Click here to switch to the map view.

The map label for this gene is yjcS [H]

Identifier: 218551504

GI number: 218551504

Start: 4390054

End: 4392057

Strand: Direct

Name: yjcS [H]

Synonym: EFER_4287

Alternate gene names: 218551504

Gene position: 4390054-4392057 (Clockwise)

Preceding gene: 218551503

Following gene: 218551505

Centisome position: 95.67

GC content: 48.75

Gene sequence:

>2004_bases
ATGGAGATTAAGATGAATAACTCCCGGTTATTCCGTTTGAGCAGGGTTTTTATTGCGCTTACCGCCACTGGTGGGCTGCT
AATCAACAGTGTCAGTGCCAGTGCCAGCGAATCGACGCACAAGGCGTCTCAATATACTCAACAAATTAACCAGAATTACA
CAAACTCGCTGCCGTTCAATGATCGTCAGGATTTTGATGATGCACAACGCGGGTTTATCGCGCCATTGCTCGATCAGGGG
ATTTTGCGCACACCAGATGGCAAAGTGTACTACCGTGGCGAAGATTTTAAATTTGATCTCAATGCGCCAGCACCGGAAAC
CGTTAACCCAAGTTTGTGGCGCCAGTCGCAGTTAAACGGCATATCTGGTCTGTTTAAAGTCACCGACAAGATGTATCAGG
TTCGTGGTCAGGATATTTCCAACATTACCTTCATTGAAGGGGATACGGGCATCATCGTGATCGACCCGCTTGTTACGCCC
CCGGCCGCTAAAGCGGCATTTGATCTCTACTTACAGCATCGCCCACAGAAACCTATTGTGGCGGTGATTTATACCCATAG
TCATACCGACCATTATGGTGGTGTTAAAGGCCTGGTTTCAGAAGACGATGTTAAAGCCGGGAAAGTGCAGATCATCGCTC
CGGCAGGCTTTATGGATGAAGCGATTAGCGAAAACGTGATGGCCGGTAATATCATGAGCCGTCGCGCACTTTACTCCTAT
GGCCTGTTACTACCACGTAACCCCGAAGGTACTATTGGCAATGGTCTTGGTGTAACGCTGGTAACGGGTGATCCTTCAAT
TATTGCACCAACAATCACCATAACGAAAACCGGTGAAAAACGGATTATCGACGGTCTGGAGTTTGATTTCCTGATGGCAC
CAGGCAGTGAAGCGCCGTCAGAAATGCATCTCTATATTCCGGCACTGAAAGCGCTGTGTACCGCAGAGAACGCCACCCAT
ACGCTGCATAACTTCTACACTTTGCGTGGCGCTAAAACCCGTGATACCAGTAAGTGGACGGAATACCTTAATCAGACCCT
GGATATGTGGGGTAATGAAGCAGAAGTCTTGTTTATGCCGCATACCTGGCCGGTCTGGGGTAATAAACATATCAATGATT
ATGTAAGTAAATACCGCGACACCATCAAATACATTCATGACCAGACTCTGCATTTAGCCAACCAGGGCTACACCATGAAT
GAAATTGGCAACATGCTCAAGTTACCACCGTCACTGGCAAATAACTGGGCCAGCCGTGGTTATTACGGTTCTGTCAGCCA
TAATGCCCGTGCGGTGTATAACTTCTATCTGGGCTACTACGACGGTAACCCGGCGAATCTCAATCCATATGGTCAGGTGG
ATATGGGGCAACGCTATGTGAAAGCGCTGGGGGGTTCTGCCCGGGCCATTAACCTGGCGCAGGAAGCCTATAAACAGGGC
GATTACCGCTGGGCGGCAGAGCTGCTCAAGCAAGTGATCGCTGCGAATCCGGGTGATCAGGTAGCGAAAAATCTGCAGGC
TAATACCTTTGAGCAACTTGGTTATCAGGCGGAATCAGCCACCTGGCGTGGCTTCTACCTGACCGGAGCGAAAGAGCTGC
GTGAAGGCGTCCATAAATTCGCTCACGGCACCACCTACTCTCCAGATACCTTGAAAGGAATGTCGGTAGAGATGCTGTTC
GATTATATGGCCGTGCTTCTCAATAGCGAGAAAGCCGAAGGTAAGAGCGTCAATCTGAACTTCAATATGGATAATGGCGA
TAACCTGAACCTTACGCTTAATAACAGCGTGCTGAACTACCGACAAACCCTGCAACCAAACGCCGATGCTTCGTTCTATA
TCAGCCGAGCGGATCTGCATCAGGTCTTGACCGGGCAGGCAAAAATGGCCGATCTGATCAAAGCGAAGAAAGTGAAAGTG
ATTGGTAAAGCGGCGAAGCTGGATGAAATTTTTACCAGCCTCGATCAATTTGAGTTGTGGGTAAATATCGTTACACCAAA
TTAA

Upstream 100 bases:

>100_bases
GCTCACACTTCATTTTCTCAAAATGACATTCTCGCCTTTATTATAAGGCGAGGATATTTTTCATTTTGCCGCTTTAAATA
TTGATGCCATAAATAATTAA

Downstream 100 bases:

>100_bases
TTAGCGTATAGCTTCCGGGGGTGACCCCCGGAAGCGATTTTTTCAATAAATAGTTTTCACAAAACAATAATGTTAATGAA
TAAGTTCTGAATGCGGTAAA

Product: alkyl sulfatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MEIKMNNSRLFRLSRVFIALTATGGLLINSVSASASESTHKASQYTQQINQNYTNSLPFNDRQDFDDAQRGFIAPLLDQG
ILRTPDGKVYYRGEDFKFDLNAPAPETVNPSLWRQSQLNGISGLFKVTDKMYQVRGQDISNITFIEGDTGIIVIDPLVTP
PAAKAAFDLYLQHRPQKPIVAVIYTHSHTDHYGGVKGLVSEDDVKAGKVQIIAPAGFMDEAISENVMAGNIMSRRALYSY
GLLLPRNPEGTIGNGLGVTLVTGDPSIIAPTITITKTGEKRIIDGLEFDFLMAPGSEAPSEMHLYIPALKALCTAENATH
TLHNFYTLRGAKTRDTSKWTEYLNQTLDMWGNEAEVLFMPHTWPVWGNKHINDYVSKYRDTIKYIHDQTLHLANQGYTMN
EIGNMLKLPPSLANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLNPYGQVDMGQRYVKALGGSARAINLAQEAYKQG
DYRWAAELLKQVIAANPGDQVAKNLQANTFEQLGYQAESATWRGFYLTGAKELREGVHKFAHGTTYSPDTLKGMSVEMLF
DYMAVLLNSEKAEGKSVNLNFNMDNGDNLNLTLNNSVLNYRQTLQPNADASFYISRADLHQVLTGQAKMADLIKAKKVKV
IGKAAKLDEIFTSLDQFELWVNIVTPN

Sequences:

>Translated_667_residues
MEIKMNNSRLFRLSRVFIALTATGGLLINSVSASASESTHKASQYTQQINQNYTNSLPFNDRQDFDDAQRGFIAPLLDQG
ILRTPDGKVYYRGEDFKFDLNAPAPETVNPSLWRQSQLNGISGLFKVTDKMYQVRGQDISNITFIEGDTGIIVIDPLVTP
PAAKAAFDLYLQHRPQKPIVAVIYTHSHTDHYGGVKGLVSEDDVKAGKVQIIAPAGFMDEAISENVMAGNIMSRRALYSY
GLLLPRNPEGTIGNGLGVTLVTGDPSIIAPTITITKTGEKRIIDGLEFDFLMAPGSEAPSEMHLYIPALKALCTAENATH
TLHNFYTLRGAKTRDTSKWTEYLNQTLDMWGNEAEVLFMPHTWPVWGNKHINDYVSKYRDTIKYIHDQTLHLANQGYTMN
EIGNMLKLPPSLANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLNPYGQVDMGQRYVKALGGSARAINLAQEAYKQG
DYRWAAELLKQVIAANPGDQVAKNLQANTFEQLGYQAESATWRGFYLTGAKELREGVHKFAHGTTYSPDTLKGMSVEMLF
DYMAVLLNSEKAEGKSVNLNFNMDNGDNLNLTLNNSVLNYRQTLQPNADASFYISRADLHQVLTGQAKMADLIKAKKVKV
IGKAAKLDEIFTSLDQFELWVNIVTPN
>Mature_667_residues
MEIKMNNSRLFRLSRVFIALTATGGLLINSVSASASESTHKASQYTQQINQNYTNSLPFNDRQDFDDAQRGFIAPLLDQG
ILRTPDGKVYYRGEDFKFDLNAPAPETVNPSLWRQSQLNGISGLFKVTDKMYQVRGQDISNITFIEGDTGIIVIDPLVTP
PAAKAAFDLYLQHRPQKPIVAVIYTHSHTDHYGGVKGLVSEDDVKAGKVQIIAPAGFMDEAISENVMAGNIMSRRALYSY
GLLLPRNPEGTIGNGLGVTLVTGDPSIIAPTITITKTGEKRIIDGLEFDFLMAPGSEAPSEMHLYIPALKALCTAENATH
TLHNFYTLRGAKTRDTSKWTEYLNQTLDMWGNEAEVLFMPHTWPVWGNKHINDYVSKYRDTIKYIHDQTLHLANQGYTMN
EIGNMLKLPPSLANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLNPYGQVDMGQRYVKALGGSARAINLAQEAYKQG
DYRWAAELLKQVIAANPGDQVAKNLQANTFEQLGYQAESATWRGFYLTGAKELREGVHKFAHGTTYSPDTLKGMSVEMLF
DYMAVLLNSEKAEGKSVNLNFNMDNGDNLNLTLNNSVLNYRQTLQPNADASFYISRADLHQVLTGQAKMADLIKAKKVKV
IGKAAKLDEIFTSLDQFELWVNIVTPN

Specific function: Unknown

COG id: COG2015

COG function: function code Q; Alkyl sulfatase and related hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082368, Length=663, Percent_Identity=84.7662141779789, Blast_Score=1197, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6324409, Length=634, Percent_Identity=45.1104100946372, Blast_Score=587, Evalue=1e-168,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR003033 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 74184; Mature: 74184

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKMNNSRLFRLSRVFIALTATGGLLINSVSASASESTHKASQYTQQINQNYTNSLPFN
CEEEECCCHHEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
DRQDFDDAQRGFIAPLLDQGILRTPDGKVYYRGEDFKFDLNAPAPETVNPSLWRQSQLNG
CCCCCCHHHCCCCHHHHCCCCEECCCCEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCH
ISGLFKVTDKMYQVRGQDISNITFIEGDTGIIVIDPLVTPPAAKAAFDLYLQHRPQKPIV
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEE
AVIYTHSHTDHYGGVKGLVSEDDVKAGKVQIIAPAGFMDEAISENVMAGNIMSRRALYSY
EEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHH
GLLLPRNPEGTIGNGLGVTLVTGDPSIIAPTITITKTGEKRIIDGLEFDFLMAPGSEAPS
CCEEECCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCHHHHCCCCEEEEECCCCCCCC
EMHLYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNQTLDMWGNEAEVLFMP
CEEEEHHHHHHHHHCCCCHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEC
HTWPVWGNKHINDYVSKYRDTIKYIHDQTLHLANQGYTMNEIGNMLKLPPSLANNWASRG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHCCCEEHHHHHHHHCCCHHHHHHHHCCC
YYGSVSHNARAVYNFYLGYYDGNPANLNPYGQVDMGQRYVKALGGSARAINLAQEAYKQG
CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHCC
DYRWAAELLKQVIAANPGDQVAKNLQANTFEQLGYQAESATWRGFYLTGAKELREGVHKF
CHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHH
AHGTTYSPDTLKGMSVEMLFDYMAVLLNSEKAEGKSVNLNFNMDNGDNLNLTLNNSVLNY
HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCHHHH
RQTLQPNADASFYISRADLHQVLTGQAKMADLIKAKKVKVIGKAAKLDEIFTSLDQFELW
HHHCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
VNIVTPN
EEEECCC
>Mature Secondary Structure
MEIKMNNSRLFRLSRVFIALTATGGLLINSVSASASESTHKASQYTQQINQNYTNSLPFN
CEEEECCCHHEEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
DRQDFDDAQRGFIAPLLDQGILRTPDGKVYYRGEDFKFDLNAPAPETVNPSLWRQSQLNG
CCCCCCHHHCCCCHHHHCCCCEECCCCEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCH
ISGLFKVTDKMYQVRGQDISNITFIEGDTGIIVIDPLVTPPAAKAAFDLYLQHRPQKPIV
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEE
AVIYTHSHTDHYGGVKGLVSEDDVKAGKVQIIAPAGFMDEAISENVMAGNIMSRRALYSY
EEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHH
GLLLPRNPEGTIGNGLGVTLVTGDPSIIAPTITITKTGEKRIIDGLEFDFLMAPGSEAPS
CCEEECCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCHHHHCCCCEEEEECCCCCCCC
EMHLYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNQTLDMWGNEAEVLFMP
CEEEEHHHHHHHHHCCCCHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEC
HTWPVWGNKHINDYVSKYRDTIKYIHDQTLHLANQGYTMNEIGNMLKLPPSLANNWASRG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHCCCEEHHHHHHHHCCCHHHHHHHHCCC
YYGSVSHNARAVYNFYLGYYDGNPANLNPYGQVDMGQRYVKALGGSARAINLAQEAYKQG
CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHCC
DYRWAAELLKQVIAANPGDQVAKNLQANTFEQLGYQAESATWRGFYLTGAKELREGVHKF
CHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHH
AHGTTYSPDTLKGMSVEMLFDYMAVLLNSEKAEGKSVNLNFNMDNGDNLNLTLNNSVLNY
HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCHHHH
RQTLQPNADASFYISRADLHQVLTGQAKMADLIKAKKVKVIGKAAKLDEIFTSLDQFELW
HHHCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
VNIVTPN
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]