWSSGWVAGQNV CCCCEEEHHHHHHHHHHHCCCCEEEEECCCEEECCCC >Mature Secondary Structure SEKFDVIVIGAGAAGLMCAAEAGKRGRRVLVVDHAKKPGRKILISGGGRCNFTNYDVSA CCCEEEEEEECCCHHHHEEHHCCCCCCEEEEEECCCCCCCEEEEECCCEEECEECCCCC NNFLCNNPHFVKSALSQYTNWDFISMVSKYGIEFEERDHGQLFCVNDHTAKDIVSMLLDE CCEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCEEEECCCCHHHHHHHHHHH CKQAKVEQRYRCDVHSIEKTDAGFKMHLNTDEVECDSLVVATGGLSMPKLGATPFGYKIA HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHH EHFGLSVMPTTAALVPFTLHKEDKEAFAELSGIAIPAEITAQDGTLFKEALLFTHRGLSG HHCCCEEECCHHHHEEEEECCCHHHHHHHHCCCEECCEEECCCCHHHHHHHHHHHCCCCC PSVLQISSFWKAGQSVSINLVPEVDLAELLENSREKHPNQSLKNTLAKALPKRFVEVLID CCEEEEHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RKELEDKPLKQFNEKQLSGIVEHLENWKIAPNGTEGYRTAEVTLGGVDTDHLSSKTMECK HHHCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEEEECCCCHHHHCCCCCHHH SVPGLYFIGEVMDVTGWLGGYNFQWTWSSGWVAGQNV CCCCEEEHHHHHHHHHHHCCCCEEEEECCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]