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The map label for this gene is yiiZ [H]

Identifier: 218691312

GI number: 218691312

Start: 3597935

End: 3598918

Strand: Direct

Name: yiiZ [H]

Synonym: ECED1_3672

Alternate gene names: 218691312

Gene position: 3597935-3598918 (Clockwise)

Preceding gene: 218691311

Following gene: 218691313

Centisome position: 69.06

GC content: 41.87

Gene sequence:

>984_bases
ATGAAAGCACTTCGTCCTCTGACGGCATCGCTTATGCTGTTAACCAGTTGTTTATTAATATCTAATACCACACTGGCAAA
AACAACATTAAAACTGAGTCATAATCAGGATAAAAGCCATGCTGTCCATAAAGCATTAAGCTATTTAGCGGATAAAACCA
AAGAGTATTCTAATGGTGAATTAGTTATTCGCATTTATCCAAATGCGACATTAGGTAATGAGCGTGAATCACTGGAATTA
ATGAACTCCGGTGCATTACAGATGGTTAAGGTTAATGCCGCATCACTAGAATCATTTGCTCCGGATTACAGCCTTTTCAG
TCTGCCGTTCTTATTCCGCGACCGTGATCACTATTATCGTGTTCTGCAAAGTGATTTAGGTAAAAAAATACTTAATTCAT
CAGAAAGCAAAGGTTTTGTTGGTATTACGTACTATGACGGTGGTGCGAGAAGTTTTTATTCCAATAAACCGATTACAAAA
CCTGAAGATTTAGCGGGAATGAAAATCAGGGTTCAACAAAGCCCCAGCGCCATTGCAATGATGAAAGCACTCGGTGGTGT
CGCTACCCCGATGGCGCAAGGCGAACTCTACACCGCACTTCAGCAAGGAGTGGTTGATGGCGGAGAGAACAATACCGTTG
TCTATGCCGATATGCGTCACGCCGAAGTCGCAAAAGTCTATTCACGTGATGAACACACCATGGTACCTGATGTGTTAATT
ATCAGCACCGACGTGTTGAATAAACTTGGTGATAAAGAGCGCACGGCATTATTAAAAGCAGCCGATGAGTCAATGATGCA
GATGAAGGACGTCATTTGGCCTGCGGCTGAAAAAGAAGCCTACGACAAAATGAAAGGGATGAACGCAACAGTTGTTGATG
TTGATAAATCCGCTTTCAAAGAACGCGTCAAACCGTTATACGATGAATTCAAGGCGAAAGATGCACAATCAGCCAAAAAC
CTTGAGCTAGTAGAAAGTATGTAA

Upstream 100 bases:

>100_bases
AATATTCCATTATCTGGCAGAGAATTAATCACTATTTTTTATTATAACGATAGAAAAGCGCTGTATTTATCGTTTCTGTT
ATATTAACCAGGAGCAGGAT

Downstream 100 bases:

>100_bases
CCCTAATGGGCAGGTAATTCCTGCCTTTTCATGGAAGACTTATGCGAACACTCACTCATATTCTTAATAAGATCCTTGCC
GGATGTTGCTGCATTATTCT

Product: putative c4-dicarboxylate transport system binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKALRPLTASLMLLTSCLLISNTTLAKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGELVIRIYPNATLGNERESLEL
MNSGALQMVKVNAASLESFAPDYSLFSLPFLFRDRDHYYRVLQSDLGKKILNSSESKGFVGITYYDGGARSFYSNKPITK
PEDLAGMKIRVQQSPSAIAMMKALGGVATPMAQGELYTALQQGVVDGGENNTVVYADMRHAEVAKVYSRDEHTMVPDVLI
ISTDVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFKERVKPLYDEFKAKDAQSAKN
LELVESM

Sequences:

>Translated_327_residues
MKALRPLTASLMLLTSCLLISNTTLAKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGELVIRIYPNATLGNERESLEL
MNSGALQMVKVNAASLESFAPDYSLFSLPFLFRDRDHYYRVLQSDLGKKILNSSESKGFVGITYYDGGARSFYSNKPITK
PEDLAGMKIRVQQSPSAIAMMKALGGVATPMAQGELYTALQQGVVDGGENNTVVYADMRHAEVAKVYSRDEHTMVPDVLI
ISTDVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFKERVKPLYDEFKAKDAQSAKN
LELVESM
>Mature_327_residues
MKALRPLTASLMLLTSCLLISNTTLAKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGELVIRIYPNATLGNERESLEL
MNSGALQMVKVNAASLESFAPDYSLFSLPFLFRDRDHYYRVLQSDLGKKILNSSESKGFVGITYYDGGARSFYSNKPITK
PEDLAGMKIRVQQSPSAIAMMKALGGVATPMAQGELYTALQQGVVDGGENNTVVYADMRHAEVAKVYSRDEHTMVPDVLI
ISTDVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFKERVKPLYDEFKAKDAQSAKN
LELVESM

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=320, Percent_Identity=26.875, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36213; Mature: 36213

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALRPLTASLMLLTSCLLISNTTLAKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGE
CCCCHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCE
LVIRIYPNATLGNERESLELMNSGALQMVKVNAASLESFAPDYSLFSLPFLFRDRDHYYR
EEEEECCCCCCCCCHHHHHHHCCCCEEEEEECHHHHHHCCCCCHHHCCCHHHCCCHHHHH
VLQSDLGKKILNSSESKGFVGITYYDGGARSFYSNKPITKPEDLAGMKIRVQQSPSAIAM
HHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCCEEEEECCCHHHHH
MKALGGVATPMAQGELYTALQQGVVDGGENNTVVYADMRHAEVAKVYSRDEHTMVPDVLI
HHHHCCCCCCHHCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCEE
ISTDVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFK
EEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCHHHHH
ERVKPLYDEFKAKDAQSAKNLELVESM
HHHHHHHHHHHCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MKALRPLTASLMLLTSCLLISNTTLAKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGE
CCCCHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCE
LVIRIYPNATLGNERESLELMNSGALQMVKVNAASLESFAPDYSLFSLPFLFRDRDHYYR
EEEEECCCCCCCCCHHHHHHHCCCCEEEEEECHHHHHHCCCCCHHHCCCHHHCCCHHHHH
VLQSDLGKKILNSSESKGFVGITYYDGGARSFYSNKPITKPEDLAGMKIRVQQSPSAIAM
HHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCCEEEEECCCHHHHH
MKALGGVATPMAQGELYTALQQGVVDGGENNTVVYADMRHAEVAKVYSRDEHTMVPDVLI
HHHHCCCCCCHHCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCEE
ISTDVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFK
EEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCHHHHH
ERVKPLYDEFKAKDAQSAKNLELVESM
HHHHHHHHHHHCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]