| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is nhaK [H]
Identifier: 213693308
GI number: 213693308
Start: 2780538
End: 2782607
Strand: Direct
Name: nhaK [H]
Synonym: Blon_2462
Alternate gene names: 213693308
Gene position: 2780538-2782607 (Clockwise)
Preceding gene: 213693305
Following gene: 213693311
Centisome position: 98.16
GC content: 59.32
Gene sequence:
>2070_bases ATGGCGGTATTTGAGCTCATCCTATGCATCATTGCGGCGGTGGTGGTGAGCTCGTTTGCCAGTCGCTTCGTGCCCAAAGT CTCCACGCCGCTGGTCCAGATTGTGCTGGGCGTGCTGGTTACGTATCTGCCGTTTTTCCCGGATGCAAAGCTCGACCCGG AACTGTTCATGGTGCTGTTTATCGCGCCATTGCTGTATTTGGAAGCCCACGAAATCGATAAGTCGGCGTTGCTGAAAACG CTGGATCTGAGCCTATCGCTGGCTATCGGACTGGCTATCGTCACGATGGCGGCGGTCGGATTCACTTTGCATGCCGTCTG GCCGTCCATCACCTTAGCCTCAGCCTTAGCACTCGGCGCGGCACTCGGCCCGACCGATGCGGTGGCCGTCAGCTCCCTCG GTAAAGAAGCCTCGCTGACGCAGCGTCAGCGCAGCGTGCTCAAAGGCGAGTCGTTGTTCAACGACGCCTCCGGCATTGTC GGCTTCCAGTTCGCACTGGCCGCCGCCTTCACCGGAGAATTCGCCGTGGGGCAGGCCGCCGGCGAATTCCTGATGTCCTT CTTCGGCGGCACCCTGTTCGGCCTGGTCATAGCGGCGGCCAACTGGCTGTTCGAAACCGTGCGGTCCCTGGGCTGGGAGA CCACCACCACACGCATTCTGATGGAGCTGTTCCTGCCCTTCCTGCTGTATCTGGGCGCGGAGGAATTCAATGTGTCCGGC ATTCTGTCGGTGGTGGCCGCTGGCCTGTTCATCCGATTCGACCGTACCGGCGTGGGGCCGAATGTGGCACGTACGAATAT CGTTTCCACTTCAGTATGGGGTGTGCTGAGTTTCTCGCTCAACGGTGCGGTGTTCATTCTTCTGGGCATGCAGCTGCCAC GCGCCATGAAAGCCAGCTGGTCCGACCCGTATATCAGCAACCTGAAACTCATCGGCATCATCCTGCTGGTGACGCTTGTG GTGATCGCACTGCGGTTCTTCTGGATAGTGGCCATGCTGCGCGTGGCGCGCGACGTGCATACACGGCGACGGCGCAAGAT GACCCCCGAACGTTGGCGGTCCGCGACGGTCATGACCTTCGGCGGACCCAAAGGCACCATCACCCTGTCGCTGATGTTCA CCATCCCGTATTATCTCGCCGGGGGCGCGCCGTTCCCCATGCGCAACGAGTTGATCTTCATCGCATCGGGCGTCATCGTC GTGACGCTGATGCTGGCCAATTTCCTGCTGCCTTTGCTTGCACCGAACCGTGGCAAGGATCCCAGCGCCGAGATGATTCC GGTGACCATCGATGTGTTACGCGCCACGGTGGAGGAACTGACCGGACGCATCACGCCAGAGAATCGCCGTGCGATTCTGA TGGTAATCGACCAGTACACCAAGCGCATCGGGCGATTGCAGCAGCGCATCGGCGATACCGATCCTCAGGGATTCGAGCAA TTGCAGATCGAAGCGCTGCATTGGGAAAAGGAATTCGTGCGCGACCGGCTTGCCGACACCAAGGCGCATCCAGCGGCGGA TACGGCCACGCAAGAGCTGAACGTCGAAGCCTGCGAGCGCATGCTTGACCAGATTATGAATACGCTGCGTCACACTTCCA CTGATCCTACTTCGGGGCATGCGGTATCGCAGATTCGCGGTCGCTTACGCATGTTCCAGCGGCAGATGAGCAACTACGCC AAACGCACGGTGTCCAAGATTCGCCATACCACGCCGTTGGTGAGCGAGGATCGGATTTTCGCGCGCACCCGCGAACTGCA GGTCGAGGCGATTCATCATGTTATCGGCCAGCTTATTGACGAGATGGGCCAGGATACGTACAACACCGAGCATTGTTCGG CGCTGTTGCTGGATTATCGTCGCGCTGCGGCTTCATTGCAGGCACGTCCGAATATGAGCGGCACTACGGAAACCATCACG CAGGTCGAGGACGTAAAGCGCGAGAGCTACGGCATCGAACTCGGTGTGATTCAGGACATGTACGAAGCCGGCGACATCAA CCGAACCCAAGCCCGCTCCCTGAGGCGCAACATCTACGTTATGCAGGTCGATGCTGATTCCGGCATCTAG
Upstream 100 bases:
>100_bases CATATCGTCTCATGATGTGCATAATCGGCCGCAATCTTAACGTTTTTCTTCATGGTTCCCATATACTTTTGGTGGAGAAG AGATACGAGAAGGCGGCAAC
Downstream 100 bases:
>100_bases TTTCCTTGGCTCCCTTCTCTGAGGGGAGCCAAGTTGGGGATTGCTATTTCCGTTTCCAGTGATGGCGGCTGACTACAGCA CGCCAGAAGTAATGTCGTTG
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MAVFELILCIIAAVVVSSFASRFVPKVSTPLVQIVLGVLVTYLPFFPDAKLDPELFMVLFIAPLLYLEAHEIDKSALLKT LDLSLSLAIGLAIVTMAAVGFTLHAVWPSITLASALALGAALGPTDAVAVSSLGKEASLTQRQRSVLKGESLFNDASGIV GFQFALAAAFTGEFAVGQAAGEFLMSFFGGTLFGLVIAAANWLFETVRSLGWETTTTRILMELFLPFLLYLGAEEFNVSG ILSVVAAGLFIRFDRTGVGPNVARTNIVSTSVWGVLSFSLNGAVFILLGMQLPRAMKASWSDPYISNLKLIGIILLVTLV VIALRFFWIVAMLRVARDVHTRRRRKMTPERWRSATVMTFGGPKGTITLSLMFTIPYYLAGGAPFPMRNELIFIASGVIV VTLMLANFLLPLLAPNRGKDPSAEMIPVTIDVLRATVEELTGRITPENRRAILMVIDQYTKRIGRLQQRIGDTDPQGFEQ LQIEALHWEKEFVRDRLADTKAHPAADTATQELNVEACERMLDQIMNTLRHTSTDPTSGHAVSQIRGRLRMFQRQMSNYA KRTVSKIRHTTPLVSEDRIFARTRELQVEAIHHVIGQLIDEMGQDTYNTEHCSALLLDYRRAAASLQARPNMSGTTETIT QVEDVKRESYGIELGVIQDMYEAGDINRTQARSLRRNIYVMQVDADSGI
Sequences:
>Translated_689_residues MAVFELILCIIAAVVVSSFASRFVPKVSTPLVQIVLGVLVTYLPFFPDAKLDPELFMVLFIAPLLYLEAHEIDKSALLKT LDLSLSLAIGLAIVTMAAVGFTLHAVWPSITLASALALGAALGPTDAVAVSSLGKEASLTQRQRSVLKGESLFNDASGIV GFQFALAAAFTGEFAVGQAAGEFLMSFFGGTLFGLVIAAANWLFETVRSLGWETTTTRILMELFLPFLLYLGAEEFNVSG ILSVVAAGLFIRFDRTGVGPNVARTNIVSTSVWGVLSFSLNGAVFILLGMQLPRAMKASWSDPYISNLKLIGIILLVTLV VIALRFFWIVAMLRVARDVHTRRRRKMTPERWRSATVMTFGGPKGTITLSLMFTIPYYLAGGAPFPMRNELIFIASGVIV VTLMLANFLLPLLAPNRGKDPSAEMIPVTIDVLRATVEELTGRITPENRRAILMVIDQYTKRIGRLQQRIGDTDPQGFEQ LQIEALHWEKEFVRDRLADTKAHPAADTATQELNVEACERMLDQIMNTLRHTSTDPTSGHAVSQIRGRLRMFQRQMSNYA KRTVSKIRHTTPLVSEDRIFARTRELQVEAIHHVIGQLIDEMGQDTYNTEHCSALLLDYRRAAASLQARPNMSGTTETIT QVEDVKRESYGIELGVIQDMYEAGDINRTQARSLRRNIYVMQVDADSGI >Mature_688_residues AVFELILCIIAAVVVSSFASRFVPKVSTPLVQIVLGVLVTYLPFFPDAKLDPELFMVLFIAPLLYLEAHEIDKSALLKTL DLSLSLAIGLAIVTMAAVGFTLHAVWPSITLASALALGAALGPTDAVAVSSLGKEASLTQRQRSVLKGESLFNDASGIVG FQFALAAAFTGEFAVGQAAGEFLMSFFGGTLFGLVIAAANWLFETVRSLGWETTTTRILMELFLPFLLYLGAEEFNVSGI LSVVAAGLFIRFDRTGVGPNVARTNIVSTSVWGVLSFSLNGAVFILLGMQLPRAMKASWSDPYISNLKLIGIILLVTLVV IALRFFWIVAMLRVARDVHTRRRRKMTPERWRSATVMTFGGPKGTITLSLMFTIPYYLAGGAPFPMRNELIFIASGVIVV TLMLANFLLPLLAPNRGKDPSAEMIPVTIDVLRATVEELTGRITPENRRAILMVIDQYTKRIGRLQQRIGDTDPQGFEQL QIEALHWEKEFVRDRLADTKAHPAADTATQELNVEACERMLDQIMNTLRHTSTDPTSGHAVSQIRGRLRMFQRQMSNYAK RTVSKIRHTTPLVSEDRIFARTRELQVEAIHHVIGQLIDEMGQDTYNTEHCSALLLDYRRAAASLQARPNMSGTTETITQ VEDVKRESYGIELGVIQDMYEAGDINRTQARSLRRNIYVMQVDADSGI
Specific function: Transporter involved in the efflux of sodium, potassium, lithium and rubidium [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. Nhak (TC 2.A.36.3.2) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790501, Length=547, Percent_Identity=32.1755027422303, Blast_Score=222, Evalue=6e-59, Organism=Caenorhabditis elegans, GI25150332, Length=396, Percent_Identity=23.2323232323232, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71980847, Length=367, Percent_Identity=23.9782016348774, Blast_Score=70, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR018417 - InterPro: IPR004705 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 76035; Mature: 75904
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFELILCIIAAVVVSSFASRFVPKVSTPLVQIVLGVLVTYLPFFPDAKLDPELFMVLF CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH IAPLLYLEAHEIDKSALLKTLDLSLSLAIGLAIVTMAAVGFTLHAVWPSITLASALALGA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGPTDAVAVSSLGKEASLTQRQRSVLKGESLFNDASGIVGFQFALAAAFTGEFAVGQAA CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH GEFLMSFFGGTLFGLVIAAANWLFETVRSLGWETTTTRILMELFLPFLLYLGAEEFNVSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH ILSVVAAGLFIRFDRTGVGPNVARTNIVSTSVWGVLSFSLNGAVFILLGMQLPRAMKASW HHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCHHHHCCC SDPYISNLKLIGIILLVTLVVIALRFFWIVAMLRVARDVHTRRRRKMTPERWRSATVMTF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEE GGPKGTITLSLMFTIPYYLAGGAPFPMRNELIFIASGVIVVTLMLANFLLPLLAPNRGKD CCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC PSAEMIPVTIDVLRATVEELTGRITPENRRAILMVIDQYTKRIGRLQQRIGDTDPQGFEQ CCCCEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHH LQIEALHWEKEFVRDRLADTKAHPAADTATQELNVEACERMLDQIMNTLRHTSTDPTSGH HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCH AVSQIRGRLRMFQRQMSNYAKRTVSKIRHTTPLVSEDRIFARTRELQVEAIHHVIGQLID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EMGQDTYNTEHCSALLLDYRRAAASLQARPNMSGTTETITQVEDVKRESYGIELGVIQDM HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH YEAGDINRTQARSLRRNIYVMQVDADSGI HHCCCCCHHHHHHHHCCEEEEEECCCCCC >Mature Secondary Structure AVFELILCIIAAVVVSSFASRFVPKVSTPLVQIVLGVLVTYLPFFPDAKLDPELFMVLF HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH IAPLLYLEAHEIDKSALLKTLDLSLSLAIGLAIVTMAAVGFTLHAVWPSITLASALALGA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGPTDAVAVSSLGKEASLTQRQRSVLKGESLFNDASGIVGFQFALAAAFTGEFAVGQAA CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH GEFLMSFFGGTLFGLVIAAANWLFETVRSLGWETTTTRILMELFLPFLLYLGAEEFNVSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH ILSVVAAGLFIRFDRTGVGPNVARTNIVSTSVWGVLSFSLNGAVFILLGMQLPRAMKASW HHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCHHHHCCC SDPYISNLKLIGIILLVTLVVIALRFFWIVAMLRVARDVHTRRRRKMTPERWRSATVMTF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEE GGPKGTITLSLMFTIPYYLAGGAPFPMRNELIFIASGVIVVTLMLANFLLPLLAPNRGKD CCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC PSAEMIPVTIDVLRATVEELTGRITPENRRAILMVIDQYTKRIGRLQQRIGDTDPQGFEQ CCCCEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHH LQIEALHWEKEFVRDRLADTKAHPAADTATQELNVEACERMLDQIMNTLRHTSTDPTSGH HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCH AVSQIRGRLRMFQRQMSNYAKRTVSKIRHTTPLVSEDRIFARTRELQVEAIHHVIGQLID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EMGQDTYNTEHCSALLLDYRRAAASLQARPNMSGTTETITQVEDVKRESYGIELGVIQDM HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH YEAGDINRTQARSLRRNIYVMQVDADSGI HHCCCCCHHHHHHHHCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA