| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549444
Identifier: 218549444
GI number: 218549444
Start: 2140610
End: 2141467
Strand: Reverse
Name: 218549444
Synonym: EFER_2113
Alternate gene names: NA
Gene position: 2141467-2140610 (Counterclockwise)
Preceding gene: 218549445
Following gene: 218549443
Centisome position: 46.67
GC content: 30.65
Gene sequence:
>858_bases ATGGTCTTAATTATAATAAATAAACTAAATGGATATTTATATAGGATGAATCATAGTGTAGCAATAATAATGAGCGTCTA CTTTTCTGAGAAACCAGATTATTTGAAACAAAGCCTTTCTAGTTTGTTTACTCAAACTATGAATGCAGATATTTATCTCT ATGTAGACGGTGATTTGAATGAATTATTAGAAGATGTAATTAAAGGTTTTAAAGTTCACTCTAATTTCTTTGTTATTCGT GGTAAGGTTAACAAAGGCCTTGCATTTGCACTCAATACTTTGATTGATATAACTTTGAATAAAGGTTATAAGTATATTGC TCGGATGGATACTGATGATATTTCACGTTCGAATCGAATTGAGCAGCAATTCAGATTCATGGAGGAAAATAAAGGAATTG ATGTGCTTGGTACTTTTTGTCACGAATTCGGCAGCGAATATGCATTAGAGTTAAAGGCAGTACCTATCAAGCATGATGAG TTGAAGAAGTATAGTATAATACGTTGCCCCTTCATACACCCAACTGTTATATTTAGAAGTTCAATTTTTAAAGATGGAAT CCGTTATCCGTTGAACACTAAATTTACTGAAGATATGGCGTTATGGTTTTGTCTTCTTGAGGAGGGATATCATTTCCATA ATTTACCTGAGGTATTATTAGATTATAGAATTGATGAAAATACATTTTCTCGGAGAAGGGGGCTTAGAAAAGCAATAAGT GAGTTTTCTATTCGTTTTAAATATATGATAAAACTCAGGGAGTTTAATATTAATAACAGTATTGTTTTGCTTGGAAAGTT TTGTTTTCATATATTGCCTTTATTTATTATTCGATACGCATATAAAAAATATCGTTAA
Upstream 100 bases:
>100_bases AATGTAGAATCGCGTGGCGATATTAAACTCATGATTATGAAAACAGATGAAATATTAAGAATATTAAACTAACTTTGAGC ATAAGGCCATGTTATAAAAC
Downstream 100 bases:
>100_bases ATTAATCTTTGAAAGTTCATAAAATGAATAGTAGAGAACATAGAAATAACTGTTTTGATATAATTAGATTGTTTGCAGCA ATTATTGTAATTATTTCTCA
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MVLIIINKLNGYLYRMNHSVAIIMSVYFSEKPDYLKQSLSSLFTQTMNADIYLYVDGDLNELLEDVIKGFKVHSNFFVIR GKVNKGLAFALNTLIDITLNKGYKYIARMDTDDISRSNRIEQQFRFMEENKGIDVLGTFCHEFGSEYALELKAVPIKHDE LKKYSIIRCPFIHPTVIFRSSIFKDGIRYPLNTKFTEDMALWFCLLEEGYHFHNLPEVLLDYRIDENTFSRRRGLRKAIS EFSIRFKYMIKLREFNINNSIVLLGKFCFHILPLFIIRYAYKKYR
Sequences:
>Translated_285_residues MVLIIINKLNGYLYRMNHSVAIIMSVYFSEKPDYLKQSLSSLFTQTMNADIYLYVDGDLNELLEDVIKGFKVHSNFFVIR GKVNKGLAFALNTLIDITLNKGYKYIARMDTDDISRSNRIEQQFRFMEENKGIDVLGTFCHEFGSEYALELKAVPIKHDE LKKYSIIRCPFIHPTVIFRSSIFKDGIRYPLNTKFTEDMALWFCLLEEGYHFHNLPEVLLDYRIDENTFSRRRGLRKAIS EFSIRFKYMIKLREFNINNSIVLLGKFCFHILPLFIIRYAYKKYR >Mature_285_residues MVLIIINKLNGYLYRMNHSVAIIMSVYFSEKPDYLKQSLSSLFTQTMNADIYLYVDGDLNELLEDVIKGFKVHSNFFVIR GKVNKGLAFALNTLIDITLNKGYKYIARMDTDDISRSNRIEQQFRFMEENKGIDVLGTFCHEFGSEYALELKAVPIKHDE LKKYSIIRCPFIHPTVIFRSSIFKDGIRYPLNTKFTEDMALWFCLLEEGYHFHNLPEVLLDYRIDENTFSRRRGLRKAIS EFSIRFKYMIKLREFNINNSIVLLGKFCFHILPLFIIRYAYKKYR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 33743; Mature: 33743
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLIIINKLNGYLYRMNHSVAIIMSVYFSEKPDYLKQSLSSLFTQTMNADIYLYVDGDLN CEEEEEECCCCEEEEECCCEEEEEEEHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHH ELLEDVIKGFKVHSNFFVIRGKVNKGLAFALNTLIDITLNKGYKYIARMDTDDISRSNRI HHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHEEEECCCEEEEEECCCHHCHHHHHH EQQFRFMEENKGIDVLGTFCHEFGSEYALELKAVPIKHDELKKYSIIRCPFIHPTVIFRS HHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHCEEEEECCCCCHHHHHHH SIFKDGIRYPLNTKFTEDMALWFCLLEEGYHFHNLPEVLLDYRIDENTFSRRRGLRKAIS HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH EFSIRFKYMIKLREFNINNSIVLLGKFCFHILPLFIIRYAYKKYR HHHHEEEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVLIIINKLNGYLYRMNHSVAIIMSVYFSEKPDYLKQSLSSLFTQTMNADIYLYVDGDLN CEEEEEECCCCEEEEECCCEEEEEEEHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHH ELLEDVIKGFKVHSNFFVIRGKVNKGLAFALNTLIDITLNKGYKYIARMDTDDISRSNRI HHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHEEEECCCEEEEEECCCHHCHHHHHH EQQFRFMEENKGIDVLGTFCHEFGSEYALELKAVPIKHDELKKYSIIRCPFIHPTVIFRS HHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHCEEEEECCCCCHHHHHHH SIFKDGIRYPLNTKFTEDMALWFCLLEEGYHFHNLPEVLLDYRIDENTFSRRRGLRKAIS HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHH EFSIRFKYMIKLREFNINNSIVLLGKFCFHILPLFIIRYAYKKYR HHHHEEEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]