| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549726
Identifier: 218549726
GI number: 218549726
Start: 2463672
End: 2464460
Strand: Reverse
Name: 218549726
Synonym: EFER_2403
Alternate gene names: NA
Gene position: 2464460-2463672 (Counterclockwise)
Preceding gene: 218549727
Following gene: 218549725
Centisome position: 53.71
GC content: 52.72
Gene sequence:
>789_bases ATGCTGCGTCATAAGGCGCAGCAAAATCACAACAACACACGTTACAAACAGGATGAGTTTATGGGAGAGGCTATATCTCT ATGGCCACTGACGGGTATTGCCGTCATTGTGGTCGGATTTCTTTTACGTTTTAACCCGGTGCTGGTGGTGATTGTCGCCG GGATCGTGACTGGGCTGGCAGCGCAGATGCCGATCGCCACGATCCTCGAAAAGCTGGGTGAAGGGTTTCTTAATACTCGC AATCTGCCGTTTATTCTGCTGCTGCCACTGGCAGTTATCGGTCTGCTGGAGCGTCACGGGCTTAAAGAGCGCGCTCAGGC GTGGATTGCCAAAATTCGTAGCGCCACATCAGGACGCCTGCTGATTGTTTATCTTTTCATTCGCGAATGCACTGCGGCAC TGGGATTAACCAGTCTTGGCGGGCAGCCGCAAATGGTGCGTCCGTTGCTGGCCCCGATGGCAGAAGGCGCCGCGGAGAAA AAGTATGGACCGTTGCCCGGAGCAGTGCGTTATCGTCTGCGGGCGATGTCGGCAGCGACTGATAACGTCGGGCTGTTTTT TGGCGAAGATATTTTCGTTGCCTTTGGTGCGATCATCTTCATGCATAACTTTATGCTGGAGTCTGGCGGTATTCAGACTG AACCATTGCATATTGCCCTGTGGGGGATCCCTACAGCGATTTGCGCTTTTCTGATCCACGGCGCGCGGTTGTGGCGTTTG GATCATTATCTGCATCGTGAATTAAGTAAAGCCAATGGCACCACGGTAGAGAAAGGAGAAGTGCAATGA
Upstream 100 bases:
>100_bases TTTGTTTACATGGTGACGGGGAGCACGCTCTCGCTTTTGCCCGTCGCCTTCGCGCTGCGTTCCTGGAGCGTGGAATCGCA GTACAAGCATAAATAAAAAA
Downstream 100 bases:
>100_bases ATTTTCAGCAAAGCTGGCTTTACTGGCTGGCAGGGATCGTCCTGCTGATAGTGGCGGTGATGTCCTGGCAGGATAAAGCG AACCCGCGCCGTGTGACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MLRHKAQQNHNNTRYKQDEFMGEAISLWPLTGIAVIVVGFLLRFNPVLVVIVAGIVTGLAAQMPIATILEKLGEGFLNTR NLPFILLLPLAVIGLLERHGLKERAQAWIAKIRSATSGRLLIVYLFIRECTAALGLTSLGGQPQMVRPLLAPMAEGAAEK KYGPLPGAVRYRLRAMSAATDNVGLFFGEDIFVAFGAIIFMHNFMLESGGIQTEPLHIALWGIPTAICAFLIHGARLWRL DHYLHRELSKANGTTVEKGEVQ
Sequences:
>Translated_262_residues MLRHKAQQNHNNTRYKQDEFMGEAISLWPLTGIAVIVVGFLLRFNPVLVVIVAGIVTGLAAQMPIATILEKLGEGFLNTR NLPFILLLPLAVIGLLERHGLKERAQAWIAKIRSATSGRLLIVYLFIRECTAALGLTSLGGQPQMVRPLLAPMAEGAAEK KYGPLPGAVRYRLRAMSAATDNVGLFFGEDIFVAFGAIIFMHNFMLESGGIQTEPLHIALWGIPTAICAFLIHGARLWRL DHYLHRELSKANGTTVEKGEVQ >Mature_262_residues MLRHKAQQNHNNTRYKQDEFMGEAISLWPLTGIAVIVVGFLLRFNPVLVVIVAGIVTGLAAQMPIATILEKLGEGFLNTR NLPFILLLPLAVIGLLERHGLKERAQAWIAKIRSATSGRLLIVYLFIRECTAALGLTSLGGQPQMVRPLLAPMAEGAAEK KYGPLPGAVRYRLRAMSAATDNVGLFFGEDIFVAFGAIIFMHNFMLESGGIQTEPLHIALWGIPTAICAFLIHGARLWRL DHYLHRELSKANGTTVEKGEVQ
Specific function: Unknown
COG id: COG3819
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28802; Mature: 28802
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRHKAQQNHNNTRYKQDEFMGEAISLWPLTGIAVIVVGFLLRFNPVLVVIVAGIVTGLA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQMPIATILEKLGEGFLNTRNLPFILLLPLAVIGLLERHGLKERAQAWIAKIRSATSGRL HHCCHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH LIVYLFIRECTAALGLTSLGGQPQMVRPLLAPMAEGAAEKKYGPLPGAVRYRLRAMSAAT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHCC DNVGLFFGEDIFVAFGAIIFMHNFMLESGGIQTEPLHIALWGIPTAICAFLIHGARLWRL CCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH DHYLHRELSKANGTTVEKGEVQ HHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLRHKAQQNHNNTRYKQDEFMGEAISLWPLTGIAVIVVGFLLRFNPVLVVIVAGIVTGLA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQMPIATILEKLGEGFLNTRNLPFILLLPLAVIGLLERHGLKERAQAWIAKIRSATSGRL HHCCHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH LIVYLFIRECTAALGLTSLGGQPQMVRPLLAPMAEGAAEKKYGPLPGAVRYRLRAMSAAT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHCC DNVGLFFGEDIFVAFGAIIFMHNFMLESGGIQTEPLHIALWGIPTAICAFLIHGARLWRL CCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH DHYLHRELSKANGTTVEKGEVQ HHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA