Click here to switch to the map view.

The map label for this gene is 218232808

Identifier: 218232808

GI number: 218232808

Start: 2514131

End: 2514481

Strand: Reverse

Name: 218232808

Synonym: BCB4264_A2593

Alternate gene names: NA

Gene position: 2514481-2514131 (Counterclockwise)

Preceding gene: 218234940

Following gene: 218236017

Centisome position: 46.4

GC content: 32.19

Gene sequence:

>351_bases
ATGGAAATGAAGGATAGAATTAAACAAATTCGAATAGATAACAAAATGAATCAAGAACAATTCGGAAAAGAAGTGGATTT
AACTAAAGGGACTGTTTCAAAGTTTGAAAATGGAAAAGCATTCCCAAGTCGTGAAACCATAGAAAAGATAGCGAAGAGAT
TTAATGTACCTGTAAATTATTTGTACGGAGAAAATAAAGATGACGACTCTAGTGATGATAAATATAAAAAATTCAAAGAA
ATCATGGAATGGCTAGAACCGCTGCCAAAGGATAAAGAAGATATGGCGTTAGAACAAATGTTAGCTATCGCTCAAGCTCT
TAGCAAACACCATAATAAAACAGAAAAATAG

Upstream 100 bases:

>100_bases
AGAGAAGGAAACTTTTTTACTCTTTACGTTTCTTGCTAGGAAACTTTATAATGTAATTAACGTAATTTACGATATATCGT
AAAAAGGGGAGTATTTAAAT

Downstream 100 bases:

>100_bases
CCCCTTAATTAGGAATGGCTATTTTTTTAATTTCTGCTATATATTCTTCTAATTGATCTGGTGCATATTCTTTCACAGTA
TCTAAAAATAGGATTACAAT

Product: transcriptional regulator

Products: NA

Alternate protein names: Phage-Related Transcritpional Regulator

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MEMKDRIKQIRIDNKMNQEQFGKEVDLTKGTVSKFENGKAFPSRETIEKIAKRFNVPVNYLYGENKDDDSSDDKYKKFKE
IMEWLEPLPKDKEDMALEQMLAIAQALSKHHNKTEK

Sequences:

>Translated_116_residues
MEMKDRIKQIRIDNKMNQEQFGKEVDLTKGTVSKFENGKAFPSRETIEKIAKRFNVPVNYLYGENKDDDSSDDKYKKFKE
IMEWLEPLPKDKEDMALEQMLAIAQALSKHHNKTEK
>Mature_116_residues
MEMKDRIKQIRIDNKMNQEQFGKEVDLTKGTVSKFENGKAFPSRETIEKIAKRFNVPVNYLYGENKDDDSSDDKYKKFKE
IMEWLEPLPKDKEDMALEQMLAIAQALSKHHNKTEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13684; Mature: 13684

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMKDRIKQIRIDNKMNQEQFGKEVDLTKGTVSKFENGKAFPSRETIEKIAKRFNVPVNY
CCHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
LYGENKDDDSSDDKYKKFKEIMEWLEPLPKDKEDMALEQMLAIAQALSKHHNKTEK
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEMKDRIKQIRIDNKMNQEQFGKEVDLTKGTVSKFENGKAFPSRETIEKIAKRFNVPVNY
CCHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
LYGENKDDDSSDDKYKKFKEIMEWLEPLPKDKEDMALEQMLAIAQALSKHHNKTEK
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA