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The map label for this gene is 218235473

Identifier: 218235473

GI number: 218235473

Start: 3793350

End: 3794912

Strand: Reverse

Name: 218235473

Synonym: BCB4264_A3877

Alternate gene names: NA

Gene position: 3794912-3793350 (Counterclockwise)

Preceding gene: 218235829

Following gene: 218235021

Centisome position: 70.03

GC content: 40.18

Gene sequence:

>1563_bases
ATGACGAGTACAGTTTGGATACTCATCTCCATTTTGCTTGCAACAGTCGGTGCAGTTGTTGGCTTTTTTGTTCGAAAGTC
TATTGCTGAAGCGAAGATTAATGGTGCGGCTAATGAAGCGAGACGTATTTTAGACGAAGCGAATCGTGATGCTGAAGCAC
TTAAGAAAGAAGCGCTTTTAGAAGCAAAGGATGAAATTCATACACTTCGTACAGAAGCTGAATTAGAAATTCGTGACCGT
AGAAGCGAATTACAAAAACAAGAAAATCGTTTAATGCAAAAAGAAGAGAACCTTGATCGTAAAGACGAAACGCTCGATAA
ACGCGAGCAACAGTTAGAGAAGAAAGAGGAATCTCTTGTAGCGAGACAACAACAGATTGAAGAGTTGGAAAGCAAAGTGG
GAGAGTTAGTTCAAAAGCAACAAACAGAATTAGAGCGCATTTCCAATCTGACACGCGAACAAGCGAAAGCAATTATTCTT
GGTAAAGTAGAAAGTGAAGTTTCTCATGAAATCGCTGTTATGGTAAAAGAAAGTGAAGTTCGCGCGAAAGAAGAAGCGGA
TAAGAAAGCAAAAGAGATTTTATCTCTTGCAATGCAAAGGTGTGCAGCTGATCATGTTGCTGAAACAACCGTTTCGGTTG
TAAATCTTCCAAATGACGAAATGAAGGGACGTATTATCGGGCGTGAAGGTCGTAATATTCGTACGTTAGAAACGTTAACG
GGTATTGACTTAATTATCGATGATACACCAGAGGCGGTAATCCTTTCTGGATTCGACCCAATTCGTCGTGAAACAGCTCG
TATCGCTCTTGATAAACTAGTACAGGACGGACGTATTCACCCAGCGCGTATTGAAGAGATGGTCGAAAAATCAAGACGTG
AAGTGGACGAGTATATTCGCGAAGTCGGAGAGCAAACAACGTTTGAAGTGGGTGTTCACGGATTACATCCAGATTTAATT
AAAATTTTAGGTCGTTTAAAATACCGTACAAGTTATGGTCAAAACGTCTTAAAACACTCTATGGAAGTTGCATATTTAAC
TGGACTTATGGCGGCAGAGCTTGGCGAGGATGAAAAACTAGCAAGACGTGCAGGTCTATTACATGATATCGGAAAAGCGA
TTGACCATGAAGTAGAAGGAAGCCACGTTGAAATTGGTGTTGAACTTGCAACGAAATATAAAGAGCATCCTGTAGTTATA
AACAGTATTGCATCTCACCATGGTGACACAGAACCAACTTCTATCATTGCAGTTTTAGTTGCAGCAGCAGATGCTTTATC
AGCTGCAAGACCGGGAGCTCGTAGTGAAACACTTGAAAACTATATTCGTCGTCTTGAAAAGTTAGAAGAGATTTCAGAGT
CTTATGAAGGCGTTGAAAAGTCATTTGCAATTCAAGCAGGACGTGAAGTTCGTATTTTGGTAAAACCAGATACAATCGAT
GACTTAGAAGCTCATCGTTTAGCTCGTGATATCCGAAAACGTATTGAAAATGAACTGGATTACCCAGGACATATTAAAGT
AACTGTTATTCGTGAAACACGTGCAGTGGAATACGCAAAATAA

Upstream 100 bases:

>100_bases
AAGTCCCTTAAAAAAGCGGGACGACGGTCTTTGCTGTATGTTGTAATTCAATGTACATGCCGACAGTCTTTTTTCATTCA
TAGCAAGGGGAGGTGAAATC

Downstream 100 bases:

>100_bases
AGTGGTGAAACACCACTTTATTTTTTTGTGTTGGAATTGGATAAAATAAAGACAGTTAGTTATATAGTATAAAAGTGAAA
CAAACTTATAATAAACATAT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MTSTVWILISILLATVGAVVGFFVRKSIAEAKINGAANEARRILDEANRDAEALKKEALLEAKDEIHTLRTEAELEIRDR
RSELQKQENRLMQKEENLDRKDETLDKREQQLEKKEESLVARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIIL
GKVESEVSHEIAVMVKESEVRAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIREVGEQTTFEVGVHGLHPDLI
KILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEKLARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVI
NSIASHHGDTEPTSIIAVLVAAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTID
DLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK

Sequences:

>Translated_520_residues
MTSTVWILISILLATVGAVVGFFVRKSIAEAKINGAANEARRILDEANRDAEALKKEALLEAKDEIHTLRTEAELEIRDR
RSELQKQENRLMQKEENLDRKDETLDKREQQLEKKEESLVARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIIL
GKVESEVSHEIAVMVKESEVRAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIREVGEQTTFEVGVHGLHPDLI
KILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEKLARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVI
NSIASHHGDTEPTSIIAVLVAAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTID
DLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
>Mature_519_residues
TSTVWILISILLATVGAVVGFFVRKSIAEAKINGAANEARRILDEANRDAEALKKEALLEAKDEIHTLRTEAELEIRDRR
SELQKQENRLMQKEENLDRKDETLDKREQQLEKKEESLVARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILG
KVESEVSHEIAVMVKESEVRAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIREVGEQTTFEVGVHGLHPDLIK
ILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEKLARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVIN
SIASHHGDTEPTSIIAVLVAAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTIDD
LEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA [H]

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1 [H]

EC number: =3.1.4.16 [H]

Molecular weight: Translated: 58661; Mature: 58529

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTVWILISILLATVGAVVGFFVRKSIAEAKINGAANEARRILDEANRDAEALKKEALL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH
EAKDEIHTLRTEAELEIRDRRSELQKQENRLMQKEENLDRKDETLDKREQQLEKKEESLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVESEVSHEIAVMVKESEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHEEEEHHHH
RAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCEECCCCCCCCHHHHHC
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIR
CCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEKL
HHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV
HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHH
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTID
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
DLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
TSTVWILISILLATVGAVVGFFVRKSIAEAKINGAANEARRILDEANRDAEALKKEALL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH
EAKDEIHTLRTEAELEIRDRRSELQKQENRLMQKEENLDRKDETLDKREQQLEKKEESLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVESEVSHEIAVMVKESEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHEEEEHHHH
RAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCEECCCCCCCCHHHHHC
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIR
CCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEKL
HHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV
HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHH
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTID
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
DLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA