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The map label for this gene is ygiL

Identifier: 218701817

GI number: 218701817

Start: 3691059

End: 3691610

Strand: Direct

Name: ygiL

Synonym: ECIAI39_3540

Alternate gene names: 218701817

Gene position: 3691059-3691610 (Clockwise)

Preceding gene: 218701816

Following gene: 218701818

Centisome position: 71.92

GC content: 44.38

Gene sequence:

>552_bases
ATGTCTGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTATTTGCTGATGAAGGTCA
CGGCATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCAATTAAACCTGGTGACGAAGATTTAACTGTAAATC
TGGGTGAAGTAGCAGATACCGTACTGAAAAGCGGTCAAAAATCTTTGGCTGAACCTTTCACTATTCATCTGCAAGACTGC
ATGCTGAGCCAGAGCGGAACAACTTACTCTAAAGCGAAGGTTACTTTCACCACAGCGAATACCATGACGGGTCAGTCTGA
CCTGCTGAAAAATACCAAAGAAACTGAAATCGGCGGCGCTACTGGCGTTGGCGTACGTATTCTGGACAGCCAGAGCGGCG
AAGTAACTTTAGGTACTCCAGTGTTAATTGCCTTCAACGGCACCAACAGCTATCAGGAACTGAACTTCAAAGCTCGTATG
GAATCCCCGAGCAAAGATGCTACTCCGGGCAACGTTTACGCTCAGGCTGACTATAAGATTGCTTACGAGTAA

Upstream 100 bases:

>100_bases
AAAATCAGAAAACAAAATATAATATTTCAATGATTGGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTTTACTTA
TCTTTATATAAAGGAATATT

Downstream 100 bases:

>100_bases
TCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGAAACAGATGTATAAAAATTTAAAGCTT
ACGACAATAAGTAAAATGAT

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSGQKSLAEPFTIHLQDC
MLSQSGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVLIAFNGTNSYQELNFKARM
ESPSKDATPGNVYAQADYKIAYE

Sequences:

>Translated_183_residues
MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSGQKSLAEPFTIHLQDC
MLSQSGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVLIAFNGTNSYQELNFKARM
ESPSKDATPGNVYAQADYKIAYE
>Mature_182_residues
SAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSGQKSLAEPFTIHLQDCM
LSQSGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVLIAFNGTNSYQELNFKARME
SPSKDATPGNVYAQADYKIAYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1789422, Length=183, Percent_Identity=97.2677595628415, Blast_Score=364, Evalue=1e-102,
Organism=Escherichia coli, GI1786938, Length=187, Percent_Identity=38.5026737967914, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1790769, Length=137, Percent_Identity=36.4963503649635, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI87082421, Length=157, Percent_Identity=26.1146496815287, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19393; Mature: 19262

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADT
CCHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCEEEECCCCCCCCCCCEEEEHHHHHHH
VLKSGQKSLAEPFTIHLQDCMLSQSGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGA
HHHCCHHHHCCCEEEEEEHHEECCCCCEEEEEEEEEEECCCCCCCHHHHCCCCCCCCCCC
TGVGVRILDSQSGEVTLGTPVLIAFNGTNSYQELNFKARMESPSKDATPGNVYAQADYKI
CCCEEEEEECCCCCEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEE
AYE
EEC
>Mature Secondary Structure 
SAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADT
CHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCEEEECCCCCCCCCCCEEEEHHHHHHH
VLKSGQKSLAEPFTIHLQDCMLSQSGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGA
HHHCCHHHHCCCEEEEEEHHEECCCCCEEEEEEEEEEECCCCCCCHHHHCCCCCCCCCCC
TGVGVRILDSQSGEVTLGTPVLIAFNGTNSYQELNFKARMESPSKDATPGNVYAQADYKI
CCCEEEEEECCCCCEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEE
AYE
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1917833; 7984428 [H]