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The map label for this gene is ysgA [H]

Identifier: 218550930

GI number: 218550930

Start: 3744119

End: 3744997

Strand: Direct

Name: ysgA [H]

Synonym: EFER_3656

Alternate gene names: 218550930

Gene position: 3744119-3744997 (Clockwise)

Preceding gene: 218550928

Following gene: 218550932

Centisome position: 81.59

GC content: 52.9

Gene sequence:

>879_bases
GTGATTTGTTGCATGCTGACTATAGTTAACATTGCGCAACATTTTTATAAGGGTACGGAGAATACCATGGCAACAACACA
ACAATCTGGATTTGCACCTGCTGCATCACCTCTCGCTTCGACCATCGTTCAGACCCCGGATGACGCGATTGTAGCAGGTA
TCACCTCTATCCCTTCCCAAGGGGATAACATGCCTGCTTACCATGCCAGACCAAAGCAGAGCGATGGCCTACTACCAGTG
GTCATTGTAGTGCAGGAAATTTTTGGCGTGCATGAACATATCCGCGATATTTGTCGCCGTCTGGCGCTGGAGGGGTATCT
GGCTATCGCACCTGAACTTTACTTCCGCGAAGGCGATCCGAATGATTTTGCCGATATCCCTACGCTGCTTAGCGGTCTGG
TAGCAAAGGTGCCTGACTCGCAGGTGCTGGCCGATCTCGATCATGTCGCCAGTTGGGCGTCACGCAACGGCGGTGATGTC
CATCGTTTAATGATCACCGGATTTTGCTGGGGTGGGCGCATCACCTGGCTGTATGCTGCGCATAACCCGCAACTGAAAGC
GGCGGTGGCATGGTACGGCAAGCTGACGGGCGATAAGACGCTAAATTCACCGAAACAGCCTGTTGATATCGCAACCGATC
TTAACGCGCCAGTTCTCGGCTTATATGGCGGCCAGGATAACAGCATTCCGCAAGAGAGCGTGGAAACCATGCGTCAGGCG
CTGCGGGCAGCAAACGCGAAAGCAGAGATTATCGTCTACCCGGATGCCGGGCATGCATTCAACGCCGATTATCGCCCCAG
TTATCATGCTGAGTCGGCGAAAGATGGCTGGCAGCGAATGCTGGAGTGGTTTAAGCAGTATGGCAGATCAGTTAGATAA

Upstream 100 bases:

>100_bases
TAAATGCGTTGCATAAATTTACCCACCAAAAGTGATGTGAATCACATAAATCACTCTTCATTCTGCATGACTGCATAAAA
GATGAGCCGATTCAGGCAAT

Downstream 100 bases:

>100_bases
CAAGTACAGAATTGCCCTATACGAAACTTATTACGCCGCATCCGGTGAGAAGTTTTGCACGCCTGCCTGCCGTTAATTAC
GGCAGGTTATTCCTGCTTAC

Product: hydrolase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MICCMLTIVNIAQHFYKGTENTMATTQQSGFAPAASPLASTIVQTPDDAIVAGITSIPSQGDNMPAYHARPKQSDGLLPV
VIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDV
HRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKTLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGRSVR

Sequences:

>Translated_292_residues
MICCMLTIVNIAQHFYKGTENTMATTQQSGFAPAASPLASTIVQTPDDAIVAGITSIPSQGDNMPAYHARPKQSDGLLPV
VIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDV
HRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKTLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGRSVR
>Mature_292_residues
MICCMLTIVNIAQHFYKGTENTMATTQQSGFAPAASPLASTIVQTPDDAIVAGITSIPSQGDNMPAYHARPKQSDGLLPV
VIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDV
HRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKTLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGRSVR

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI48994982, Length=266, Percent_Identity=97.7443609022556, Blast_Score=541, Evalue=1e-155,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 31963; Mature: 31963

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICCMLTIVNIAQHFYKGTENTMATTQQSGFAPAASPLASTIVQTPDDAIVAGITSIPSQ
CHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCC
GDNMPAYHARPKQSDGLLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCEEECCCC
NDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEEEEE
HNPQLKAAVAWYGKLTGDKTLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
CCCCCEEHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH
LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGRSVR
HHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MICCMLTIVNIAQHFYKGTENTMATTQQSGFAPAASPLASTIVQTPDDAIVAGITSIPSQ
CHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCC
GDNMPAYHARPKQSDGLLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCEEECCCC
NDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEEEEE
HNPQLKAAVAWYGKLTGDKTLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
CCCCCEEHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH
LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGRSVR
HHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]