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The map label for this gene is intQ [C]

Identifier: 218236017

GI number: 218236017

Start: 2510616

End: 2511725

Strand: Reverse

Name: intQ [C]

Synonym: BCB4264_A2589

Alternate gene names: 218236017

Gene position: 2511725-2510616 (Counterclockwise)

Preceding gene: 218232808

Following gene: 218234151

Centisome position: 46.35

GC content: 32.79

Gene sequence:

>1110_bases
GTGAAAGGACATATTCGAAAAAGAGGAAATAAGTATTGTATTGTTATTGACATCGGACCTGATCCAGAGACAGGAAAAAG
AAGACAGAAGTGGTTTTCTGGGTATAAGACAAAAAAAGAAGCACAGGCTGATGTTGCAAAGAAAATTACAGAGTTGAATG
AAGGAACTTTTATAGAGCCATCTAAAGTTACACTAAAAGATTACCTAAATCATTGGCTAGAAATTAAAAGTATGAGCATA
GAAAAGAGTACCTTTGCTGGCTATAGGGCATTTATCAACCAACATGTTATACCTAGTATAGGAATGGTCGCGCTCCATAA
ATTAAATGTTATGCACATTCAAAAATGCTATAAGAATGCGATAGATAAAGGGATTGCAAACAATTCTATTCTGCTTATGC
ATAGAATTTTAAAGAGCGCTTTAAACCTAGCCGTAAAACAAAATATTATCTCTCGAAATCCAGCAGATTTTGCTGAGATA
CCTAAAAAAGAAAAAACCCCTATCCAGACTTGGACAGAGGAAGAAGTAAAAAAGTTTTTAGCTCATTCACAAGAATCACG
ATATCACATTGGATATCTACTTGCAATAACTACAGGTATGCGTTTGGGAGAAGTTCTAGGTTTACGATGGCAGGACATTG
ATTTTGAAAAACATACAGTTACAATAAATCAAACATCTGGTCATGACAATAAAATCAAAAAAACTGCAAAAACAAATTCA
TCAAAACGCACAATTCCTGTACCTAATGAAACAATAGCCGCCTTAAAAAAACATAAGGTTTTAATTAATAAAGAGAAATT
AAGGTTTGGTTCTGCTTATCTAGATCAAGATTTAATAAATTGTAATGAGTTTGGAAGAATCATAAAAAGAGCACATTTCA
GAAAAAGTTTCATTAGGATGACACACAAAGTAGGTATAAAAGAAATTAAATTTCATGATTTAAGACATACACACGCAACT
CTACTATTGAAACAAGGAGTTAACCCTAAAATCATCAGTGAGCGATTGGGTCATACAGATATTTCAATGACATTAAGTGT
CTATTCTCATGTTTTACCGAATATGCAGGAAGAAGCAGTTAAAAACTTCGGTAAAAGTATCTTTGGATAA

Upstream 100 bases:

>100_bases
ATATCCATCGCTGATATGTCCAAACATGTAATTTTCATAGCAGCAAAATTACAACTAGACTTATACAACATGATTCAAAA
CAAATGAAGGAGTGTTTTAA

Downstream 100 bases:

>100_bases
CCTATGTTTGCAAAATGTTTGCATTTTATCAAAAAAAGTCAAACAAACGTTGTCATATCAAGGTTTGTTTGACCTATCAT
CTTATATTCTTGATAAAATC

Product: DNA integration/recombination/invertion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MKGHIRKRGNKYCIVIDIGPDPETGKRRQKWFSGYKTKKEAQADVAKKITELNEGTFIEPSKVTLKDYLNHWLEIKSMSI
EKSTFAGYRAFINQHVIPSIGMVALHKLNVMHIQKCYKNAIDKGIANNSILLMHRILKSALNLAVKQNIISRNPADFAEI
PKKEKTPIQTWTEEEVKKFLAHSQESRYHIGYLLAITTGMRLGEVLGLRWQDIDFEKHTVTINQTSGHDNKIKKTAKTNS
SKRTIPVPNETIAALKKHKVLINKEKLRFGSAYLDQDLINCNEFGRIIKRAHFRKSFIRMTHKVGIKEIKFHDLRHTHAT
LLLKQGVNPKIISERLGHTDISMTLSVYSHVLPNMQEEAVKNFGKSIFG

Sequences:

>Translated_369_residues
MKGHIRKRGNKYCIVIDIGPDPETGKRRQKWFSGYKTKKEAQADVAKKITELNEGTFIEPSKVTLKDYLNHWLEIKSMSI
EKSTFAGYRAFINQHVIPSIGMVALHKLNVMHIQKCYKNAIDKGIANNSILLMHRILKSALNLAVKQNIISRNPADFAEI
PKKEKTPIQTWTEEEVKKFLAHSQESRYHIGYLLAITTGMRLGEVLGLRWQDIDFEKHTVTINQTSGHDNKIKKTAKTNS
SKRTIPVPNETIAALKKHKVLINKEKLRFGSAYLDQDLINCNEFGRIIKRAHFRKSFIRMTHKVGIKEIKFHDLRHTHAT
LLLKQGVNPKIISERLGHTDISMTLSVYSHVLPNMQEEAVKNFGKSIFG
>Mature_369_residues
MKGHIRKRGNKYCIVIDIGPDPETGKRRQKWFSGYKTKKEAQADVAKKITELNEGTFIEPSKVTLKDYLNHWLEIKSMSI
EKSTFAGYRAFINQHVIPSIGMVALHKLNVMHIQKCYKNAIDKGIANNSILLMHRILKSALNLAVKQNIISRNPADFAEI
PKKEKTPIQTWTEEEVKKFLAHSQESRYHIGYLLAITTGMRLGEVLGLRWQDIDFEKHTVTINQTSGHDNKIKKTAKTNS
SKRTIPVPNETIAALKKHKVLINKEKLRFGSAYLDQDLINCNEFGRIIKRAHFRKSFIRMTHKVGIKEIKFHDLRHTHAT
LLLKQGVNPKIISERLGHTDISMTLSVYSHVLPNMQEEAVKNFGKSIFG

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 42281; Mature: 42281

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGHIRKRGNKYCIVIDIGPDPETGKRRQKWFSGYKTKKEAQADVAKKITELNEGTFIEP
CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
SKVTLKDYLNHWLEIKSMSIEKSTFAGYRAFINQHVIPSIGMVALHKLNVMHIQKCYKNA
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IDKGIANNSILLMHRILKSALNLAVKQNIISRNPADFAEIPKKEKTPIQTWTEEEVKKFL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHH
AHSQESRYHIGYLLAITTGMRLGEVLGLRWQDIDFEKHTVTINQTSGHDNKIKKTAKTNS
HCCCCCCCHHEEHHHHHHCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCC
SKRTIPVPNETIAALKKHKVLINKEKLRFGSAYLDQDLINCNEFGRIIKRAHFRKSFIRM
CCCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
THKVGIKEIKFHDLRHTHATLLLKQGVNPKIISERLGHTDISMTLSVYSHVLPNMQEEAV
HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
KNFGKSIFG
HHHHHHHCC
>Mature Secondary Structure
MKGHIRKRGNKYCIVIDIGPDPETGKRRQKWFSGYKTKKEAQADVAKKITELNEGTFIEP
CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
SKVTLKDYLNHWLEIKSMSIEKSTFAGYRAFINQHVIPSIGMVALHKLNVMHIQKCYKNA
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IDKGIANNSILLMHRILKSALNLAVKQNIISRNPADFAEIPKKEKTPIQTWTEEEVKKFL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHH
AHSQESRYHIGYLLAITTGMRLGEVLGLRWQDIDFEKHTVTINQTSGHDNKIKKTAKTNS
HCCCCCCCHHEEHHHHHHCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCC
SKRTIPVPNETIAALKKHKVLINKEKLRFGSAYLDQDLINCNEFGRIIKRAHFRKSFIRM
CCCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
THKVGIKEIKFHDLRHTHATLLLKQGVNPKIISERLGHTDISMTLSVYSHVLPNMQEEAV
HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
KNFGKSIFG
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]