| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549725
Identifier: 218549725
GI number: 218549725
Start: 2462680
End: 2463675
Strand: Reverse
Name: 218549725
Synonym: EFER_2402
Alternate gene names: NA
Gene position: 2463675-2462680 (Counterclockwise)
Preceding gene: 218549726
Following gene: 218549724
Centisome position: 53.69
GC content: 52.21
Gene sequence:
>996_bases ATGAATTTTCAGCAAAGCTGGCTTTACTGGCTGGCAGGGATCGTCCTGCTGATAGTGGCGGTGATGTCCTGGCAGGATAA AGCGAACCCGCGCCGTGTGACCACCGGGCTGTTCTGGGGCATTTACGGCCTGTTGTTTTTGCTTGGCGACTGGACGTACT CATTGGTTGGCGATAAACGCACGGTCAATATTGCGGTCGGGGTGGCAGTTGTACTCATGGCGCTAATTGCTGGTTTTGGT GGCGTTAAGTTGGGGCGTTATCACCAGCGTACTCCACAGCAGCGCGAAGAGAGTGCCCAACGGTTGGGCAATCGGCTTTT TTATCCGGCACTGGCGATTCCGTTGGTCACGGTGATTGGCGTCCTGATGTTCAATCACATTCCCGGTTTGCAGGAAGCGC TATTTGGTCCTGGTAATCATTCGACACTGGTGACCCTGTTTTCCATGACGGTGGGTACGCTGATTGGCCTGGCGATGGGG ATCAAAATGACCCATGAGCGGGTACATCAGCCAATTCAGGAAGCGCGTCGGCTTCTGGACTCCATTGGCTGGGCGTTTAT CTTGCCGCAAATTCTCGCCACGTTGGGCTTGCTGTTTACGGCTGCGGGTGTTGGCAATGGTATTTCGTATCTCACTCAGG AATATCTGGCGGTAGATAGTCGATTTATTGCAGTAGCGGTTTATACCATTGGTATGGCATTGCTGACGATGGTGATGGGT AATGCTTTTGCCGCCTTCCCGATAGTGACTGCTGGGATCGGCATTCCTATTCTGGTGCTTCAACATGGTGGTAACCCGGC GGTAATGGCCGCTATCGGGATGTTCTCTGGTTATTGTGGTACGTTGATGACGCCGATGGCGGCGAATTTCAATATCGTAC CTGCTGCTTTGCTGGAGCTGCCGGATAAAAACGCGGTGATCAAAGTCCAGGTGCCGACCGGCCTGATGCTATTGCTGGTC AATATTTTCCTGATGTATTTCCTGATGTTTTTATAA
Upstream 100 bases:
>100_bases CTTTTCTGATCCACGGCGCGCGGTTGTGGCGTTTGGATCATTATCTGCATCGTGAATTAAGTAAAGCCAATGGCACCACG GTAGAGAAAGGAGAAGTGCA
Downstream 100 bases:
>100_bases GGGGGCAGGATGAAAACCGTTTTAATCACCGGTTTTGAACCGTTTGGTGGTGAGCAAATTAATCCTTCATGGGAAGTAGT TTCGCAGCTCGATAATGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MNFQQSWLYWLAGIVLLIVAVMSWQDKANPRRVTTGLFWGIYGLLFLLGDWTYSLVGDKRTVNIAVGVAVVLMALIAGFG GVKLGRYHQRTPQQREESAQRLGNRLFYPALAIPLVTVIGVLMFNHIPGLQEALFGPGNHSTLVTLFSMTVGTLIGLAMG IKMTHERVHQPIQEARRLLDSIGWAFILPQILATLGLLFTAAGVGNGISYLTQEYLAVDSRFIAVAVYTIGMALLTMVMG NAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGTLMTPMAANFNIVPAALLELPDKNAVIKVQVPTGLMLLLV NIFLMYFLMFL
Sequences:
>Translated_331_residues MNFQQSWLYWLAGIVLLIVAVMSWQDKANPRRVTTGLFWGIYGLLFLLGDWTYSLVGDKRTVNIAVGVAVVLMALIAGFG GVKLGRYHQRTPQQREESAQRLGNRLFYPALAIPLVTVIGVLMFNHIPGLQEALFGPGNHSTLVTLFSMTVGTLIGLAMG IKMTHERVHQPIQEARRLLDSIGWAFILPQILATLGLLFTAAGVGNGISYLTQEYLAVDSRFIAVAVYTIGMALLTMVMG NAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGTLMTPMAANFNIVPAALLELPDKNAVIKVQVPTGLMLLLV NIFLMYFLMFL >Mature_331_residues MNFQQSWLYWLAGIVLLIVAVMSWQDKANPRRVTTGLFWGIYGLLFLLGDWTYSLVGDKRTVNIAVGVAVVLMALIAGFG GVKLGRYHQRTPQQREESAQRLGNRLFYPALAIPLVTVIGVLMFNHIPGLQEALFGPGNHSTLVTLFSMTVGTLIGLAMG IKMTHERVHQPIQEARRLLDSIGWAFILPQILATLGLLFTAAGVGNGISYLTQEYLAVDSRFIAVAVYTIGMALLTMVMG NAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGTLMTPMAANFNIVPAALLELPDKNAVIKVQVPTGLMLLLV NIFLMYFLMFL
Specific function: Unknown
COG id: COG3817
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35958; Mature: 35958
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFQQSWLYWLAGIVLLIVAVMSWQDKANPRRVTTGLFWGIYGLLFLLGDWTYSLVGDKR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEECCCCE TVNIAVGVAVVLMALIAGFGGVKLGRYHQRTPQQREESAQRLGNRLFYPALAIPLVTVIG EEHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLMFNHIPGLQEALFGPGNHSTLVTLFSMTVGTLIGLAMGIKMTHERVHQPIQEARRLLD HHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIGWAFILPQILATLGLLFTAAGVGNGISYLTQEYLAVDSRFIAVAVYTIGMALLTMVMG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGTLMTPMAANFNIVPAALLEL CHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC PDKNAVIKVQVPTGLMLLLVNIFLMYFLMFL CCCCCEEEEECCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNFQQSWLYWLAGIVLLIVAVMSWQDKANPRRVTTGLFWGIYGLLFLLGDWTYSLVGDKR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEECCCCE TVNIAVGVAVVLMALIAGFGGVKLGRYHQRTPQQREESAQRLGNRLFYPALAIPLVTVIG EEHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLMFNHIPGLQEALFGPGNHSTLVTLFSMTVGTLIGLAMGIKMTHERVHQPIQEARRLLD HHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIGWAFILPQILATLGLLFTAAGVGNGISYLTQEYLAVDSRFIAVAVYTIGMALLTMVMG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGTLMTPMAANFNIVPAALLEL CHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC PDKNAVIKVQVPTGLMLLLVNIFLMYFLMFL CCCCCEEEEECCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA