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The map label for this gene is dcd [H]

Identifier: 213693311

GI number: 213693311

Start: 2784783

End: 2785364

Strand: Direct

Name: dcd [H]

Synonym: Blon_2465

Alternate gene names: 213693311

Gene position: 2784783-2785364 (Clockwise)

Preceding gene: 213693308

Following gene: 213693312

Centisome position: 98.31

GC content: 58.42

Gene sequence:

>582_bases
ATGCTGCTGTCCGACCGCGACATTCTCGCCGCACAGTCCGCAGGTCATATCTCACTTGATCCGTGGACCCCCGAAATGGT
GCAGCCCGCTTCCATCGACGTGCGATTGGATCGGTACTTCCGTTTGTTCAATAACCACGCCTACACATATGTCGATCCGG
CGGAAAACCAAGGCGCACTTACCGAACAGTTCGAGGTGGCTCCCGACGAACCGTGGATTTTGCACCCCGGCGAGTTCGCA
CTGGGTTCCACGTGGGAATACGTCAAGTTGGACCCGTCCATTGCCGCCCGCTTGGAAGGCAAGAGCTCACTGGGTCGATT
GGGTATTCTGACCCATTCGACTGCGGGCTTCATTGACCCCGGTTTCGAGGGGCATATTACGCTTGAGCTGTCTAATGTGT
CGACGCTGCCGGTCAAACTATGGCCTGGCATGAAGATCGGCCAGATGTGCTTCTTCCAGCTGAGCTCGCCCGCTGAGCAC
CCTTATGGCTCCAAGGGCACCGGCTCGCATTATCAGGGCCAGCGGGGTCCGACGCCGAGCCGTTCCTACGAGAATTTCTA
CCGCGCGCACATCGACGACTGA

Upstream 100 bases:

>100_bases
TTGCGATTGATGGACCGCGGAAGCGTGAGGAGCCTCTCATGTTTCCGCCCAAGGCGCTAGACTTGAAGGCAGTATTTATT
TGCCCAAGGAGTTTTTTCAC

Downstream 100 bases:

>100_bases
GCGTTGCGACGTACCATTCGGCCGGCGGATGCCGGCCATTTGCTTAATCCCAAGGAGATGTCATGACCAACAGCGATGGT
GGGTTCCAGTTCGACTTCCA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLLSDRDILAAQSAGHISLDPWTPEMVQPASIDVRLDRYFRLFNNHAYTYVDPAENQGALTEQFEVAPDEPWILHPGEFA
LGSTWEYVKLDPSIAARLEGKSSLGRLGILTHSTAGFIDPGFEGHITLELSNVSTLPVKLWPGMKIGQMCFFQLSSPAEH
PYGSKGTGSHYQGQRGPTPSRSYENFYRAHIDD

Sequences:

>Translated_193_residues
MLLSDRDILAAQSAGHISLDPWTPEMVQPASIDVRLDRYFRLFNNHAYTYVDPAENQGALTEQFEVAPDEPWILHPGEFA
LGSTWEYVKLDPSIAARLEGKSSLGRLGILTHSTAGFIDPGFEGHITLELSNVSTLPVKLWPGMKIGQMCFFQLSSPAEH
PYGSKGTGSHYQGQRGPTPSRSYENFYRAHIDD
>Mature_193_residues
MLLSDRDILAAQSAGHISLDPWTPEMVQPASIDVRLDRYFRLFNNHAYTYVDPAENQGALTEQFEVAPDEPWILHPGEFA
LGSTWEYVKLDPSIAARLEGKSSLGRLGILTHSTAGFIDPGFEGHITLELSNVSTLPVKLWPGMKIGQMCFFQLSSPAEH
PYGSKGTGSHYQGQRGPTPSRSYENFYRAHIDD

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=190, Percent_Identity=40, Blast_Score=128, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21464; Mature: 21464

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSDRDILAAQSAGHISLDPWTPEMVQPASIDVRLDRYFRLFNNHAYTYVDPAENQGAL
CCCCCCCEEEECCCCCEEECCCCHHHCCCCEEEEEHHHHHHHHCCCCEEEECCCCCCCCC
TEQFEVAPDEPWILHPGEFALGSTWEYVKLDPSIAARLEGKSSLGRLGILTHSTAGFIDP
CEEEECCCCCCEEECCCCCCCCCCEEEEEECCHHEEEECCCCCCCEEEEEEECCCCCCCC
GFEGHITLELSNVSTLPVKLWPGMKIGQMCFFQLSSPAEHPYGSKGTGSHYQGQRGPTPS
CCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RSYENFYRAHIDD
CCHHHHEEEECCC
>Mature Secondary Structure
MLLSDRDILAAQSAGHISLDPWTPEMVQPASIDVRLDRYFRLFNNHAYTYVDPAENQGAL
CCCCCCCEEEECCCCCEEECCCCHHHCCCCEEEEEHHHHHHHHCCCCEEEECCCCCCCCC
TEQFEVAPDEPWILHPGEFALGSTWEYVKLDPSIAARLEGKSSLGRLGILTHSTAGFIDP
CEEEECCCCCCEEECCCCCCCCCCEEEEEECCHHEEEECCCCCCCEEEEEEECCCCCCCC
GFEGHITLELSNVSTLPVKLWPGMKIGQMCFFQLSSPAEHPYGSKGTGSHYQGQRGPTPS
CCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RSYENFYRAHIDD
CCHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA