| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213693312
Identifier: 213693312
GI number: 213693312
Start: 2785427
End: 2787043
Strand: Direct
Name: 213693312
Synonym: Blon_2466
Alternate gene names: NA
Gene position: 2785427-2787043 (Clockwise)
Preceding gene: 213693311
Following gene: 213693313
Centisome position: 98.33
GC content: 61.04
Gene sequence:
>1617_bases ATGACCAACAGCGATGGTGGGTTCCAGTTCGACTTCCAGCAGCACGAAAAGCCGGTCAGGCCAACGGTTCCTCCGATTCC CGGGCAAGAGACGGCAGCATATAGCACGGAACCCACGGCACAGGCCACACCGGCTCTGCAGTTCCCGCAGTCTGTGCAGT CTGTGCAGTCTGTGCAGCCGACGCAGTTTGCACAGCCCACACAGCCCGCACAGCCGACGCAGCCCATCGATCAGGCCATG ACGCAACCGTTCTCGCCGCAATTCCCGGCTGCGGTTGCCGCACAAGCACCACAGCCGGCGGCAGCCACACAGCCAGCAGT ATCCGAAACACCAATCGCCGCTGCGCCCGGCCAGCAGCAATACGTTTGGGATCAGGCGACGCAAAGCTTCCGCCCGGTGG AACCGACAGCGCCGGTGACACCAGCAGCACCAGCGGCACCGGCGACATCGCCTGTTTCGGCAGCTTCAAACGCCGCGACA CAAGCGTTCCAGCCCAATCAGGCCGAGCAGCCTGCGGTAGATGCCGAGGCAACACAGGTGTTCCAACCTGATTCAGCTGC GGCCACACAGGCATATGGCGCATCATCCACCGTATCCGGTGAGACCGTTGCCATGCCTGCAACGCAAGTAGCGTCTGCCG ATGATGCCGCAGCCACACAGGTGTTCCAACCGGCCGCCCTGGCCGCTTCGGCACAGGCTCAGCCTGCTGTGATGCCTCCC TCCATTCCGTTGGCTCAGGTCTCCGATGAGGACGATTCCGATGGCGCCGAGCCTCGTCACGGCGGTAGCGGCAAAAAGAA CACCCTCAAAATCGTCGGCATTGCCGTAGCGGTAGTCGCCGTGATAGCGCTGGTTGTCGCCGGCCTGCTCTGGTGGCATT CCAACAGCAGTAAGGCGAGCCAAGCCGTGGCATTGGCCGAGTGCAAGGTAGCGGCCAAGCAGTACACGAATGCGCAGAAG AAGCTCACCACCGCCATATCCAATGGCCAAACCAGCGCGCAAACATCCACCAGCGATGTGGCCGATGCCAATACGCTCAC CACGCTGAATCAGGCGTTGCAAGACGCCGGCAACCCGGCTGACACCGCCAAGTGCGATTCCAGCCTCAACGCCACTGAGT TGAAGTCTCACATTAAAGAGCTGCAGAATGATGCCAGCGACATGGCTGACAAGACGGATGCCATCAACAATGCGATCAAG GCCGTTAACACTTCAAAGGCGACGGCCGATACCGACACACTGAAATCGAACCTGAGCTCGGCTATTTCGCAGGCGCAAGG CACGCTAGATAATTCCGCGGGCAGTGTGGCCGATGAAAACACCCGCACCGCGCTGCAAAACACCATCACCGAGGCCAATA CGGTGATGAACGGGACCAGTCCGTCCGAATCCGACGTCAACAATGCGATTTCTAAACTGCAGAAGGCCGAGTCCGACGTC ACCGCCTCGATGCAGGCCAAGCAGCAGGCAGATGCCGCCAAGCAGGCCCAGGAGAAGGCCAAGCAGCAAGCCCGGCAGGA GGCGCAACAACAGGCCCAGAAGAAGCCCGGCGACAACGGGACCGACAACGACAACGGCAACGGGACCGACACCAACTCCC AACACACCGGCAACTAA
Upstream 100 bases:
>100_bases CCTACGAGAATTTCTACCGCGCGCACATCGACGACTGAGCGTTGCGACGTACCATTCGGCCGGCGGATGCCGGCCATTTG CTTAATCCCAAGGAGATGTC
Downstream 100 bases:
>100_bases AATCCACGCACGCCCCACATACGGCACCGCCCATGGAGGCGGAATGGCCCGAAGCGCCGCTCTGATAGGCGACTATAGGA AACGGCGATAACCACAGGGC
Product: sugar-binding domain protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MTNSDGGFQFDFQQHEKPVRPTVPPIPGQETAAYSTEPTAQATPALQFPQSVQSVQSVQPTQFAQPTQPAQPTQPIDQAM TQPFSPQFPAAVAAQAPQPAAATQPAVSETPIAAAPGQQQYVWDQATQSFRPVEPTAPVTPAAPAAPATSPVSAASNAAT QAFQPNQAEQPAVDAEATQVFQPDSAAATQAYGASSTVSGETVAMPATQVASADDAAATQVFQPAALAASAQAQPAVMPP SIPLAQVSDEDDSDGAEPRHGGSGKKNTLKIVGIAVAVVAVIALVVAGLLWWHSNSSKASQAVALAECKVAAKQYTNAQK KLTTAISNGQTSAQTSTSDVADANTLTTLNQALQDAGNPADTAKCDSSLNATELKSHIKELQNDASDMADKTDAINNAIK AVNTSKATADTDTLKSNLSSAISQAQGTLDNSAGSVADENTRTALQNTITEANTVMNGTSPSESDVNNAISKLQKAESDV TASMQAKQQADAAKQAQEKAKQQARQEAQQQAQKKPGDNGTDNDNGNGTDTNSQHTGN
Sequences:
>Translated_538_residues MTNSDGGFQFDFQQHEKPVRPTVPPIPGQETAAYSTEPTAQATPALQFPQSVQSVQSVQPTQFAQPTQPAQPTQPIDQAM TQPFSPQFPAAVAAQAPQPAAATQPAVSETPIAAAPGQQQYVWDQATQSFRPVEPTAPVTPAAPAAPATSPVSAASNAAT QAFQPNQAEQPAVDAEATQVFQPDSAAATQAYGASSTVSGETVAMPATQVASADDAAATQVFQPAALAASAQAQPAVMPP SIPLAQVSDEDDSDGAEPRHGGSGKKNTLKIVGIAVAVVAVIALVVAGLLWWHSNSSKASQAVALAECKVAAKQYTNAQK KLTTAISNGQTSAQTSTSDVADANTLTTLNQALQDAGNPADTAKCDSSLNATELKSHIKELQNDASDMADKTDAINNAIK AVNTSKATADTDTLKSNLSSAISQAQGTLDNSAGSVADENTRTALQNTITEANTVMNGTSPSESDVNNAISKLQKAESDV TASMQAKQQADAAKQAQEKAKQQARQEAQQQAQKKPGDNGTDNDNGNGTDTNSQHTGN >Mature_537_residues TNSDGGFQFDFQQHEKPVRPTVPPIPGQETAAYSTEPTAQATPALQFPQSVQSVQSVQPTQFAQPTQPAQPTQPIDQAMT QPFSPQFPAAVAAQAPQPAAATQPAVSETPIAAAPGQQQYVWDQATQSFRPVEPTAPVTPAAPAAPATSPVSAASNAATQ AFQPNQAEQPAVDAEATQVFQPDSAAATQAYGASSTVSGETVAMPATQVASADDAAATQVFQPAALAASAQAQPAVMPPS IPLAQVSDEDDSDGAEPRHGGSGKKNTLKIVGIAVAVVAVIALVVAGLLWWHSNSSKASQAVALAECKVAAKQYTNAQKK LTTAISNGQTSAQTSTSDVADANTLTTLNQALQDAGNPADTAKCDSSLNATELKSHIKELQNDASDMADKTDAINNAIKA VNTSKATADTDTLKSNLSSAISQAQGTLDNSAGSVADENTRTALQNTITEANTVMNGTSPSESDVNNAISKLQKAESDVT ASMQAKQQADAAKQAQEKAKQQARQEAQQQAQKKPGDNGTDNDNGNGTDTNSQHTGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55287; Mature: 55156
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSDGGFQFDFQQHEKPVRPTVPPIPGQETAAYSTEPTAQATPALQFPQSVQSVQSVQP CCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHCCC TQFAQPTQPAQPTQPIDQAMTQPFSPQFPAAVAAQAPQPAAATQPAVSETPIAAAPGQQQ HHCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH YVWDQATQSFRPVEPTAPVTPAAPAAPATSPVSAASNAATQAFQPNQAEQPAVDAEATQV HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH FQPDSAAATQAYGASSTVSGETVAMPATQVASADDAAATQVFQPAALAASAQAQPAVMPP CCCCCHHHHHHCCCCCCCCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC SIPLAQVSDEDDSDGAEPRHGGSGKKNTLKIVGIAVAVVAVIALVVAGLLWWHSNSSKAS CCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH QAVALAECKVAAKQYTNAQKKLTTAISNGQTSAQTSTSDVADANTLTTLNQALQDAGNPA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCC DTAKCDSSLNATELKSHIKELQNDASDMADKTDAINNAIKAVNTSKATADTDTLKSNLSS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AISQAQGTLDNSAGSVADENTRTALQNTITEANTVMNGTSPSESDVNNAISKLQKAESDV HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TASMQAKQQADAAKQAQEKAKQQARQEAQQQAQKKPGDNGTDNDNGNGTDTNSQHTGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TNSDGGFQFDFQQHEKPVRPTVPPIPGQETAAYSTEPTAQATPALQFPQSVQSVQSVQP CCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHCCC TQFAQPTQPAQPTQPIDQAMTQPFSPQFPAAVAAQAPQPAAATQPAVSETPIAAAPGQQQ HHCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH YVWDQATQSFRPVEPTAPVTPAAPAAPATSPVSAASNAATQAFQPNQAEQPAVDAEATQV HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH FQPDSAAATQAYGASSTVSGETVAMPATQVASADDAAATQVFQPAALAASAQAQPAVMPP CCCCCHHHHHHCCCCCCCCCCEEECCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC SIPLAQVSDEDDSDGAEPRHGGSGKKNTLKIVGIAVAVVAVIALVVAGLLWWHSNSSKAS CCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH QAVALAECKVAAKQYTNAQKKLTTAISNGQTSAQTSTSDVADANTLTTLNQALQDAGNPA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCC DTAKCDSSLNATELKSHIKELQNDASDMADKTDAINNAIKAVNTSKATADTDTLKSNLSS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AISQAQGTLDNSAGSVADENTRTALQNTITEANTVMNGTSPSESDVNNAISKLQKAESDV HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH TASMQAKQQADAAKQAQEKAKQQARQEAQQQAQKKPGDNGTDNDNGNGTDTNSQHTGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA