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The map label for this gene is yqiH

Identifier: 218701818

GI number: 218701818

Start: 3694190

End: 3694939

Strand: Direct

Name: yqiH

Synonym: ECIAI39_3543

Alternate gene names: 218701818

Gene position: 3694190-3694939 (Clockwise)

Preceding gene: 218701817

Following gene: 218701819

Centisome position: 71.98

GC content: 39.07

Gene sequence:

>750_bases
ATGCGCTACTTAAATACAAAGAATATCATTGCAGCAGGAGTATTACTCTCCTGTATGAGCAGCATTGCCTGGGGTGCCAT
CATCCCGGATCGTACTCGTATCATAATGAATGAGTCAGATAAAGGCGAAGCATTAAAACTTACTAATCAAAGTAAAAACC
TGCCCTATCTGGCCCAAACATGGATTGAAGATACGAAAGGCAATAAATCGCGTGACTTTATTGTCACTGTTCCTCCTATG
GTGCGTTTAAATCCCAGCGAGCAAATTCAAATAAGAATGATAACTCAAGAAAAAATTGCTCAACTTCCTAAAGACAGAGA
AACGCTCTTCTATTTTAACGTGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACG
CATTGAAACTATTCTGGCGGCCAAAAGCCATTGAATTAGAAGACGATGGGGTAATGACTTACGAAAAAGTTGAAATCATC
CGTAGAAATGATGGTTCGATCCGCTTTAACAATAAAATGCCTTATCACGTTACGCTGGGTTATATCGGAACAAATGGGGT
AACGATGTTACCACAAACGCAAAGCTTAATGGTAACCCCTTTTAGCCATGCAGATACGCAGTTTAAAAATGTTCCGTCAG
CTTTTCAGGTGGGTTATATCAATGACTTTGGTGGATTAAGTTTTTATGAAATAAACTGCCCAACGGTAAATAATTCTTGT
AATGTTTCCGTAGCCAAACAAGGTCAATAA

Upstream 100 bases:

>100_bases
TGACAAATCTTGCTTTATTCAACCACCCAAGAGCAGCAACTTAACCACCGGAACGGTTATTTTACCGTGTATTAGCCAAA
ATTAATTCAGGATGAAACTA

Downstream 100 bases:

>100_bases
TATGCGCTACTTGTTAATTGTAGTTACATTTATTATGAGTTTTAGTGTGTTACCTGTATGGACAATGGACTGCTATGCCG
AGCACGAAGGTGGAAATACC

Product: periplasmic pilin chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRYLNTKNIIAAGVLLSCMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQTWIEDTKGNKSRDFIVTVPPM
VRLNPSEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEII
RRNDGSIRFNNKMPYHVTLGYIGTNGVTMLPQTQSLMVTPFSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC
NVSVAKQGQ

Sequences:

>Translated_249_residues
MRYLNTKNIIAAGVLLSCMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQTWIEDTKGNKSRDFIVTVPPM
VRLNPSEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEII
RRNDGSIRFNNKMPYHVTLGYIGTNGVTMLPQTQSLMVTPFSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC
NVSVAKQGQ
>Mature_249_residues
MRYLNTKNIIAAGVLLSCMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQTWIEDTKGNKSRDFIVTVPPM
VRLNPSEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEII
RRNDGSIRFNNKMPYHVTLGYIGTNGVTMLPQTQSLMVTPFSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC
NVSVAKQGQ

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI87082203, Length=249, Percent_Identity=96.3855421686747, Blast_Score=503, Evalue=1e-144,
Organism=Escherichia coli, GI1786936, Length=216, Percent_Identity=41.2037037037037, Blast_Score=181, Evalue=4e-47,
Organism=Escherichia coli, GI1788677, Length=223, Percent_Identity=38.5650224215247, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1787171, Length=246, Percent_Identity=32.1138211382114, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1789532, Length=223, Percent_Identity=30.0448430493274, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790771, Length=212, Percent_Identity=31.1320754716981, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786333, Length=241, Percent_Identity=27.8008298755187, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786743, Length=170, Percent_Identity=32.9411764705882, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1788428, Length=237, Percent_Identity=27.4261603375527, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87081806, Length=128, Percent_Identity=31.25, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 28327; Mature: 28327

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLNTKNIIAAGVLLSCMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQT
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHH
WIEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPK
HHHHCCCCCCCCEEEECCCEEEECCCCEEEEEEECHHHHHCCCCCCCEEEEEEEEECCCC
TDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEIIRRNDGSIRFNNKMPYHVTLG
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEEECCCCEEECCCCCEEEEEE
YIGTNGVTMLPQTQSLMVTPFSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC
EECCCCEEECCCCCEEEEEECCCCCCHHHCCCCEEEEEEEECCCCEEEEEEECCCCCCCC
NVSVAKQGQ
CEEEEECCC
>Mature Secondary Structure
MRYLNTKNIIAAGVLLSCMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQT
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHH
WIEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPK
HHHHCCCCCCCCEEEECCCEEEECCCCEEEEEEECHHHHHCCCCCCCEEEEEEEEECCCC
TDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEIIRRNDGSIRFNNKMPYHVTLG
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEEECCCCEEECCCCCEEEEEE
YIGTNGVTMLPQTQSLMVTPFSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC
EECCCCEEECCCCCEEEEEECCCCCCHHHCCCCEEEEEEEECCCCEEEEEEECCCCCCCC
NVSVAKQGQ
CEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]