| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218548664
Identifier: 218548664
GI number: 218548664
Start: 1336404
End: 1337114
Strand: Reverse
Name: 218548664
Synonym: EFER_1298
Alternate gene names: NA
Gene position: 1337114-1336404 (Counterclockwise)
Preceding gene: 218548665
Following gene: 218548663
Centisome position: 29.14
GC content: 45.29
Gene sequence:
>711_bases GTGAGTAAAGTTCCTCCTCTTTTAGCCGCTATTATTCTTGGTGCCGGTATCGCCGTTTGTGGTTATTTCGTTGGTGATGG TATCCAGCATTTAAAACCCAATAATCGTTACGTTAATGTCCGGGGCTTGTCTGAAAAAGAAGTTCAGGCCGATACAGCAG AGTTAACTGTATCAATCACCCGTAATGCCAATGTTACCGAAGAATTATTCCCGAAACTGGATGCCGTACAAAATCAAATT ATTGCCACATTTAAATCTCTTGGAATTAAGGATGATGAAATCCAGCCAGGGCAGTGGATAACCAAACGGACAGATCGCTA TTACCTGCAAGACGATCCCAATCTGCCGCGTCTTAATGTTTATGGTTCTGTCACGGTAAAAACTCATAACGTTGTGGCTG TTGAAAAAGCGGTGGCCAAAATCAACGAGTTACAAACCGCAACCAATGGTGCCATTACAGACACATCCCTCTTCTATAGC TTCAATGGTATCAGTGCATTACGCGCAGAAATGATCGCTGCCGCCACCAAAGATGCCCGTAACGCGGCACTGCAATTCGC TGCCGATTCTGGTAGCCAGGTAGGATCAATCAGAGATGCGTCACAAGGGGTATTCCAGATCCTTGCCAGTGGTAGCGACA ACGATGATCCCGCATCAGTGAAAAAAACTGTTCGGGTAGTGACCACCGTAACTTATGAGCTGAAAGATTAA
Upstream 100 bases:
>100_bases GGCCACATTTTTTTGTCTCCAGAATCAGACTGTTTTTCACGGCATAACAAGACTAGAGTGCCTTCGCTCAGGTGAAAATC AATGTGATAAGGAGACATCA
Downstream 100 bases:
>100_bases GTGCAATAAATATTAAATTTGCTCTCGTTGAGTATTCAACCAAAGGCGGCAAATGCTGCCTTTTTATAATCCTGACGTTA TACTTCTCCCCGCTAATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSKVPPLLAAIILGAGIAVCGYFVGDGIQHLKPNNRYVNVRGLSEKEVQADTAELTVSITRNANVTEELFPKLDAVQNQI IATFKSLGIKDDEIQPGQWITKRTDRYYLQDDPNLPRLNVYGSVTVKTHNVVAVEKAVAKINELQTATNGAITDTSLFYS FNGISALRAEMIAAATKDARNAALQFAADSGSQVGSIRDASQGVFQILASGSDNDDPASVKKTVRVVTTVTYELKD
Sequences:
>Translated_236_residues MSKVPPLLAAIILGAGIAVCGYFVGDGIQHLKPNNRYVNVRGLSEKEVQADTAELTVSITRNANVTEELFPKLDAVQNQI IATFKSLGIKDDEIQPGQWITKRTDRYYLQDDPNLPRLNVYGSVTVKTHNVVAVEKAVAKINELQTATNGAITDTSLFYS FNGISALRAEMIAAATKDARNAALQFAADSGSQVGSIRDASQGVFQILASGSDNDDPASVKKTVRVVTTVTYELKD >Mature_235_residues SKVPPLLAAIILGAGIAVCGYFVGDGIQHLKPNNRYVNVRGLSEKEVQADTAELTVSITRNANVTEELFPKLDAVQNQII ATFKSLGIKDDEIQPGQWITKRTDRYYLQDDPNLPRLNVYGSVTVKTHNVVAVEKAVAKINELQTATNGAITDTSLFYSF NGISALRAEMIAAATKDARNAALQFAADSGSQVGSIRDASQGVFQILASGSDNDDPASVKKTVRVVTTVTYELKD
Specific function: Unknown
COG id: COG2859
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25446; Mature: 25315
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVPPLLAAIILGAGIAVCGYFVGDGIQHLKPNNRYVNVRGLSEKEVQADTAELTVSIT CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHCCCCEEEEEEEE RNANVTEELFPKLDAVQNQIIATFKSLGIKDDEIQPGQWITKRTDRYYLQDDPNLPRLNV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEE YGSVTVKTHNVVAVEKAVAKINELQTATNGAITDTSLFYSFNGISALRAEMIAAATKDAR EEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEECCEEEEEECCHHHHHHHHHHHHHHHHH NAALQFAADSGSQVGSIRDASQGVFQILASGSDNDDPASVKKTVRVVTTVTYELKD HHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEEEEEEEECC >Mature Secondary Structure SKVPPLLAAIILGAGIAVCGYFVGDGIQHLKPNNRYVNVRGLSEKEVQADTAELTVSIT CCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHCCCCEEEEEEEE RNANVTEELFPKLDAVQNQIIATFKSLGIKDDEIQPGQWITKRTDRYYLQDDPNLPRLNV CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEE YGSVTVKTHNVVAVEKAVAKINELQTATNGAITDTSLFYSFNGISALRAEMIAAATKDAR EEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEECCEEEEEECCHHHHHHHHHHHHHHHHH NAALQFAADSGSQVGSIRDASQGVFQILASGSDNDDPASVKKTVRVVTTVTYELKD HHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA