Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is ftnA [H]

Identifier: 218708157

GI number: 218708157

Start: 84964

End: 85491

Strand: Direct

Name: ftnA [H]

Synonym: VS_0091

Alternate gene names: 218708157

Gene position: 84964-85491 (Clockwise)

Preceding gene: 218708154

Following gene: 218708158

Centisome position: 2.58

GC content: 40.34

Gene sequence:

>528_bases
ATGCTATCAAAAACTATGGTAGAGCAACTGAACGATCAAATTAATCTAGAATTTTTCTCATCCAACCTATACTTACAAAT
GAGTGCTTGGTGTGAAGACAAAGGATTTGAAGGTGCAGCAGAGTTTCTGCGTGTTCATGCAGTAGAAGAAATGGAACACA
TGCAGCGTCTTTTTACTTACGTAAGTGAGACAGGTGCAATGCCAATTTTAGGTGCGATTGAAGCGCCAAAACATGAATTT
GATAGCCTTGGGGCTGTGTTCCGTGAAACTTACGAACATGAGCAAATGATTACTCAAAAGATCAACAAACTGGCTCACGT
TGCTTTCAGCACACAAGATTACTCAACCTTTAACTTCCTGCAATGGTACGTTGCAGAGCAACACGAAGAAGAGAAGTTGT
TTAAAGGTGTATTGGATAAGCTAGAGCTTGTTGGTGAAGACGGTAAAGCACTGTTCTTTATTGATAAAGACCTAGCGCAA
TTGGCAAAAGATGGTTCATCTTCAATTATGGAAGCTCCTGCCGTTTAG

Upstream 100 bases:

>100_bases
CGTAATGTTTGCTCGAAATATTGGTTAACTAATGGCCTGCGAGATATTCATAAAATAGTGATATAGTAGAGAAAACTGAA
GATGTAATTAGGAGTCTTAA

Downstream 100 bases:

>100_bases
GTAGTACGAGAAAGACACTGATTATCTTTTTCTTTTGAGTTTTCTTATGAAGATGTAAGGAGGAAAGGATGATCAGCGGC
GACACTATTCTATTTGCACT

Product: Ferritin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLSKTMVEQLNDQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRVHAVEEMEHMQRLFTYVSETGAMPILGAIEAPKHEF
DSLGAVFRETYEHEQMITQKINKLAHVAFSTQDYSTFNFLQWYVAEQHEEEKLFKGVLDKLELVGEDGKALFFIDKDLAQ
LAKDGSSSIMEAPAV

Sequences:

>Translated_175_residues
MLSKTMVEQLNDQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRVHAVEEMEHMQRLFTYVSETGAMPILGAIEAPKHEF
DSLGAVFRETYEHEQMITQKINKLAHVAFSTQDYSTFNFLQWYVAEQHEEEKLFKGVLDKLELVGEDGKALFFIDKDLAQ
LAKDGSSSIMEAPAV
>Mature_175_residues
MLSKTMVEQLNDQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRVHAVEEMEHMQRLFTYVSETGAMPILGAIEAPKHEF
DSLGAVFRETYEHEQMITQKINKLAHVAFSTQDYSTFNFLQWYVAEQHEEEKLFKGVLDKLELVGEDGKALFFIDKDLAQ
LAKDGSSSIMEAPAV

Specific function: Iron-storage protein [H]

COG id: COG1528

COG function: function code P; Ferritin-like protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

Organism=Escherichia coli, GI1788216, Length=161, Percent_Identity=62.111801242236, Blast_Score=219, Evalue=8e-59,
Organism=Escherichia coli, GI1788212, Length=142, Percent_Identity=35.9154929577465, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- InterPro:   IPR001519 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: =1.16.3.1 [H]

Molecular weight: Translated: 20001; Mature: 20001

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKTMVEQLNDQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRVHAVEEMEHMQRLFTY
CCCHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VSETGAMPILGAIEAPKHEFDSLGAVFRETYEHEQMITQKINKLAHVAFSTQDYSTFNFL
HHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QWYVAEQHEEEKLFKGVLDKLELVGEDGKALFFIDKDLAQLAKDGSSSIMEAPAV
HHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCHHHCCCCC
>Mature Secondary Structure
MLSKTMVEQLNDQINLEFFSSNLYLQMSAWCEDKGFEGAAEFLRVHAVEEMEHMQRLFTY
CCCHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VSETGAMPILGAIEAPKHEFDSLGAVFRETYEHEQMITQKINKLAHVAFSTQDYSTFNFL
HHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QWYVAEQHEEEKLFKGVLDKLELVGEDGKALFFIDKDLAQLAKDGSSSIMEAPAV
HHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]