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The map label for this gene is yfbS [H]

Identifier: 218548259

GI number: 218548259

Start: 890259

End: 892091

Strand: Direct

Name: yfbS [H]

Synonym: EFER_0877

Alternate gene names: 218548259

Gene position: 890259-892091 (Clockwise)

Preceding gene: 218548258

Following gene: 218548262

Centisome position: 19.4

GC content: 48.99

Gene sequence:

>1833_bases
GTGAACGGTGAATTAATCTGGGTTCTGTCATTATTAGTAATTGCCGTCATTATGTTTGCGACGGGCAAAGTGCGTATGGA
TGCCGTTGCTTTGTTCGTCATTGTTGCGTTTGTGCTCAGTGGCACGCTCACCATTTCAGAAGCCTTTTCAGGTTTTAGTG
ATCCCAATGTCGTGTTAATTGCTGCCTTATTTATCATCGGCGATGGTCTGGTGCGTACTGGTGTAGCAACGGTAATGGGG
GCCTGGCTGGTAAAAGTGGCTGGCAGCAGTGAAATTAAGATGCTGGTTTTGCTGATGTTAACCGTTGCCGGGCTGGGGGC
ATTCATGAGCTCTACTGGCGTGGTGGCAATTTTTATTCCTGTTGTATTAAGTGTCTCAATGCGAATGCAAACCTCACCGT
CACGTCTGATGATGCCTTTGAGTTTTGCAGGTCTGATTAGTGGCATGATGACGCTGGTGGCGACACCACCTAACCTGGTC
GTAAACAGTGAACTGCTGCGTGAGGGGTTCCACGGTTTTAGCTTTTTTAGCGTAACGCCAATCGGTCTGGTTGTATTGGT
TTTTGGCATTCTTTATATGCTGGTTATGCGCTTTATGCTTAAAGGCGACAATCCCGCACAGCAAGGTGAGGGCTGGAAAA
GACGGACATTTCGCGACCTTATCAAAGAATACCGGCTCACCGGGCGAGCCCGGCGCCTCGCTATCCGCCCGGGATCTCCG
CTGGTTGGTCAACGACTCGATGATCTGAAATTGCGTGAACGCTACGGTGCGAACGTCATCGGTGTTGAACGCTGGCGACG
TTTTCGCCGCGTAATCGTGAACGTTAACGGGGTTTCTGAGTTTCGGGCACGTGATGTTTTGTTAATCGATATGTCTGCAG
CAGACGTCGATCTCCGACAATTTTGTAGTGAACAATTGCTTGAACCGATGGTTCTGCGGGGAGAATACTTTTCTGATCAA
GCCCTGGATGTGGGAATGGCGGAAATATCATTGATTCCTGAATCGGAGCTGATTGGCAAATCGGTACGTGAAATAGGTTT
TCGTACGCGCTATGGACTGAATGTCGTGGGCTTAAAACGAGACGGGGTCGCTCTGGAAGGTTCGCTGACAGATGAACCAC
TACGGCTGGGCGATATTATTCTGGTGGTGGGAAACTGGAAACTCATCGGTATGCTGGCGAAACAGGGGCGTGATTTTGTA
GTCCTGAATATGCCAGCCGAAGTCAGCGAAGCGTCTCCGGCTCACAGTCAGGCTCCCCATGCAATTTTCTGTCTGGTCCT
GATGATTGCTCTTATGCTTACCGATGAAATTCCTAATCCTATTGCCGCGATCATTGCCTGCCTGCTGATGGGAAAATTTC
GCTGTATTGATGCGGAAAGCGCATATAAAGCGATTCACTGGCCAAGCATAATTTTGATTGTCGGTATGATGCCCTTTGCT
TTGGCACTGCAAAAAACGGGCGGTGTTGATCTGGTCGTTAAAGGGTTGATGGAAGTCGGGGGTGGCAAAGGGCCTTATAT
TATGCTGGGCTGCTTATTCGTTTTATGCGCAGTGATTGGTTTGTTCATCTCTAACACAGCAACGGCGGTATTAATGGCTC
CTATCGCGTTGGCCGCAGCGAAAACTATGGGAGTTTCACCTTATCCTTTCGCGATGGTCGTCGCGATGGCTGCATCAGCG
GCCTTTATGACACCGGTATCTTCACCAGTAAACACACTTGTACTTGGTCCGGGCAATTATCGCTTCAGCGATTTTGTGAA
GATAGGTGTACCTTTCACTATTATCGTCATGGCGGTCTGTCTGGTGATTATTCCTGTGATGTTCCCATTTTGA

Upstream 100 bases:

>100_bases
TTATTATTCAGTGAAACACCTGAGTATGATTTAGCTCCGTTTTGGTGGTTTTGTTTTATGGCAGAATCTAGTAATTCTCA
TCATTTAACAAGGATGTATT

Downstream 100 bases:

>100_bases
CGTTCTGCCGGGTAAGCGCAGGCTTTACCCGGCAAGGCATTACAACGGAGAGTCCTGGCTGATTTCGTCGAGAGAAAGAT
GAAAACTGGGCACAAACACC

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MNGELIWVLSLLVIAVIMFATGKVRMDAVALFVIVAFVLSGTLTISEAFSGFSDPNVVLIAALFIIGDGLVRTGVATVMG
AWLVKVAGSSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIPVVLSVSMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
VNSELLREGFHGFSFFSVTPIGLVVLVFGILYMLVMRFMLKGDNPAQQGEGWKRRTFRDLIKEYRLTGRARRLAIRPGSP
LVGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQ
ALDVGMAEISLIPESELIGKSVREIGFRTRYGLNVVGLKRDGVALEGSLTDEPLRLGDIILVVGNWKLIGMLAKQGRDFV
VLNMPAEVSEASPAHSQAPHAIFCLVLMIALMLTDEIPNPIAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFA
LALQKTGGVDLVVKGLMEVGGGKGPYIMLGCLFVLCAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASA
AFMTPVSSPVNTLVLGPGNYRFSDFVKIGVPFTIIVMAVCLVIIPVMFPF

Sequences:

>Translated_610_residues
MNGELIWVLSLLVIAVIMFATGKVRMDAVALFVIVAFVLSGTLTISEAFSGFSDPNVVLIAALFIIGDGLVRTGVATVMG
AWLVKVAGSSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIPVVLSVSMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
VNSELLREGFHGFSFFSVTPIGLVVLVFGILYMLVMRFMLKGDNPAQQGEGWKRRTFRDLIKEYRLTGRARRLAIRPGSP
LVGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQ
ALDVGMAEISLIPESELIGKSVREIGFRTRYGLNVVGLKRDGVALEGSLTDEPLRLGDIILVVGNWKLIGMLAKQGRDFV
VLNMPAEVSEASPAHSQAPHAIFCLVLMIALMLTDEIPNPIAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFA
LALQKTGGVDLVVKGLMEVGGGKGPYIMLGCLFVLCAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASA
AFMTPVSSPVNTLVLGPGNYRFSDFVKIGVPFTIIVMAVCLVIIPVMFPF
>Mature_610_residues
MNGELIWVLSLLVIAVIMFATGKVRMDAVALFVIVAFVLSGTLTISEAFSGFSDPNVVLIAALFIIGDGLVRTGVATVMG
AWLVKVAGSSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIPVVLSVSMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
VNSELLREGFHGFSFFSVTPIGLVVLVFGILYMLVMRFMLKGDNPAQQGEGWKRRTFRDLIKEYRLTGRARRLAIRPGSP
LVGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQ
ALDVGMAEISLIPESELIGKSVREIGFRTRYGLNVVGLKRDGVALEGSLTDEPLRLGDIILVVGNWKLIGMLAKQGRDFV
VLNMPAEVSEASPAHSQAPHAIFCLVLMIALMLTDEIPNPIAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFA
LALQKTGGVDLVVKGLMEVGGGKGPYIMLGCLFVLCAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASA
AFMTPVSSPVNTLVLGPGNYRFSDFVKIGVPFTIIVMAVCLVIIPVMFPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=610, Percent_Identity=92.1311475409836, Blast_Score=1114, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680
- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 65937; Mature: 65937

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGELIWVLSLLVIAVIMFATGKVRMDAVALFVIVAFVLSGTLTISEAFSGFSDPNVVLI
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHH
AALFIIGDGLVRTGVATVMGAWLVKVAGSSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIP
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VVLSVSMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGFHGFSFFSVTP
HHHHHHHHCCCCCCHHEHHHHHHHHHHHHHHHHCCCCCCEECHHHHHCCCCCCEEHHHHH
IGLVVLVFGILYMLVMRFMLKGDNPAQQGEGWKRRTFRDLIKEYRLTGRARRLAIRPGSP
HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHEEEECCCCC
LVGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAADVDLRQ
HHHCCHHHHHHHHHHCCCEEEHHHHHHHHHHEEECCCCHHHCCCCEEEEECCCCCHHHHH
FCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPESELIGKSVREIGFRTRYGLNVVGLKR
HHHHHHHHHHHHCCCCCCCHHHHCCHHHEEECCCHHHHHHHHHHHCCHHHCCCEEEEEEC
DGVALEGSLTDEPLRLGDIILVVGNWKLIGMLAKQGRDFVVLNMPAEVSEASPAHSQAPH
CCEEEECCCCCCCEEECCEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCH
AIFCLVLMIALMLTDEIPNPIAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHCCHHHHHHHHHHHHH
LALQKTGGVDLVVKGLMEVGGGKGPYIMLGCLFVLCAVIGLFISNTATAVLMAPIALAAA
HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGNYRFSDFVKIGVPFTIIVMAVC
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHEEECCCHHHHHHHHH
LVIIPVMFPF
HHHHHHHCCC
>Mature Secondary Structure
MNGELIWVLSLLVIAVIMFATGKVRMDAVALFVIVAFVLSGTLTISEAFSGFSDPNVVLI
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHH
AALFIIGDGLVRTGVATVMGAWLVKVAGSSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIP
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VVLSVSMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGFHGFSFFSVTP
HHHHHHHHCCCCCCHHEHHHHHHHHHHHHHHHHCCCCCCEECHHHHHCCCCCCEEHHHHH
IGLVVLVFGILYMLVMRFMLKGDNPAQQGEGWKRRTFRDLIKEYRLTGRARRLAIRPGSP
HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHEEEECCCCC
LVGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAADVDLRQ
HHHCCHHHHHHHHHHCCCEEEHHHHHHHHHHEEECCCCHHHCCCCEEEEECCCCCHHHHH
FCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPESELIGKSVREIGFRTRYGLNVVGLKR
HHHHHHHHHHHHCCCCCCCHHHHCCHHHEEECCCHHHHHHHHHHHCCHHHCCCEEEEEEC
DGVALEGSLTDEPLRLGDIILVVGNWKLIGMLAKQGRDFVVLNMPAEVSEASPAHSQAPH
CCEEEECCCCCCCEEECCEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCH
AIFCLVLMIALMLTDEIPNPIAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHCCHHHHHHHHHHHHH
LALQKTGGVDLVVKGLMEVGGGKGPYIMLGCLFVLCAVIGLFISNTATAVLMAPIALAAA
HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGNYRFSDFVKIGVPFTIIVMAVC
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHEEECCCHHHHHHHHH
LVIIPVMFPF
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]