| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yfbT [H]
Identifier: 218548258
GI number: 218548258
Start: 889522
End: 890172
Strand: Direct
Name: yfbT [H]
Synonym: EFER_0876
Alternate gene names: 218548258
Gene position: 889522-890172 (Clockwise)
Preceding gene: 218548257
Following gene: 218548259
Centisome position: 19.39
GC content: 51.46
Gene sequence:
>651_bases GTGCGGTGTAAAGGCTTTCTGTTTGACCTTGATGGTACGCTGGTTGATTCCTTACCGGCAGTAGAGCGTGCGTGGTGTAA CTGGGCCGATCGTTTTGGGATTGATCACCATGAGTTGTTGAGTTTCATTCATGGCAAACAGGCGATCACTTCTCTGCGCC ATTTTATGCCAGGAAGACCGGAGGAAGAGATACTGGCTGAATTTACCCGCCTGGAGCAGATCGAGGCGACGCAAACTGAA GGTATCACCGCACTACCAGGGGCGATTGAACTCCTCACTCATCTTAATAAATCAGGCATTCCATGGGCTATCGTTACTTC TGGCTCAATGCCGGTTGCACGTGCTCGCCATCAGGTTGCCGGGCTGCCATTCCCTGAAGTATTTGTTACCGCTGAACGGG TAAAAAGAGGGAAACCAGAACCGGATGCTTATCTCTTGGGGGCGCAACTGCTCGGCCTTGAACCAAAAGAGTGTGTTGTC GTGGAGGATGCCCCTGCGGGTGTACTTTCCGGGTTGGCTGCAGGTTGCCATGTCATTGCTGTGAATACGCCAGCAGACAC GCCGCGTTTGAGTGAGGTTGATTTTGTGCTGACCAGTTTGCAGCAAATCACCGTAACAAAGCAGCCGAATGGAGAAGTTA TTATTCAGTGA
Upstream 100 bases:
>100_bases AAGTACCAGCGAATGTTAAAAGTTTGGCATTCTTGCCCGCGTCAATACCACTTGAGCGCTAACGAAATTAATCAAATTAT CAACGCCTGAGGAGGCTGAT
Downstream 100 bases:
>100_bases AACACCTGAGTATGATTTAGCTCCGTTTTGGTGGTTTTGTTTTATGGCAGAATCTAGTAATTCTCATCATTTAACAAGGA TGTATTGTGAACGGTGAATT
Product: phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRCKGFLFDLDGTLVDSLPAVERAWCNWADRFGIDHHELLSFIHGKQAITSLRHFMPGRPEEEILAEFTRLEQIEATQTE GITALPGAIELLTHLNKSGIPWAIVTSGSMPVARARHQVAGLPFPEVFVTAERVKRGKPEPDAYLLGAQLLGLEPKECVV VEDAPAGVLSGLAAGCHVIAVNTPADTPRLSEVDFVLTSLQQITVTKQPNGEVIIQ
Sequences:
>Translated_216_residues MRCKGFLFDLDGTLVDSLPAVERAWCNWADRFGIDHHELLSFIHGKQAITSLRHFMPGRPEEEILAEFTRLEQIEATQTE GITALPGAIELLTHLNKSGIPWAIVTSGSMPVARARHQVAGLPFPEVFVTAERVKRGKPEPDAYLLGAQLLGLEPKECVV VEDAPAGVLSGLAAGCHVIAVNTPADTPRLSEVDFVLTSLQQITVTKQPNGEVIIQ >Mature_216_residues MRCKGFLFDLDGTLVDSLPAVERAWCNWADRFGIDHHELLSFIHGKQAITSLRHFMPGRPEEEILAEFTRLEQIEATQTE GITALPGAIELLTHLNKSGIPWAIVTSGSMPVARARHQVAGLPFPEVFVTAERVKRGKPEPDAYLLGAQLLGLEPKECVV VEDAPAGVLSGLAAGCHVIAVNTPADTPRLSEVDFVLTSLQQITVTKQPNGEVIIQ
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=216, Percent_Identity=31.4814814814815, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI207113149, Length=193, Percent_Identity=31.6062176165803, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI87082080, Length=216, Percent_Identity=85.6481481481482, Blast_Score=360, Evalue=1e-101, Organism=Escherichia coli, GI1789046, Length=195, Percent_Identity=29.2307692307692, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1790151, Length=221, Percent_Identity=28.5067873303167, Blast_Score=69, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321834, Length=229, Percent_Identity=32.7510917030568, Blast_Score=111, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6321833, Length=229, Percent_Identity=31.4410480349345, Blast_Score=104, Evalue=9e-24, Organism=Saccharomyces cerevisiae, GI6322136, Length=219, Percent_Identity=32.8767123287671, Blast_Score=90, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6320905, Length=219, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=5e-19, Organism=Drosophila melanogaster, GI20129151, Length=191, Percent_Identity=30.8900523560209, Blast_Score=77, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23505; Mature: 23505
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCKGFLFDLDGTLVDSLPAVERAWCNWADRFGIDHHELLSFIHGKQAITSLRHFMPGRP CCCCCEEEECCCHHHHHCHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC EEEILAEFTRLEQIEATQTEGITALPGAIELLTHLNKSGIPWAIVTSGSMPVARARHQVA HHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHC GLPFPEVFVTAERVKRGKPEPDAYLLGAQLLGLEPKECVVVEDAPAGVLSGLAAGCHVIA CCCCHHHHHHHHHHHCCCCCCCCEEECHHHHCCCCCCEEEECCCCHHHHHHHHCCCEEEE VNTPADTPRLSEVDFVLTSLQQITVTKQPNGEVIIQ EECCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEC >Mature Secondary Structure MRCKGFLFDLDGTLVDSLPAVERAWCNWADRFGIDHHELLSFIHGKQAITSLRHFMPGRP CCCCCEEEECCCHHHHHCHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC EEEILAEFTRLEQIEATQTEGITALPGAIELLTHLNKSGIPWAIVTSGSMPVARARHQVA HHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHC GLPFPEVFVTAERVKRGKPEPDAYLLGAQLLGLEPKECVVVEDAPAGVLSGLAAGCHVIA CCCCHHHHHHHHHHHCCCCCCCCEEECHHHHCCCCCCEEEECCCCHHHHHHHHCCCEEEE VNTPADTPRLSEVDFVLTSLQQITVTKQPNGEVIIQ EECCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]