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The map label for this gene is ymdB [H]

Identifier: 218235021

GI number: 218235021

Start: 3792393

End: 3793187

Strand: Reverse

Name: ymdB [H]

Synonym: BCB4264_A3876

Alternate gene names: 218235021

Gene position: 3793187-3792393 (Counterclockwise)

Preceding gene: 218235473

Following gene: 218232372

Centisome position: 70.0

GC content: 37.74

Gene sequence:

>795_bases
ATGAGAATATTATTTGTTGGGGATGTAGTAGGATCTCCTGGTAGAGGTATGATTCAACAATACGTACCGGCATTAAAGAA
AAAATATACACCTACAGTAACAATCATTAATGGAGAAAACGCAGCAGGTGGCCGTGGGATTACAGAAAAAATATATCGAA
ACTTTTTAGAGTGTGGAGCGCAAGCAGTTACACTTGGAAACCATGCTTGGGATAATCGTGAAGTATTTGAATTCATCGAT
GATGCAAAATATCTTGCAAGACCAGCTAACTTCCCAGAAGGAACTCCAGGAAAAGGACTTATCTTTGTGAACTGTAATGG
AACAGAAGTTGCAGTTATTAACTTACAAGGACGTACTTTCCTTCCTCCGATTGATTGTCCATTCCGTAAAGTGGATGAAT
TAATTAATATTGCGAAAAAACGTACGAATATTATCTTTGTTGACTTCCATGCGGAAACTACAAGTGAAAAACAAGCGCTA
GGTTGGTATGTAGATGGACGTGCTACAGCAGTAGTAGGTACGCATACGCATGTCCCTACAGCAGATAACCGTATTTTACC
AAGCGGAACGGCATACATTACAGATGTTGGAATGACAGGGCCGTATGATGGAATATTAGGTATGGATAGAGAAGCAGTAT
TGAAGAAGTTTTTAACAAACTTACCAGTACGATTTGAAGTAACAAATGGTAGAACGCAATTAAGTGCAGTGTTAATTGAT
GTGGATCCAAATACAGGAAAAGCAAAGAAAATTGAACGTATTTTAATTAATGACGATCAACCATTTTTTGAGTAA

Upstream 100 bases:

>100_bases
TATAGTATAAAAGTGAAACAAACTTATAATAAACATATTATAAGGAATTTACTTGATGCTATAGCAATAAAAAATGCAGT
ACATAGAAAGGGTAAGACAT

Downstream 100 bases:

>100_bases
ATTCCCGTTAAATTTTAGATAAGTTATTATATTTTAATTTTTTAGAAAAATTACGAAAATTTAGCAGGAATACGCGCCAT
TCCTCGTGAATATAAGTTAA

Product: phosphoesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRILFVGDVVGSPGRGMIQQYVPALKKKYTPTVTIINGENAAGGRGITEKIYRNFLECGAQAVTLGNHAWDNREVFEFID
DAKYLARPANFPEGTPGKGLIFVNCNGTEVAVINLQGRTFLPPIDCPFRKVDELINIAKKRTNIIFVDFHAETTSEKQAL
GWYVDGRATAVVGTHTHVPTADNRILPSGTAYITDVGMTGPYDGILGMDREAVLKKFLTNLPVRFEVTNGRTQLSAVLID
VDPNTGKAKKIERILINDDQPFFE

Sequences:

>Translated_264_residues
MRILFVGDVVGSPGRGMIQQYVPALKKKYTPTVTIINGENAAGGRGITEKIYRNFLECGAQAVTLGNHAWDNREVFEFID
DAKYLARPANFPEGTPGKGLIFVNCNGTEVAVINLQGRTFLPPIDCPFRKVDELINIAKKRTNIIFVDFHAETTSEKQAL
GWYVDGRATAVVGTHTHVPTADNRILPSGTAYITDVGMTGPYDGILGMDREAVLKKFLTNLPVRFEVTNGRTQLSAVLID
VDPNTGKAKKIERILINDDQPFFE
>Mature_264_residues
MRILFVGDVVGSPGRGMIQQYVPALKKKYTPTVTIINGENAAGGRGITEKIYRNFLECGAQAVTLGNHAWDNREVFEFID
DAKYLARPANFPEGTPGKGLIFVNCNGTEVAVINLQGRTFLPPIDCPFRKVDELINIAKKRTNIIFVDFHAETTSEKQAL
GWYVDGRATAVVGTHTHVPTADNRILPSGTAYITDVGMTGPYDGILGMDREAVLKKFLTNLPVRFEVTNGRTQLSAVLID
VDPNTGKAKKIERILINDDQPFFE

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29085; Mature: 29085

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFVGDVVGSPGRGMIQQYVPALKKKYTPTVTIINGENAAGGRGITEKIYRNFLECGA
CEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC
QAVTLGNHAWDNREVFEFIDDAKYLARPANFPEGTPGKGLIFVNCNGTEVAVINLQGRTF
EEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCEE
LPPIDCPFRKVDELINIAKKRTNIIFVDFHAETTSEKQALGWYVDGRATAVVGTHTHVPT
CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHEEEEECCEEEEEEECCCCCCC
ADNRILPSGTAYITDVGMTGPYDGILGMDREAVLKKFLTNLPVRFEVTNGRTQLSAVLID
CCCEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEEEE
VDPNTGKAKKIERILINDDQPFFE
ECCCCCCHHHEEEEEECCCCCCCC
>Mature Secondary Structure
MRILFVGDVVGSPGRGMIQQYVPALKKKYTPTVTIINGENAAGGRGITEKIYRNFLECGA
CEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC
QAVTLGNHAWDNREVFEFIDDAKYLARPANFPEGTPGKGLIFVNCNGTEVAVINLQGRTF
EEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCEE
LPPIDCPFRKVDELINIAKKRTNIIFVDFHAETTSEKQALGWYVDGRATAVVGTHTHVPT
CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHEEEEECCEEEEEEECCCCCCC
ADNRILPSGTAYITDVGMTGPYDGILGMDREAVLKKFLTNLPVRFEVTNGRTQLSAVLID
CCCEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEEEE
VDPNTGKAKKIERILINDDQPFFE
ECCCCCCHHHEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]