Click here to switch to the map view.

The map label for this gene is 218550204

Identifier: 218550204

GI number: 218550204

Start: 2961175

End: 2961687

Strand: Direct

Name: 218550204

Synonym: EFER_2896

Alternate gene names: NA

Gene position: 2961175-2961687 (Clockwise)

Preceding gene: 218550203

Following gene: 218550205

Centisome position: 64.53

GC content: 43.27

Gene sequence:

>513_bases
ATGCTTACAATGATATTTAACCGCCTGAAACTTGCGGTAGACCGCGTCATTGCCGCGTTTTCTGTCGCCGTCATGCTTGC
TCTTGTTGTATGCGTAGTCTGGCAAGTATTTAGCCGCTACGTACTTAACCAGCCAAGTACATTAACCGATGAGCTGGCAC
GCTTTTTGATGATCTGGGTAGGATTATTAGGTGCTGCATATACCGTCGGCGCGCAGAGACATCTCTCTATTGATTTATTT
GCTCTCGCCCTGAATAAGCGCAAACAATTACTTCTTAATATAGTCATTAACTTTCTCATTTTAGGCTTTGCCGGTTCGGT
CATTGTGACTGGTGGCCTGAAATTAATTGATAAAACGCTGGCAACATCGCAAGTATCTGCCGCGATGCAAATACCGATGG
GATACGTATATATCATTCTGCCATTAAGTGGAGCGGTGATGATGTTTTATGCCTTGTGTTTTATTAATCAAAGTATTCAA
CAACTGAAACAACATGCGCAGGAGGCCAGTTAA

Upstream 100 bases:

>100_bases
ACGACTTCAAAAAAGATCCAAAACAAGCTGCTTTGTTAGAGAAATTCGACAACGCTGCTCAATAATATTCCGGGCCAGTC
TCTGGCCCTGATTTTCCAGG

Downstream 100 bases:

>100_bases
TGGATAGTTATATCGCGCTTACACTGTTTGGCTGTTTTTTTGTACTGGTCTTCATTGGTGTGCCCATTTCGTTCTCAATC
GGTATTGCGACTGTAACTTC

Product: TRAP-type C4-dicarboxylate transport system, small permease

Products: NA

Alternate protein names: Tripartite ATP-Independent Periplasmic Transporter DctQ; TRAP Transporter DctQ-Like Membrane Protein; Aspartate Kinase Monofunctional Class; 30S Ribosomal; Membrane Transporter; TRAP-Type C4-Dicarboxylate Transport System; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transport System Permease; C4-Dicarboxylate Transporter Small Permease Component; ATP-Independent Transporter Subunit; Inner Membrane Protein; C4-Dicarboxylate Transport System; TRAP Transporter Small Transmembrane Protein; TRAP Dicarboxylate Transporter DctQ Subunit; C4-Dicarboxylate Permease Small Protein; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLTMIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLF
ALALNKRKQLLLNIVINFLILGFAGSVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGAVMMFYALCFINQSIQ
QLKQHAQEAS

Sequences:

>Translated_170_residues
MLTMIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLF
ALALNKRKQLLLNIVINFLILGFAGSVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGAVMMFYALCFINQSIQ
QLKQHAQEAS
>Mature_170_residues
MLTMIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLF
ALALNKRKQLLLNIVINFLILGFAGSVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGAVMMFYALCFINQSIQ
QLKQHAQEAS

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18738; Mature: 18738

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTMIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GLLGAAYTVGAQRHLSIDLFALALNKRKQLLLNIVINFLILGFAGSVIVTGGLKLIDKTL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
ATSQVSAAMQIPMGYVYIILPLSGAVMMFYALCFINQSIQQLKQHAQEAS
HHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTMIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GLLGAAYTVGAQRHLSIDLFALALNKRKQLLLNIVINFLILGFAGSVIVTGGLKLIDKTL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
ATSQVSAAMQIPMGYVYIILPLSGAVMMFYALCFINQSIQQLKQHAQEAS
HHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA