Click here to switch to the map view.

The map label for this gene is ybgO [H]

Identifier: 218549722

GI number: 218549722

Start: 2459712

End: 2460773

Strand: Direct

Name: ybgO [H]

Synonym: EFER_2399

Alternate gene names: 218549722

Gene position: 2459712-2460773 (Clockwise)

Preceding gene: 218549721

Following gene: 218549723

Centisome position: 53.6

GC content: 42.18

Gene sequence:

>1062_bases
ATGAGTCTCTGCAAAAGCGTATTGCTTATCTTTAGCCTGCTTTTTATACCCCTTAAAGCTGCGCTGGCACTGGACTGTTA
TTTTGGTAATGCTGGCGGCCCGGTTGAAAAATCAGAGGGAATACTTCCTTTCGCTGTACCTTCAAATGCCAGACCAGGAG
ATAAAATCTGGGAGTCTGACGATATCAAAATTCCTGTTTATTGCGACAACAATACCAATGGTAACTTTGAAAGCGAACAT
GTTTACGCCTGGGTAAACCCCTATCCAGGAGTGCAGGATCGTTACTACCAATTAGGTGTCACTTATAACGGTGTTGATTA
CGATGCCAGTCAGGGAAAAAGCAGTATCGACACGACACAATGTATCGATAGCAAAAATATTGACATCTACACACCAGAAC
AAATTATTGCCATGGGATGGCAGAGTAAACTCTGTTCCGGTGATCCTGAAAATATACACAAAAAACGAACTTTTATTGCC
CGAATGCGTTTGTATGTCAAAATCCGCGAAATGCCTCCTCATGACTATCAAAGCCCGCTCAGCGATTATATTGTGGTGCA
ATTTGACGGCAAAGGTGGCATTAACGAAGATCCCGGCGCAAAAAACCTGAAATATCATATTCAAGGTCTGGAAAATATCC
GCGTTCTGGATTGCAGTGTCAATTTTTCGATTGAACCGGCTAATCAGATGATTGATTTTGGTCGCTTTAATGTGCTTGAT
ATTCGCCGCCATAATATGACTAAAACATTTAGTATCCAGACGACGAAATCACAAAATAGCCAGTGTACAGATGGCTTTAA
AGTGAGTTCCTCATTTTACACCGAAGAAACTCTGGTGGAGGAAGACAAAGCCCTGTTGATCGGCAATGGTTTACGACTGC
GATTACTGGATGAAAACGCCTCGCCCTATGCCTTTAACAAATATACGGAATATGCCGACTTCACCAGCGATATGCTCATT
TATAAGCAAACTTATACAGCAGAATTGTCCTCTATTACAGGAACACCTATTCAACCCGGCCCCTTTGACACCGTGGTGCT
GTTTAAAATTAACTACAACTGA

Upstream 100 bases:

>100_bases
ATCAGTTTTACCTCGGTTATATGGACGATTACGGTGCATTGCGCATGAATACCCTAAAATGCCAGGGCGAGTGCCGTTTA
CAGCCTGTCGAGGAGAATAA

Downstream 100 bases:

>100_bases
TCGCCTGTACTGCCCTTTTCCACCCAGAGGGGCAGACTTCTCAACTATTTTGCTATTTTTCAAATTTTCTTGATTGCTGA
TATTTTTTCTTAATCTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSLCKSVLLIFSLLFIPLKAALALDCYFGNAGGPVEKSEGILPFAVPSNARPGDKIWESDDIKIPVYCDNNTNGNFESEH
VYAWVNPYPGVQDRYYQLGVTYNGVDYDASQGKSSIDTTQCIDSKNIDIYTPEQIIAMGWQSKLCSGDPENIHKKRTFIA
RMRLYVKIREMPPHDYQSPLSDYIVVQFDGKGGINEDPGAKNLKYHIQGLENIRVLDCSVNFSIEPANQMIDFGRFNVLD
IRRHNMTKTFSIQTTKSQNSQCTDGFKVSSSFYTEETLVEEDKALLIGNGLRLRLLDENASPYAFNKYTEYADFTSDMLI
YKQTYTAELSSITGTPIQPGPFDTVVLFKINYN

Sequences:

>Translated_353_residues
MSLCKSVLLIFSLLFIPLKAALALDCYFGNAGGPVEKSEGILPFAVPSNARPGDKIWESDDIKIPVYCDNNTNGNFESEH
VYAWVNPYPGVQDRYYQLGVTYNGVDYDASQGKSSIDTTQCIDSKNIDIYTPEQIIAMGWQSKLCSGDPENIHKKRTFIA
RMRLYVKIREMPPHDYQSPLSDYIVVQFDGKGGINEDPGAKNLKYHIQGLENIRVLDCSVNFSIEPANQMIDFGRFNVLD
IRRHNMTKTFSIQTTKSQNSQCTDGFKVSSSFYTEETLVEEDKALLIGNGLRLRLLDENASPYAFNKYTEYADFTSDMLI
YKQTYTAELSSITGTPIQPGPFDTVVLFKINYN
>Mature_352_residues
SLCKSVLLIFSLLFIPLKAALALDCYFGNAGGPVEKSEGILPFAVPSNARPGDKIWESDDIKIPVYCDNNTNGNFESEHV
YAWVNPYPGVQDRYYQLGVTYNGVDYDASQGKSSIDTTQCIDSKNIDIYTPEQIIAMGWQSKLCSGDPENIHKKRTFIAR
MRLYVKIREMPPHDYQSPLSDYIVVQFDGKGGINEDPGAKNLKYHIQGLENIRVLDCSVNFSIEPANQMIDFGRFNVLDI
RRHNMTKTFSIQTTKSQNSQCTDGFKVSSSFYTEETLVEEDKALLIGNGLRLRLLDENASPYAFNKYTEYADFTSDMLIY
KQTYTAELSSITGTPIQPGPFDTVVLFKINYN

Specific function: May be involved in a fimbrial system chaperoned by ybgP and exported by ybgQ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqiI [H]

Homologues:

Organism=Escherichia coli, GI87081777, Length=353, Percent_Identity=84.985835694051, Blast_Score=626, Evalue=0.0,
Organism=Escherichia coli, GI1789427, Length=360, Percent_Identity=33.8888888888889, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39828; Mature: 39697

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLCKSVLLIFSLLFIPLKAALALDCYFGNAGGPVEKSEGILPFAVPSNARPGDKIWESD
CHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
DIKIPVYCDNNTNGNFESEHVYAWVNPYPGVQDRYYQLGVTYNGVDYDASQGKSSIDTTQ
CCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHH
CIDSKNIDIYTPEQIIAMGWQSKLCSGDPENIHKKRTFIARMRLYVKIREMPPHDYQSPL
HCCCCCCEEECCHHHEEECCCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCHHCCCC
SDYIVVQFDGKGGINEDPGAKNLKYHIQGLENIRVLDCSVNFSIEPANQMIDFGRFNVLD
CCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCHHHHHHCCCCEEEE
IRRHNMTKTFSIQTTKSQNSQCTDGFKVSSSFYTEETLVEEDKALLIGNGLRLRLLDENA
EECCCCEEEEEEEECCCCCCCCCCCEEECCCCCCHHHHHCCCCEEEEECCEEEEEECCCC
SPYAFNKYTEYADFTSDMLIYKQTYTAELSSITGTPIQPGPFDTVVLFKINYN
CCEEECCHHHHHCCCCCEEEEEEEHHEEHHHCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SLCKSVLLIFSLLFIPLKAALALDCYFGNAGGPVEKSEGILPFAVPSNARPGDKIWESD
HHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
DIKIPVYCDNNTNGNFESEHVYAWVNPYPGVQDRYYQLGVTYNGVDYDASQGKSSIDTTQ
CCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHH
CIDSKNIDIYTPEQIIAMGWQSKLCSGDPENIHKKRTFIARMRLYVKIREMPPHDYQSPL
HCCCCCCEEECCHHHEEECCCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCHHCCCC
SDYIVVQFDGKGGINEDPGAKNLKYHIQGLENIRVLDCSVNFSIEPANQMIDFGRFNVLD
CCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCHHHHHHCCCCEEEE
IRRHNMTKTFSIQTTKSQNSQCTDGFKVSSSFYTEETLVEEDKALLIGNGLRLRLLDENA
EECCCCEEEEEEEECCCCCCCCCCCEEECCCCCCHHHHHCCCCEEEEECCEEEEEECCCC
SPYAFNKYTEYADFTSDMLIYKQTYTAELSSITGTPIQPGPFDTVVLFKINYN
CCEEECCHHHHHCCCCCEEEEEEEHHEEHHHCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]