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The map label for this gene is abrB [H]

Identifier: 218549723

GI number: 218549723

Start: 2460847

End: 2461968

Strand: Direct

Name: abrB [H]

Synonym: EFER_2400

Alternate gene names: 218549723

Gene position: 2460847-2461968 (Clockwise)

Preceding gene: 218549722

Following gene: 218549731

Centisome position: 53.63

GC content: 50.71

Gene sequence:

>1122_bases
TTGCTGATATTTTTTCTTAATCTGGCTTTCTTTATGCTGTATCGATATATCAGGGGCAGTTGCGGAGAGCATGGGATGCC
AGTTTTGCAGTGGAGTTTATTATTTTTATTATCAATTCTTCTTTCCGTGCTATTTCTGGCTTTGCATCTTCCTGCGGCAT
TATTGCTCGGCCCAATGGTGGCCGGAATTATCATCAGTATGAAAGGTGCTACCTTACAACTCCCCCGCTCCGCCTTCCTT
GCCGCACAAGCCATTCTTGGTTGCATGATTGCGCAGAATCTTACCGGGTCCATACTGACCACCCTTGCGCAAAACTGGCC
CGTCGTGTTGGGTATATTACTGATTACGCTGTTTTCCAGCGCCGCAGTTGGCTGGCTATTGGTGCGCTACAGCTCACTTC
CTGGTAATACAGGTGCATGGGGATCTTCTCCCGGCGGAGCGGCAGCAATGGTCGCGATGGCCCAGGATTATGGTGCCGAT
ATCCGCCTGGTGGCATTTATGCAGTATCTACGGGTGCTGTTTGTTGCCGGGGCAGCGGTGCTGGTAACGCGGATTATAAT
GGGCGACAGCGCCGAAACGACCAGCCAACAAATGGTATGGTTCCCTCCGGTTAGCCTGAATTTACTCAGTACGCTGATTC
TGGCGAGCGTGACAGGTTTTATTGGCATTAAATTGCGCATCCCTTCCGGCACCATGTTGCTACCGATGCTTACAGGCGCA
TTCCTCCAGTCTGGTGAAATCATCACTATTGAAATGCCGGAATGGCTGCTGGCGCTTGCTTATATGGGTATTGGCTGGCG
TATTGGTCTGGGATTCGATAAGCAAATTTTGCTGCGCGCCTTACGCCCACTGCCGCAAATTTTGGCCTCAATCTTTGCTT
TGCTGGCAATTTGTGCCGGGATGGCATGGGGGCTAACTTACTTTATGCAGATTGATTTTATGACTGCCTATCTCGCCACA
AGCCCTGGTGGACTTGATACAGTGGCAGTCATTGCCGCAGGGAGCAACGCCGATATGGCGCTCATTATGGCGATGCAAAC
CCTGCGGTTGTTTAGCATTTTACTGACGGGGCCAGCCATTGCGCGGTTTATCTCAACATATGCGCCGAAACGAACAACTT
AG

Upstream 100 bases:

>100_bases
GTGCTGTTTAAAATTAACTACAACTGATCGCCTGTACTGCCCTTTTCCACCCAGAGGGGCAGACTTCTCAACTATTTTGC
TATTTTTCAAATTTTCTTGA

Downstream 100 bases:

>100_bases
GACAATGCCCGGCCGCAGTATGGCTGCGAGTGATAGTCAACACAATGCACCAGGTTATTAATGTGTCGCTCCACCTGCCA
CGATAATATCGGCATCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MLIFFLNLAFFMLYRYIRGSCGEHGMPVLQWSLLFLLSILLSVLFLALHLPAALLLGPMVAGIIISMKGATLQLPRSAFL
AAQAILGCMIAQNLTGSILTTLAQNWPVVLGILLITLFSSAAVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGAD
IRLVAFMQYLRVLFVAGAAVLVTRIIMGDSAETTSQQMVWFPPVSLNLLSTLILASVTGFIGIKLRIPSGTMLLPMLTGA
FLQSGEIITIEMPEWLLALAYMGIGWRIGLGFDKQILLRALRPLPQILASIFALLAICAGMAWGLTYFMQIDFMTAYLAT
SPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRTT

Sequences:

>Translated_373_residues
MLIFFLNLAFFMLYRYIRGSCGEHGMPVLQWSLLFLLSILLSVLFLALHLPAALLLGPMVAGIIISMKGATLQLPRSAFL
AAQAILGCMIAQNLTGSILTTLAQNWPVVLGILLITLFSSAAVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGAD
IRLVAFMQYLRVLFVAGAAVLVTRIIMGDSAETTSQQMVWFPPVSLNLLSTLILASVTGFIGIKLRIPSGTMLLPMLTGA
FLQSGEIITIEMPEWLLALAYMGIGWRIGLGFDKQILLRALRPLPQILASIFALLAICAGMAWGLTYFMQIDFMTAYLAT
SPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRTT
>Mature_373_residues
MLIFFLNLAFFMLYRYIRGSCGEHGMPVLQWSLLFLLSILLSVLFLALHLPAALLLGPMVAGIIISMKGATLQLPRSAFL
AAQAILGCMIAQNLTGSILTTLAQNWPVVLGILLITLFSSAAVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGAD
IRLVAFMQYLRVLFVAGAAVLVTRIIMGDSAETTSQQMVWFPPVSLNLLSTLILASVTGFIGIKLRIPSGTMLLPMLTGA
FLQSGEIITIEMPEWLLALAYMGIGWRIGLGFDKQILLRALRPLPQILASIFALLAICAGMAWGLTYFMQIDFMTAYLAT
SPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRTT

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=347, Percent_Identity=85.5907780979827, Blast_Score=566, Evalue=1e-162,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 39992; Mature: 39992

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIFFLNLAFFMLYRYIRGSCGEHGMPVLQWSLLFLLSILLSVLFLALHLPAALLLGPMV
CEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIIISMKGATLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAQNWPVVLGILLITLFSS
HHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHH
AAVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAV
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LVTRIIMGDSAETTSQQMVWFPPVSLNLLSTLILASVTGFIGIKLRIPSGTMLLPMLTGA
HHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHH
FLQSGEIITIEMPEWLLALAYMGIGWRIGLGFDKQILLRALRPLPQILASIFALLAICAG
HHCCCCEEEEECHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAWGLTYFMQIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAI
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHH
ARFISTYAPKRTT
HHHHHHCCCCCCC
>Mature Secondary Structure
MLIFFLNLAFFMLYRYIRGSCGEHGMPVLQWSLLFLLSILLSVLFLALHLPAALLLGPMV
CEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIIISMKGATLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAQNWPVVLGILLITLFSS
HHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHH
AAVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAV
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LVTRIIMGDSAETTSQQMVWFPPVSLNLLSTLILASVTGFIGIKLRIPSGTMLLPMLTGA
HHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHH
FLQSGEIITIEMPEWLLALAYMGIGWRIGLGFDKQILLRALRPLPQILASIFALLAICAG
HHCCCCEEEEECHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAWGLTYFMQIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAI
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHH
ARFISTYAPKRTT
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]