| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218550933
Identifier: 218550933
GI number: 218550933
Start: 3746930
End: 3747805
Strand: Direct
Name: 218550933
Synonym: EFER_3659
Alternate gene names: NA
Gene position: 3746930-3747805 (Clockwise)
Preceding gene: 218550932
Following gene: 218550934
Centisome position: 81.66
GC content: 38.81
Gene sequence:
>876_bases ATGAATATCAGCATGATAGTTGTTTTAGCTATCATTGTAGCGATTGCATTAGGCTACAAAACAAAAATTAATACAGGATT GTTTGCAATAGCATTTGCCTATCTTATCGGTTGTTTCTTATTAGATATGAAGGCTGGTGAACTGATAAAAACCTGGCCTG TTAGTATATTTTTTGTGATTTTTGCTGTGTCACTTTTTTACAACTTTGCCTTAATCAATGGCACATTAGAAAAAATGGCC ATGTATCTATTATACCTCTGTCGCCATTTCCCTAAATTATTACCTCTAATTATCTATTTTGCCGCAAGTCTGGTGGCAGC GTTAGGTGCGGGTTTCTTCACGGTGTTAGCCTTTTTTGCACCATTAACATTGCTGTTATGCAGAAAGACAGGAATGAACA AACTAGTGGCAGCCGTCGCCGTAAACTATGGTGCACTTGGTGGCGCAAATTTTATGACCAGCGCAAGTGGTGTTGTATTT CGTAGCCTGATAGATAACGCAGGTTATAGCGCAAACTCATTTATTTACAGTTCAGCAATTTTCATTGTTTCCTTTGTACT TCCTGTGGTTGTCATCTCCTTACTTATTGCTGTTACAGGAAGGGATCAAAAAATGGCTACTGGTTCCTTACAAATCGAAA AGCCAGAGGCTTTTAACCATCAACAAAAAATAAACCTTATTCTGATTTGTACCATGTTGCTGGTAGTGCTCGTTTTCCCG GTTTTACATTTAATTGTGCCTCATTATGATGTTGTTAAATTTATAAATATCCGGGTTGATGTTGGGTTAGTCGCCATTCT CTTTACCGTTATTGCGTTATTACTCAATCTCGGTGATGAAAAAAGGCGGTGGCGCTGGTTCCCTGGGGCACACTGA
Upstream 100 bases:
>100_bases GCGCATATAACATAATAATATTGAGCAGGCTGATGCTGTAAGTCTGTATTTTCAGATTTTATTAGCTGTATTTTCCGGTT ACTAAACAAAAGGATTTATC
Downstream 100 bases:
>100_bases TTATGATTTGCGGCGTGGGTATGCTTATCCAGGTAGCGATTAAAGCGGGCACCATAGATATGTTAGCCAGCTGGGTGGGT ACAAGTTTACCTACTGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Dicarboxylate Carrier MatC Domain-Containing Protein; Integral Membrane Protein; Dicarboxylate Carrier Protein; Di- And Tricarboxylate Transporter; Dicarboxylate Carrier Protein MatC; Membrane Associated Dicarboxylate Carrier Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNISMIVVLAIIVAIALGYKTKINTGLFAIAFAYLIGCFLLDMKAGELIKTWPVSIFFVIFAVSLFYNFALINGTLEKMA MYLLYLCRHFPKLLPLIIYFAASLVAALGAGFFTVLAFFAPLTLLLCRKTGMNKLVAAVAVNYGALGGANFMTSASGVVF RSLIDNAGYSANSFIYSSAIFIVSFVLPVVVISLLIAVTGRDQKMATGSLQIEKPEAFNHQQKINLILICTMLLVVLVFP VLHLIVPHYDVVKFINIRVDVGLVAILFTVIALLLNLGDEKRRWRWFPGAH
Sequences:
>Translated_291_residues MNISMIVVLAIIVAIALGYKTKINTGLFAIAFAYLIGCFLLDMKAGELIKTWPVSIFFVIFAVSLFYNFALINGTLEKMA MYLLYLCRHFPKLLPLIIYFAASLVAALGAGFFTVLAFFAPLTLLLCRKTGMNKLVAAVAVNYGALGGANFMTSASGVVF RSLIDNAGYSANSFIYSSAIFIVSFVLPVVVISLLIAVTGRDQKMATGSLQIEKPEAFNHQQKINLILICTMLLVVLVFP VLHLIVPHYDVVKFINIRVDVGLVAILFTVIALLLNLGDEKRRWRWFPGAH >Mature_291_residues MNISMIVVLAIIVAIALGYKTKINTGLFAIAFAYLIGCFLLDMKAGELIKTWPVSIFFVIFAVSLFYNFALINGTLEKMA MYLLYLCRHFPKLLPLIIYFAASLVAALGAGFFTVLAFFAPLTLLLCRKTGMNKLVAAVAVNYGALGGANFMTSASGVVF RSLIDNAGYSANSFIYSSAIFIVSFVLPVVVISLLIAVTGRDQKMATGSLQIEKPEAFNHQQKINLILICTMLLVVLVFP VLHLIVPHYDVVKFINIRVDVGLVAILFTVIALLLNLGDEKRRWRWFPGAH
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31997; Mature: 31997
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISMIVVLAIIVAIALGYKTKINTGLFAIAFAYLIGCFLLDMKAGELIKTWPVSIFFVI CCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FAVSLFYNFALINGTLEKMAMYLLYLCRHFPKLLPLIIYFAASLVAALGAGFFTVLAFFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLTLLLCRKTGMNKLVAAVAVNYGALGGANFMTSASGVVFRSLIDNAGYSANSFIYSSAI HHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FIVSFVLPVVVISLLIAVTGRDQKMATGSLQIEKPEAFNHQQKINLILICTMLLVVLVFP HHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCHHHCHHHHHHHHHHHHHHHHHHHHH VLHLIVPHYDVVKFINIRVDVGLVAILFTVIALLLNLGDEKRRWRWFPGAH HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCC >Mature Secondary Structure MNISMIVVLAIIVAIALGYKTKINTGLFAIAFAYLIGCFLLDMKAGELIKTWPVSIFFVI CCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH FAVSLFYNFALINGTLEKMAMYLLYLCRHFPKLLPLIIYFAASLVAALGAGFFTVLAFFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLTLLLCRKTGMNKLVAAVAVNYGALGGANFMTSASGVVFRSLIDNAGYSANSFIYSSAI HHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FIVSFVLPVVVISLLIAVTGRDQKMATGSLQIEKPEAFNHQQKINLILICTMLLVVLVFP HHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEECCHHHCHHHHHHHHHHHHHHHHHHHHH VLHLIVPHYDVVKFINIRVDVGLVAILFTVIALLLNLGDEKRRWRWFPGAH HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA