Click here to switch to the map view.

The map label for this gene is yiiZ [H]

Identifier: 218550203

GI number: 218550203

Start: 2960153

End: 2961139

Strand: Direct

Name: yiiZ [H]

Synonym: EFER_2895

Alternate gene names: 218550203

Gene position: 2960153-2961139 (Clockwise)

Preceding gene: 218550202

Following gene: 218550204

Centisome position: 64.51

GC content: 43.47

Gene sequence:

>987_bases
ATGAAGATGAGGTCATTTACCCGCTCATTAGTCTGCGCATCCTTGCTGGCTCTGCTTAGCACTGGCGTAAACGCCGCAGA
AAAAGTGACGTTAAAGTTAGCACACAACCTGGAAAGAAGTCATGTTGTGCATCAGAGTTTTGAAGAGCTGGCGAAAGAGG
TAAAACAGCTGTCAAAAGGTAATATGGTGATCCGCATTTATCCCAGTAGCCAAATGGGTAACGCGCGAGAAACCATGGAG
TTGTTGCAAAATGGCGCACTGGATATGACCAAGGGTTCAGCCAGTGATCTGGAGTCTTTTGATAATATTTATGCTATCTA
TAATTTGCCGTTCTTATTTAAAGATCAGGCGCACTTCAACAAAGTTGTTTTTGGTGAAGTTGGTAAAGAAATTATGGATT
CAACAAAAGATAAAGGCTTTTTTGCTTTATCAGCTTATGTAGCGGGTACTCGCAGTTTCTATGCGAAAAAACCGATTACT
AAGCCAGAAGATCTTAAAGGGCTGAAAATTCGTGTTCAGCCAAGCCCGACCACCATCAAAATGATTGAACTGATGGGTGG
CTCCCCCACTCCAATTTCATTTGGCGAAGTTTATACTGCGATGCAGCAAGGTGTAGTAGATGGCGCAGAAAATAACGTGC
CTTCCTGGGTGCAGACTCGGCATATCGAAATTGCCAAAGTCTTTTCTGAAGATGAACACGCCTCAATTCCGGACTTTTTG
GTTATCTCCACCAAAACATGGAATAAATTAACCCCGGAACAGCAGCAAATTATCGAAACAGCGGCGAAGAAATCCGAAGT
TTATCAACAAAAGTTGTGGGAAAAAATCGACGCTGACACTCGTGCTCAGGCGAAAGCCATGGGTGGTGAAATCGTTAAGG
TTGATAAAGCCCCATTCCGTGCCGCAGTTCAGCCTCTGTTTGACGACTTCAAAAAAGATCCAAAACAAGCTGCTTTGTTA
GAGAAATTCGACAACGCTGCTCAATAA

Upstream 100 bases:

>100_bases
TAGACAAGTTGTCAGACAGGTTAACCAATTTGTCGCACAAAGCACTGATAAGCACAATTAGATATCAACCAATTTCCATC
CTTCAACAGGGAGTTTTTAT

Downstream 100 bases:

>100_bases
TATTCCGGGCCAGTCTCTGGCCCTGATTTTCCAGGATGCTTACAATGATATTTAACCGCCTGAAACTTGCGGTAGACCGC
GTCATTGCCGCGTTTTCTGT

Product: c4-dicarboxylate transport system binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKMRSFTRSLVCASLLALLSTGVNAAEKVTLKLAHNLERSHVVHQSFEELAKEVKQLSKGNMVIRIYPSSQMGNARETME
LLQNGALDMTKGSASDLESFDNIYAIYNLPFLFKDQAHFNKVVFGEVGKEIMDSTKDKGFFALSAYVAGTRSFYAKKPIT
KPEDLKGLKIRVQPSPTTIKMIELMGGSPTPISFGEVYTAMQQGVVDGAENNVPSWVQTRHIEIAKVFSEDEHASIPDFL
VISTKTWNKLTPEQQQIIETAAKKSEVYQQKLWEKIDADTRAQAKAMGGEIVKVDKAPFRAAVQPLFDDFKKDPKQAALL
EKFDNAAQ

Sequences:

>Translated_328_residues
MKMRSFTRSLVCASLLALLSTGVNAAEKVTLKLAHNLERSHVVHQSFEELAKEVKQLSKGNMVIRIYPSSQMGNARETME
LLQNGALDMTKGSASDLESFDNIYAIYNLPFLFKDQAHFNKVVFGEVGKEIMDSTKDKGFFALSAYVAGTRSFYAKKPIT
KPEDLKGLKIRVQPSPTTIKMIELMGGSPTPISFGEVYTAMQQGVVDGAENNVPSWVQTRHIEIAKVFSEDEHASIPDFL
VISTKTWNKLTPEQQQIIETAAKKSEVYQQKLWEKIDADTRAQAKAMGGEIVKVDKAPFRAAVQPLFDDFKKDPKQAALL
EKFDNAAQ
>Mature_328_residues
MKMRSFTRSLVCASLLALLSTGVNAAEKVTLKLAHNLERSHVVHQSFEELAKEVKQLSKGNMVIRIYPSSQMGNARETME
LLQNGALDMTKGSASDLESFDNIYAIYNLPFLFKDQAHFNKVVFGEVGKEIMDSTKDKGFFALSAYVAGTRSFYAKKPIT
KPEDLKGLKIRVQPSPTTIKMIELMGGSPTPISFGEVYTAMQQGVVDGAENNVPSWVQTRHIEIAKVFSEDEHASIPDFL
VISTKTWNKLTPEQQQIIETAAKKSEVYQQKLWEKIDADTRAQAKAMGGEIVKVDKAPFRAAVQPLFDDFKKDPKQAALL
EKFDNAAQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=331, Percent_Identity=30.5135951661631, Blast_Score=155, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36541; Mature: 36541

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRSFTRSLVCASLLALLSTGVNAAEKVTLKLAHNLERSHVVHQSFEELAKEVKQLSKG
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
NMVIRIYPSSQMGNARETMELLQNGALDMTKGSASDLESFDNIYAIYNLPFLFKDQAHFN
CEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCEEEEEECCEEEECHHHHH
KVVFGEVGKEIMDSTKDKGFFALSAYVAGTRSFYAKKPITKPEDLKGLKIRVQPSPTTIK
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEE
MIELMGGSPTPISFGEVYTAMQQGVVDGAENNVPSWVQTRHIEIAKVFSEDEHASIPDFL
EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEE
VISTKTWNKLTPEQQQIIETAAKKSEVYQQKLWEKIDADTRAQAKAMGGEIVKVDKAPFR
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCHHH
AAVQPLFDDFKKDPKQAALLEKFDNAAQ
HHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKMRSFTRSLVCASLLALLSTGVNAAEKVTLKLAHNLERSHVVHQSFEELAKEVKQLSKG
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
NMVIRIYPSSQMGNARETMELLQNGALDMTKGSASDLESFDNIYAIYNLPFLFKDQAHFN
CEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCEEEEEECCEEEECHHHHH
KVVFGEVGKEIMDSTKDKGFFALSAYVAGTRSFYAKKPITKPEDLKGLKIRVQPSPTTIK
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEE
MIELMGGSPTPISFGEVYTAMQQGVVDGAENNVPSWVQTRHIEIAKVFSEDEHASIPDFL
EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEE
VISTKTWNKLTPEQQQIIETAAKKSEVYQQKLWEKIDADTRAQAKAMGGEIVKVDKAPFR
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCHHH
AAVQPLFDDFKKDPKQAALLEKFDNAAQ
HHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]