| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is ftnA [H]
Identifier: 218708157
GI number: 218708157
Start: 84964
End: 85491
Strand: Direct
Name: ftnA [H]
Synonym: VS_0091
Alternate gene names: 218708157
Gene position: 84964-85491 (Clockwise)
Preceding gene: 218708154
Following gene: 218708158
Centisome position: 2.58
GC content: 40.34
Gene sequence:
>528_bases ATGCTATCAAAAACTATGGTAGAGCAACTGAACGATCAAATTAATCTAGAATTTTTCTCATCCAACCTATACTTACAAAT GAGTGCTTGGTGTGAAGACAAAGGATTTGAAGGTGCAGCAGAGTTTCTGCGTGTTCATGCAGTAGAAGAAATGGAACACA TGCAGCGTCTTTTTACTTACGTAAGTGAGACAGGTGCAATGCCAATTTTAGGTGCGATTGAAGCGCCAAAACATGAATTT GATAGCCTTGGGGCTGTGTTCCGTGAAACTTACGAACATGAGCAAATGATTACTCAAAAGATCAACAAACTGGCTCACGT TGCTTTCAGCACACAAGATTACTCAACCTTTAACTTCCTGCAATGGTACGTTGCAGAGCAACACGAAGAAGAGAAGTTGT TTAAAGGTGTATTGGATAAGCTAGAGCTTGTTGGTGAAGACGGTAAAGCACTGTTCTTTATTGATAAAGACCTAGCGCAA TTGGCAAAAGATGGTTCATCTTCAATTATGGAAGCTCCTGCCGTTTAG
Upstream 100 bases:
>100_bases CGTAATGTTTGCTCGAAATATTGGTTAACTAATGGCCTGCGAGATATTCATAAAATAGTGATATAGTAGAGAAAACTGAA GATGTAATTAGGAGTCTTAA
Downstream 100 bases:
>100_bases GTAGTACGAGAAAGACACTGATTATCTTTTTCTTTTGAGTTTTCTTATGAAGATGTAAGGAGGAAAGGATGATCAGCGGC GACACTATTCTATTTGCACT
Product: Ferritin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLSKTMVEQLNDQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRVHAVEEMEHMQRLFTYVSETGAMPILGAIEAPKHEF DSLGAVFRETYEHEQMITQKINKLAHVAFSTQDYSTFNFLQWYVAEQHEEEKLFKGVLDKLELVGEDGKALFFIDKDLAQ LAKDGSSSIMEAPAV
Sequences:
>Translated_175_residues MLSKTMVEQLNDQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRVHAVEEMEHMQRLFTYVSETGAMPILGAIEAPKHEF DSLGAVFRETYEHEQMITQKINKLAHVAFSTQDYSTFNFLQWYVAEQHEEEKLFKGVLDKLELVGEDGKALFFIDKDLAQ LAKDGSSSIMEAPAV >Mature_175_residues MLSKTMVEQLNDQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRVHAVEEMEHMQRLFTYVSETGAMPILGAIEAPKHEF DSLGAVFRETYEHEQMITQKINKLAHVAFSTQDYSTFNFLQWYVAEQHEEEKLFKGVLDKLELVGEDGKALFFIDKDLAQ LAKDGSSSIMEAPAV
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=161, Percent_Identity=62.111801242236, Blast_Score=219, Evalue=8e-59, Organism=Escherichia coli, GI1788212, Length=142, Percent_Identity=35.9154929577465, Blast_Score=102, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 20001; Mature: 20001
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKTMVEQLNDQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRVHAVEEMEHMQRLFTY CCCHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VSETGAMPILGAIEAPKHEFDSLGAVFRETYEHEQMITQKINKLAHVAFSTQDYSTFNFL HHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH QWYVAEQHEEEKLFKGVLDKLELVGEDGKALFFIDKDLAQLAKDGSSSIMEAPAV HHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCHHHCCCCC >Mature Secondary Structure MLSKTMVEQLNDQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRVHAVEEMEHMQRLFTY CCCHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VSETGAMPILGAIEAPKHEFDSLGAVFRETYEHEQMITQKINKLAHVAFSTQDYSTFNFL HHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH QWYVAEQHEEEKLFKGVLDKLELVGEDGKALFFIDKDLAQLAKDGSSSIMEAPAV HHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]