| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218550932
Identifier: 218550932
GI number: 218550932
Start: 3745939
End: 3746757
Strand: Direct
Name: 218550932
Synonym: EFER_3658
Alternate gene names: NA
Gene position: 3745939-3746757 (Clockwise)
Preceding gene: 218550930
Following gene: 218550933
Centisome position: 81.63
GC content: 41.51
Gene sequence:
>819_bases GTGCTGAAAAAGGATAAATTTCATATGCGTTTTGATACCCATGCCCATGTTTTCCGCTTAGACCTACCGTTGGCAGAACA ATGCCGCTACGTTCCTGAATATGATGCAACACCTGAACATTACCTCTCACATCTTGACCAGCACGGTTTCGATAAAGCGA TTTTAATCCAGCCAAGTTTTCTGGGAACAGATAACCACTACATGCTTGAGGCTATTCGCCGGTATCCGGATCGTTTTTTC GGTGTCGCGGTGATCGATATCACAACTTCACTTTCAGCGATGGAAGAGATGAAACGAAACGGCATTGTTGGTATTCGCCT GAATTTAATTGGACAACCAATCCCCGATCTGACCTCTCCTTTATGGCGTCAATTTCTAATTCAAATTAAGAATCTGGGCT GGCATGTCGAACTTCATCGTCCGGTAGCAGATTTACGTCCTTTAATTGAAGCATTGTTACAGGCCGGGGTAAAAATCGTT ATTGACCATTTCGGATTACCCAAAGATAAAGTGCAAGACAGCGGATTTAATTTTCTTCTCAAGCAGGCCAGCTCTCGAAA TATTTGGGTCAAAATTTCCGCCAGTTATCGTAATGGTGATTATCTATTGCCTGCTGATAATGTTGGGATGCTTCTGTCGC CCTTGTTGAAGAATGTTGGCGCTGATCGCTTATTATGGGGAAGTGACTGGCCTCATACACGTTATGAAACTCGTATAACA TATGAAAAAACTGTTCATGAATTTTTTAACTGGCCACTTTCGGAAAAAGAAAGAAACATGATTTTAGAAAAAAGTGTAGT AGATCTACTAACCCTATAA
Upstream 100 bases:
>100_bases GTATAGTCAACTACAGTTAAAGTTGACTATACAACTATGTATGATTTGAACGTTTCTACGTGAAAATTGGATTACGTTTT GCTGATAGTTTATCGCTATC
Downstream 100 bases:
>100_bases TGGGAAATCATACATAATTCATATAAATAATCAGCATAATTTCTGTCACCCGACTGTGATAAAGATTATTGCGCGCATAT AACATAATAATATTGAGCAG
Product: hydrolase
Products: NA
Alternate protein names: Amidohydrolase; 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Dicarboxylic Acid Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; Metal-Dependent Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLKKDKFHMRFDTHAHVFRLDLPLAEQCRYVPEYDATPEHYLSHLDQHGFDKAILIQPSFLGTDNHYMLEAIRRYPDRFF GVAVIDITTSLSAMEEMKRNGIVGIRLNLIGQPIPDLTSPLWRQFLIQIKNLGWHVELHRPVADLRPLIEALLQAGVKIV IDHFGLPKDKVQDSGFNFLLKQASSRNIWVKISASYRNGDYLLPADNVGMLLSPLLKNVGADRLLWGSDWPHTRYETRIT YEKTVHEFFNWPLSEKERNMILEKSVVDLLTL
Sequences:
>Translated_272_residues MLKKDKFHMRFDTHAHVFRLDLPLAEQCRYVPEYDATPEHYLSHLDQHGFDKAILIQPSFLGTDNHYMLEAIRRYPDRFF GVAVIDITTSLSAMEEMKRNGIVGIRLNLIGQPIPDLTSPLWRQFLIQIKNLGWHVELHRPVADLRPLIEALLQAGVKIV IDHFGLPKDKVQDSGFNFLLKQASSRNIWVKISASYRNGDYLLPADNVGMLLSPLLKNVGADRLLWGSDWPHTRYETRIT YEKTVHEFFNWPLSEKERNMILEKSVVDLLTL >Mature_272_residues MLKKDKFHMRFDTHAHVFRLDLPLAEQCRYVPEYDATPEHYLSHLDQHGFDKAILIQPSFLGTDNHYMLEAIRRYPDRFF GVAVIDITTSLSAMEEMKRNGIVGIRLNLIGQPIPDLTSPLWRQFLIQIKNLGWHVELHRPVADLRPLIEALLQAGVKIV IDHFGLPKDKVQDSGFNFLLKQASSRNIWVKISASYRNGDYLLPADNVGMLLSPLLKNVGADRLLWGSDWPHTRYETRIT YEKTVHEFFNWPLSEKERNMILEKSVVDLLTL
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31557; Mature: 31557
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKDKFHMRFDTHAHVFRLDLPLAEQCRYVPEYDATPEHYLSHLDQHGFDKAILIQPSF CCCCCCEEEEECCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCC LGTDNHYMLEAIRRYPDRFFGVAVIDITTSLSAMEEMKRNGIVGIRLNLIGQPIPDLTSP CCCCCHHHHHHHHHCCHHHHCEEEEEHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHH LWRQFLIQIKNLGWHVELHRPVADLRPLIEALLQAGVKIVIDHFGLPKDKVQDSGFNFLL HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCHHHHH KQASSRNIWVKISASYRNGDYLLPADNVGMLLSPLLKNVGADRLLWGSDWPHTRYETRIT HHCCCCEEEEEEEEEECCCCEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEH YEKTVHEFFNWPLSEKERNMILEKSVVDLLTL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKKDKFHMRFDTHAHVFRLDLPLAEQCRYVPEYDATPEHYLSHLDQHGFDKAILIQPSF CCCCCCEEEEECCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCC LGTDNHYMLEAIRRYPDRFFGVAVIDITTSLSAMEEMKRNGIVGIRLNLIGQPIPDLTSP CCCCCHHHHHHHHHCCHHHHCEEEEEHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHH LWRQFLIQIKNLGWHVELHRPVADLRPLIEALLQAGVKIVIDHFGLPKDKVQDSGFNFLL HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCHHHHH KQASSRNIWVKISASYRNGDYLLPADNVGMLLSPLLKNVGADRLLWGSDWPHTRYETRIT HHCCCCEEEEEEEEEECCCCEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEH YEKTVHEFFNWPLSEKERNMILEKSVVDLLTL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA