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The map label for this gene is 218691313

Identifier: 218691313

GI number: 218691313

Start: 3598960

End: 3599442

Strand: Direct

Name: 218691313

Synonym: ECED1_3673

Alternate gene names: NA

Gene position: 3598960-3599442 (Clockwise)

Preceding gene: 218691312

Following gene: 218691314

Centisome position: 69.08

GC content: 38.51

Gene sequence:

>483_bases
ATGCGAACACTCACTCATATTCTTAATAAGATCCTTGCCGGATGTTGCTGCATTATTCTCGCCATTATGGTGTTCTGCGT
AACCTGGCAAGTTATTGCACGTTTTATTTTTAACGCTCCCAGCACTGTGCTTGATGAGTTCACCCAGATTTTATTTATGT
GGATGATTTTGCTTGGCGGTGTATATACTGCGGGTTTAAAAAAACATCTGGCCATTGATTTGTTGGCTCAAAAACTTCCG
GCTGCATCTGTTCTGACGCTTGACAGTTTTATCCAAATTATTATTACGGTCTTTGCGGTTATTTTCATGATCTATGGCGG
GAATATTGTTGTTGAAAAAGCACAACATGTTGGACAAATCTCTCCAGTATTAAAATGGCCAATGGATAAAGTATATTGGG
TTATGCCTGTCAGTGGGCTTATTCTGGTCTGGTATTCAGTAATGAATATTATTGACAACTATCGTAAACGGAATTCTCAT
TAA

Upstream 100 bases:

>100_bases
AATTCAAGGCGAAAGATGCACAATCAGCCAAAAACCTTGAGCTAGTAGAAAGTATGTAACCCTAATGGGCAGGTAATTCC
TGCCTTTTCATGGAAGACTT

Downstream 100 bases:

>100_bases
CGAGGGAAATATGGAATTTGAATATATCTACCCCGTCTTAATTTTATTTGGCAGTTTTGCCGTCATGCTGGCAATAGGTG
TGCCAATTACTTTTGCGATT

Product: putative TRAP-type C4-dicarboxylate transport system small permease component

Products: NA

Alternate protein names: Tripartite ATP-Independent Periplasmic Transporter DctQ; TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transport System; Aspartate Kinase Monofunctional Class; TRAP Transporter Small Transmembrane Protein; 30S Ribosomal; Membrane Transporter; TRAP-Type C4-Dicarboxylate Transport System; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transport System Permease; TRAP Dicarboxylate Transporter DctQ Subunit; C4-Dicarboxylate Permease Small Protein; C4-Dicarboxylate Transporter Small Permease Component; ATP-Independent Transporter Subunit; Tripartite ATP-Independent Periplasmic Transporter; Inner Membrane Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRTLTHILNKILAGCCCIILAIMVFCVTWQVIARFIFNAPSTVLDEFTQILFMWMILLGGVYTAGLKKHLAIDLLAQKLP
AASVLTLDSFIQIIITVFAVIFMIYGGNIVVEKAQHVGQISPVLKWPMDKVYWVMPVSGLILVWYSVMNIIDNYRKRNSH

Sequences:

>Translated_160_residues
MRTLTHILNKILAGCCCIILAIMVFCVTWQVIARFIFNAPSTVLDEFTQILFMWMILLGGVYTAGLKKHLAIDLLAQKLP
AASVLTLDSFIQIIITVFAVIFMIYGGNIVVEKAQHVGQISPVLKWPMDKVYWVMPVSGLILVWYSVMNIIDNYRKRNSH
>Mature_160_residues
MRTLTHILNKILAGCCCIILAIMVFCVTWQVIARFIFNAPSTVLDEFTQILFMWMILLGGVYTAGLKKHLAIDLLAQKLP
AASVLTLDSFIQIIITVFAVIFMIYGGNIVVEKAQHVGQISPVLKWPMDKVYWVMPVSGLILVWYSVMNIIDNYRKRNSH

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18131; Mature: 18131

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLTHILNKILAGCCCIILAIMVFCVTWQVIARFIFNAPSTVLDEFTQILFMWMILLGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VYTAGLKKHLAIDLLAQKLPAASVLTLDSFIQIIITVFAVIFMIYGGNIVVEKAQHVGQI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SPVLKWPMDKVYWVMPVSGLILVWYSVMNIIDNYRKRNSH
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTLTHILNKILAGCCCIILAIMVFCVTWQVIARFIFNAPSTVLDEFTQILFMWMILLGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VYTAGLKKHLAIDLLAQKLPAASVLTLDSFIQIIITVFAVIFMIYGGNIVVEKAQHVGQI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SPVLKWPMDKVYWVMPVSGLILVWYSVMNIIDNYRKRNSH
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA