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The map label for this gene is ytcA [H]

Identifier: 218551505

GI number: 218551505

Start: 4392222

End: 4392539

Strand: Direct

Name: ytcA [H]

Synonym: EFER_4288

Alternate gene names: 218551505

Gene position: 4392222-4392539 (Clockwise)

Preceding gene: 218551504

Following gene: 218551506

Centisome position: 95.72

GC content: 43.71

Gene sequence:

>318_bases
TTGACCAGGGATATTATTCGCCGTAAACGGGATGTTTTTATGATGCAAAGAATTAAATCCATTTTAGGAACGCAGTTAAA
AAAATTGTTTCTGCTCATACCAGCAATATTATTAACCGGTTGTAAGTTATCTCCTGCAATTCCCGTCATCGGTGCTTACT
ATCCTGGCTGGCTTTTCTGCCTGATTGCAGGCGTCGTTCTTACCCTTATTACGCGGCAAATCATACTGCGCACTTATAAC
AACCTGTCATGTGCCGGGCTGGTTTACACCGCGCTGTTTGCCCTCTACTCCACGCTGTTCTGGCTGGTTTTTTTCTAA

Upstream 100 bases:

>100_bases
CAATAATGTTAATGAATAAGTTCTGAATGCGGTAAAAGATTAAAGCCATTTCGCAGGTATTAAAAAATCGCCATACTGTG
CTCCGGTTTCGCTATTCATA

Downstream 100 bases:

>100_bases
CTTATTTTTGAGATGCGCTCATGGAAAGTACGCCAAAAAACGCTACGCGCAATAAATTACCCGCGTTGATCCTGACCGTT
GCGGCAGTCGTTGCTCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTRDIIRRKRDVFMMQRIKSILGTQLKKLFLLIPAILLTGCKLSPAIPVIGAYYPGWLFCLIAGVVLTLITRQIILRTYN
NLSCAGLVYTALFALYSTLFWLVFF

Sequences:

>Translated_105_residues
MTRDIIRRKRDVFMMQRIKSILGTQLKKLFLLIPAILLTGCKLSPAIPVIGAYYPGWLFCLIAGVVLTLITRQIILRTYN
NLSCAGLVYTALFALYSTLFWLVFF
>Mature_104_residues
TRDIIRRKRDVFMMQRIKSILGTQLKKLFLLIPAILLTGCKLSPAIPVIGAYYPGWLFCLIAGVVLTLITRQIILRTYNN
LSCAGLVYTALFALYSTLFWLVFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential). Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ytcA family [H]

Homologues:

Organism=Escherichia coli, GI145693213, Length=91, Percent_Identity=58.2417582417582, Blast_Score=110, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12005; Mature: 11874

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDIIRRKRDVFMMQRIKSILGTQLKKLFLLIPAILLTGCKLSPAIPVIGAYYPGWLFC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LIAGVVLTLITRQIILRTYNNLSCAGLVYTALFALYSTLFWLVFF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TRDIIRRKRDVFMMQRIKSILGTQLKKLFLLIPAILLTGCKLSPAIPVIGAYYPGWLFC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LIAGVVLTLITRQIILRTYNNLSCAGLVYTALFALYSTLFWLVFF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11258796 [H]