| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is cpsG [H]
Identifier: 218549445
GI number: 218549445
Start: 2141496
End: 2142863
Strand: Reverse
Name: cpsG [H]
Synonym: EFER_2114
Alternate gene names: 218549445
Gene position: 2142863-2141496 (Counterclockwise)
Preceding gene: 218549446
Following gene: 218549444
Centisome position: 46.7
GC content: 53.07
Gene sequence:
>1368_bases ATGAAAAAATTAACCTGCTTTAAAGCCTACGATATTCGCGGAAAATTAGGCGAAGAACTGAATGAAGATATCGCCTGGCG TATTGGGCGTGCCTATGGCGAATTTCTCAAACCGAAAACCATTGTTTTAGGCGGTGATGTCCGTCTCACCAGCGAAACCT TAAAACTGGCGCTGGCAAAAGGGTTACAGGATGCGGGCGTTGACGTGCTGGATATCGGCATGTCCGGCACTGAAGAGATC TATTTCGCCACGTTCCATCTCGGTGTGGATGGCGGCATCGAAGTTACCGCCAGCCATAACCCGATGGATTATAACGGCAT GAAGCTGGTGCGCGAAGGGGCTCGCCCGATCAGCGGTGATACCGGACTGCGCGACGTCCAGCGTCTGGCAGAAGCCAACG ACTTCCCTCCCGTCGATGAAACCAAACGTGGTCGCTATCAGCAAATCAACCTACGTGACGCATATGTTGATCACCTGTTC GGTTATATCAATGTCAAAAACCTCACGCCGCTCAAGCTGGTAATCAACTCAGGGAACGGTGCGGCGGGTCCGGTGGTGGA CGCCATCGAAGCCCGCTTTAAAGCCCTCGGCGCACCCGTGGAATTGATCAAAGTACACAACACGCCGGACGGCAATTTCC CCAACGGTATTCCTAATCCATTGCTGCCGGAATGCCGCGACGATACCCGCAATGCGGTCATTAAACACGGCGCGGATATG GGTATTGCTTTTGATGGCGATTTTGACCGCTGTTTCCTGTTTGACGAAAAAGGACAGTTTATCGAGGGCTACTACATTGT CGGCCTGCTGGCAGAAGCGTTCCTCGAAAAAAATCCCGGCGCGAAGATCATCCACGATCCGCGTCTTTCCTGGAACACCG TTGATGTAGTGACTGCCGCAGGCGGCACCCCGGTGATGTCGAAAACCGGACACGCCTTTATTAAAGAACGTATGCGCAAG GAAGACGCCATCTACGGTGGCGAAATGAGCGCCCACCATTACTTCCGTGATTTCGCTTACTGCGACAGCGGCATGATCCC GTGGCTGCTGGTCGCCGAACTGGTGTGCCTGAAAGGAAAAACGCTGGGCGAACTGGTGCGCGACCGCATGGCTGCATTCC CGGCAAGCGGTGAGATCAACAGCAAACTGGTGCAACCCGTTGAGGCGATTAATCGCGTCGAACAGCATTTTAGCCGCGAG GCGCTGGCGGTGGATCGCACCGATGGCATCAGCATGACCTTTGCCGACTGGCGCTTTAACCTGCGTTCCTCCAACACCGA ACCGGTGGTGCGGTTGAATGTAGAATCGCGTGGCGATATTAAACTCATGATTATGAAAACAGATGAAATATTAAGAATAT TAAACTAA
Upstream 100 bases:
>100_bases CGTAATTCCTCTTAATCTTATTGAGGTTAGTTCCGGAGATTATTTAGGTGAGGATGATATTGTTCGTCAAAAAGAACGTT ACAAAATAGATGACTAATAG
Downstream 100 bases:
>100_bases CTTTGAGCATAAGGCCATGTTATAAAACATGGTCTTAATTATAATAAATAAACTAAATGGATATTTATATAGGATGAATC ATAGTGTAGCAATAATAATG
Product: phosphomannomutase
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEI YFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLF GYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADM GIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRK EDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGKTLGELVRDRMAAFPASGEINSKLVQPVEAINRVEQHFSRE ALAVDRTDGISMTFADWRFNLRSSNTEPVVRLNVESRGDIKLMIMKTDEILRILN
Sequences:
>Translated_455_residues MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEI YFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLF GYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADM GIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRK EDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGKTLGELVRDRMAAFPASGEINSKLVQPVEAINRVEQHFSRE ALAVDRTDGISMTFADWRFNLRSSNTEPVVRLNVESRGDIKLMIMKTDEILRILN >Mature_455_residues MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEI YFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLF GYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADM GIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRK EDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGKTLGELVRDRMAAFPASGEINSKLVQPVEAINRVEQHFSRE ALAVDRTDGISMTFADWRFNLRSSNTEPVVRLNVESRGDIKLMIMKTDEILRILN
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O antigen [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=455, Percent_Identity=97.1428571428571, Blast_Score=912, Evalue=0.0, Organism=Escherichia coli, GI1789566, Length=452, Percent_Identity=26.5486725663717, Blast_Score=82, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 50393; Mature: 50393
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAK CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECHHHHHHHHHH GLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGD CHHHCCCCEEEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHCCCCCCCC TGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLFGYINVKNLTPLKLVINSGNG CCHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHEEEECCCCEEEEEEECCCC AAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADM CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC GIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTAA EEEECCCCCEEEEECCCCCEECHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEC GGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGK CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC TLGELVRDRMAAFPASGEINSKLVQPVEAINRVEQHFSREALAVDRTDGISMTFADWRFN HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEEEEEEEEE LRSSNTEPVVRLNVESRGDIKLMIMKTDEILRILN ECCCCCCCEEEEEECCCCCEEEEEECCHHHHHHCC >Mature Secondary Structure MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAK CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECHHHHHHHHHH GLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGD CHHHCCCCEEEECCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHCCCCCCCC TGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLFGYINVKNLTPLKLVINSGNG CCHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHEEEECCCCEEEEEEECCCC AAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADM CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC GIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTAA EEEECCCCCEEEEECCCCCEECHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEC GGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGK CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC TLGELVRDRMAAFPASGEINSKLVQPVEAINRVEQHFSREALAVDRTDGISMTFADWRFN HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEEEEEEEEE LRSSNTEPVVRLNVESRGDIKLMIMKTDEILRILN ECCCCCCCEEEEEECCCCCEEEEEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9673232; 10222209; 11206551; 11258796 [H]