| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is bgaB [H]
Identifier: 213693262
GI number: 213693262
Start: 2705165
End: 2707285
Strand: Direct
Name: bgaB [H]
Synonym: Blon_2416
Alternate gene names: 213693262
Gene position: 2705165-2707285 (Clockwise)
Preceding gene: 213693255
Following gene: 213693264
Centisome position: 95.5
GC content: 67.52
Gene sequence:
>2121_bases ATGACCGACACCATGGCACACACCCAACCCGCATCACCCGCATCACCCGCATCGCCTGCACCGACCATCACCGCACCGGG CGGCCGCTTCGTCTTCGGCGGCGACTGGAACCCCGAGCAGTGGGACGAATCCACCTGGGCGGACGACATCGCCAAACTCG AACGCGCCGGCATCAACGAGGCCACCATCAACGTGTTCTCCTGGGCGCTGATCCAGCCGGACGAGAGCCGCTACGACTTC GCCATGCTCGACCGCATCGTCGACCTGCTGGTCGCGCACGACTTCGGCTTCGTCCTGGCCACGTCCACCGGCGCGCTACC CGCATGGATCGCGCAACGCTACCCCGACGCCACGCGCACCGACTACGAAGGCCGTCGCCACCGCTTCGGCGTGCGGCACA ACGCCTGCCCGAATTCGCCGAACTTCCTGCGCCTGGCCGGCGCGCTGGCCGGCAAGCTCGCCGAACGCTACGGCGCCAAC GACCATCTGATCGCCTGGCACATCTCCAACGAGCTCGGCGGCCGCTGCTACTGCGACAACTGCGCCGCCGCCTTCCGCGT CTGGCTCGAACGCAAGTACGGTTCGATCGAGGCGTTGAACCGCGCGTGGAACGCGAACTTCTGGAGCCATACCTACGCCG ATTTCGCCCAGATCCTACCGCCGAACGCGATCAGCGACGGACTGGACGGCGAGCGCGCCACTCTGTCCGCCTGCAGCATC GACTACAAGCGGTTCCAGTCCGACTCGCTGCTGGGCACCTACGTCACCGAGCGCGACGCGATCCGCGCGTTCGACGCGAT GCATCCGATCACCACGAACCTCATGGACACCTACGAGGGTGCCGATTATTTCCGTTGGGGGCGCGAGATGGACGTGATCA GCTGGGACGATTATCCGTTCCCGCACACCACGCCTTCCGACAATGCGTTCAAGCACGATCTGATGCGCGGCGTGGGCGAC GGCAGGCCGTTCATGCTCATGGAGTCGACGCCGAACCAGACGAACTGGCAGGAGTGCAACGTACTGCGCGCGCCCGGGCG GATGCGTGCGGAAAGCTATCAGGCGGTCGCGCATGGCGCGGATACCGTGCAGTATTTCCAGCTCAAGCAGTCGCGCGGCG GGTTCGAGAAGTACCATGGCGCGGTGATCTCGCACGGCGGGCGCGAGGACGAGCGCGTGTACGGCGAGGTGCGTGCGCTC GGCGGCGAGCTGGCGGCGCACGGCGCGCGGTTCGTGGGCGGTCTGACCGAGGCGCCGGTCGCGCTGATGTTCGACTGGGA TTCGTATTGGTCGACCGAGAACATTTCGTTGCTGCCGAAGGGCTTCGACTATCCGGATCAGGTGCGGCGCTGGTATGCGC CGTTCCACCACCGCAACATCGCGGTGGATGTGGTGCCGGAAGACATTGACGCCGGGCGGCTGGCGGGCTATCGCGTGCTG GTCGCGCCGGCGCTCATGATGGCCAAGCCGGGCGTTCGTGAGCTGGTCGAGGGGTTCGTGCGCGCCGGCGGCACGTTCCT GGCGACGGTGATGGCAGGCATGCACGACGAGCATGACAACGTGATCCTCGGCGGATACCCGGGCGCGTTCCGTGAGGTGT GCGGAATGCGCATGGAGGAGATGGACATGATCCCGGACGGCCGCGACGTGCGTGTCGTGTTCGGTTCGGGCGAGGGCGAG GACGCGGACACGGACGGGTCCCGGGTCTCGCTGGTTGCCGGGCTGATCAAGCTCGACGGCGGGGCGCGCCCTCTGGCGGC CTACGCCGGCGACGTGTTCTACCGGGGTACGCCGGCGGTGACGGTGAACGATTTCGGCGCGGGCACGGCGTATTTCGCCG GTGCGGTGCTGGACGAGGCCGGCATGGACGCCGTGGTCGGCGACGTGGTGCGCCGGGCCGGCGTTACCGGCATCGTCTCG CCGGAGCCGGTGGAGGTGGTTACGCGGCGGTACCCGTCACGCGGGGAGTCGTTGACGTTCGTGATCAACCATGCGGATAC GGCCACGGCGTGGCAGGATACGCCGTTCGCCGGATGCGAGTCGGTGCTTGACGGCACGGTACTGGGCAGGGATCTGGTGC TGGAGCCGTACGGCGTGACGGTGGTGCGCACCGCGGCATGA
Upstream 100 bases:
>100_bases CGCGACGCCGAACCACCCCAACGCGAGTCCGCCGCACGCCGGCCACAACGCCGAGACCGGCCGCAGGCCGCATCATCGTC ATCGCAAAGGAGTACGCATC
Downstream 100 bases:
>100_bases CGGATTCGGCCGCAGGCCGGTTGCGGACCATATCCCAAGTCAGCAACCGGCCGAACCATATCTCGCGGCTGCAGTCATCC TTCATCATCAGTATTCGGTA
Product: Beta-galactosidase
Products: NA
Alternate protein names: Beta-gal; Beta-galactosidase I; Lactase [H]
Number of amino acids: Translated: 706; Mature: 705
Protein sequence:
>706_residues MTDTMAHTQPASPASPASPAPTITAPGGRFVFGGDWNPEQWDESTWADDIAKLERAGINEATINVFSWALIQPDESRYDF AMLDRIVDLLVAHDFGFVLATSTGALPAWIAQRYPDATRTDYEGRRHRFGVRHNACPNSPNFLRLAGALAGKLAERYGAN DHLIAWHISNELGGRCYCDNCAAAFRVWLERKYGSIEALNRAWNANFWSHTYADFAQILPPNAISDGLDGERATLSACSI DYKRFQSDSLLGTYVTERDAIRAFDAMHPITTNLMDTYEGADYFRWGREMDVISWDDYPFPHTTPSDNAFKHDLMRGVGD GRPFMLMESTPNQTNWQECNVLRAPGRMRAESYQAVAHGADTVQYFQLKQSRGGFEKYHGAVISHGGREDERVYGEVRAL GGELAAHGARFVGGLTEAPVALMFDWDSYWSTENISLLPKGFDYPDQVRRWYAPFHHRNIAVDVVPEDIDAGRLAGYRVL VAPALMMAKPGVRELVEGFVRAGGTFLATVMAGMHDEHDNVILGGYPGAFREVCGMRMEEMDMIPDGRDVRVVFGSGEGE DADTDGSRVSLVAGLIKLDGGARPLAAYAGDVFYRGTPAVTVNDFGAGTAYFAGAVLDEAGMDAVVGDVVRRAGVTGIVS PEPVEVVTRRYPSRGESLTFVINHADTATAWQDTPFAGCESVLDGTVLGRDLVLEPYGVTVVRTAA
Sequences:
>Translated_706_residues MTDTMAHTQPASPASPASPAPTITAPGGRFVFGGDWNPEQWDESTWADDIAKLERAGINEATINVFSWALIQPDESRYDF AMLDRIVDLLVAHDFGFVLATSTGALPAWIAQRYPDATRTDYEGRRHRFGVRHNACPNSPNFLRLAGALAGKLAERYGAN DHLIAWHISNELGGRCYCDNCAAAFRVWLERKYGSIEALNRAWNANFWSHTYADFAQILPPNAISDGLDGERATLSACSI DYKRFQSDSLLGTYVTERDAIRAFDAMHPITTNLMDTYEGADYFRWGREMDVISWDDYPFPHTTPSDNAFKHDLMRGVGD GRPFMLMESTPNQTNWQECNVLRAPGRMRAESYQAVAHGADTVQYFQLKQSRGGFEKYHGAVISHGGREDERVYGEVRAL GGELAAHGARFVGGLTEAPVALMFDWDSYWSTENISLLPKGFDYPDQVRRWYAPFHHRNIAVDVVPEDIDAGRLAGYRVL VAPALMMAKPGVRELVEGFVRAGGTFLATVMAGMHDEHDNVILGGYPGAFREVCGMRMEEMDMIPDGRDVRVVFGSGEGE DADTDGSRVSLVAGLIKLDGGARPLAAYAGDVFYRGTPAVTVNDFGAGTAYFAGAVLDEAGMDAVVGDVVRRAGVTGIVS PEPVEVVTRRYPSRGESLTFVINHADTATAWQDTPFAGCESVLDGTVLGRDLVLEPYGVTVVRTAA >Mature_705_residues TDTMAHTQPASPASPASPAPTITAPGGRFVFGGDWNPEQWDESTWADDIAKLERAGINEATINVFSWALIQPDESRYDFA MLDRIVDLLVAHDFGFVLATSTGALPAWIAQRYPDATRTDYEGRRHRFGVRHNACPNSPNFLRLAGALAGKLAERYGAND HLIAWHISNELGGRCYCDNCAAAFRVWLERKYGSIEALNRAWNANFWSHTYADFAQILPPNAISDGLDGERATLSACSID YKRFQSDSLLGTYVTERDAIRAFDAMHPITTNLMDTYEGADYFRWGREMDVISWDDYPFPHTTPSDNAFKHDLMRGVGDG RPFMLMESTPNQTNWQECNVLRAPGRMRAESYQAVAHGADTVQYFQLKQSRGGFEKYHGAVISHGGREDERVYGEVRALG GELAAHGARFVGGLTEAPVALMFDWDSYWSTENISLLPKGFDYPDQVRRWYAPFHHRNIAVDVVPEDIDAGRLAGYRVLV APALMMAKPGVRELVEGFVRAGGTFLATVMAGMHDEHDNVILGGYPGAFREVCGMRMEEMDMIPDGRDVRVVFGSGEGED ADTDGSRVSLVAGLIKLDGGARPLAAYAGDVFYRGTPAVTVNDFGAGTAYFAGAVLDEAGMDAVVGDVVRRAGVTGIVSP EPVEVVTRRYPSRGESLTFVINHADTATAWQDTPFAGCESVLDGTVLGRDLVLEPYGVTVVRTAA
Specific function: Unknown
COG id: COG1874
COG function: function code G; Beta-galactosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 42 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013739 - InterPro: IPR013738 - InterPro: IPR003476 - InterPro: IPR013529 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02449 Glyco_hydro_42; PF08533 Glyco_hydro_42C; PF08532 Glyco_hydro_42M [H]
EC number: =3.2.1.23 [H]
Molecular weight: Translated: 77451; Mature: 77320
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTMAHTQPASPASPASPAPTITAPGGRFVFGGDWNPEQWDESTWADDIAKLERAGINE CCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCHHHCCCHHHHHHHHHHHHCCCCH ATINVFSWALIQPDESRYDFAMLDRIVDLLVAHDFGFVLATSTGALPAWIAQRYPDATRT HEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCCC DYEGRRHRFGVRHNACPNSPNFLRLAGALAGKLAERYGANDHLIAWHISNELGGRCYCDN CCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECH CAAAFRVWLERKYGSIEALNRAWNANFWSHTYADFAQILPPNAISDGLDGERATLSACSI HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHH DYKRFQSDSLLGTYVTERDAIRAFDAMHPITTNLMDTYEGADYFRWGREMDVISWDDYPF HHHHHCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCEEECCCCCC PHTTPSDNAFKHDLMRGVGDGRPFMLMESTPNQTNWQECNVLRAPGRMRAESYQAVAHGA CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCEEECCCCCCHHHHHHHHCCC DTVQYFQLKQSRGGFEKYHGAVISHGGREDERVYGEVRALGGELAAHGARFVGGLTEAPV CHHHHHHHHHHCCCHHHHCCHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCE ALMFDWDSYWSTENISLLPKGFDYPDQVRRWYAPFHHRNIAVDVVPEDIDAGRLAGYRVL EEEEECHHHCCCCCCEECCCCCCCHHHHHHHHCCHHCCCEEEEECCCCCCCCHHCCCHHH VAPALMMAKPGVRELVEGFVRAGGTFLATVMAGMHDEHDNVILGGYPGAFREVCGMRMEE HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCHHH MDMIPDGRDVRVVFGSGEGEDADTDGSRVSLVAGLIKLDGGARPLAAYAGDVFYRGTPAV HCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEHHHHHCCCCCCCHHHHCCCEEECCCCEE TVNDFGAGTAYFAGAVLDEAGMDAVVGDVVRRAGVTGIVSPEPVEVVTRRYPSRGESLTF EEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEE VINHADTATAWQDTPFAGCESVLDGTVLGRDLVLEPYGVTVVRTAA EEECCCCCCCCCCCCCHHHHHHHCCHHCCCEEEECCCCEEEEEECC >Mature Secondary Structure TDTMAHTQPASPASPASPAPTITAPGGRFVFGGDWNPEQWDESTWADDIAKLERAGINE CCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCHHHCCCHHHHHHHHHHHHCCCCH ATINVFSWALIQPDESRYDFAMLDRIVDLLVAHDFGFVLATSTGALPAWIAQRYPDATRT HEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCCC DYEGRRHRFGVRHNACPNSPNFLRLAGALAGKLAERYGANDHLIAWHISNELGGRCYCDN CCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECH CAAAFRVWLERKYGSIEALNRAWNANFWSHTYADFAQILPPNAISDGLDGERATLSACSI HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHH DYKRFQSDSLLGTYVTERDAIRAFDAMHPITTNLMDTYEGADYFRWGREMDVISWDDYPF HHHHHCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCEEECCCCCC PHTTPSDNAFKHDLMRGVGDGRPFMLMESTPNQTNWQECNVLRAPGRMRAESYQAVAHGA CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCEEECCCCCCHHHHHHHHCCC DTVQYFQLKQSRGGFEKYHGAVISHGGREDERVYGEVRALGGELAAHGARFVGGLTEAPV CHHHHHHHHHHCCCHHHHCCHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCE ALMFDWDSYWSTENISLLPKGFDYPDQVRRWYAPFHHRNIAVDVVPEDIDAGRLAGYRVL EEEEECHHHCCCCCCEECCCCCCCHHHHHHHHCCHHCCCEEEEECCCCCCCCHHCCCHHH VAPALMMAKPGVRELVEGFVRAGGTFLATVMAGMHDEHDNVILGGYPGAFREVCGMRMEE HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCHHH MDMIPDGRDVRVVFGSGEGEDADTDGSRVSLVAGLIKLDGGARPLAAYAGDVFYRGTPAV HCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEHHHHHCCCCCCCHHHHCCCEEECCCCEE TVNDFGAGTAYFAGAVLDEAGMDAVVGDVVRRAGVTGIVSPEPVEVVTRRYPSRGESLTF EEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEE VINHADTATAWQDTPFAGCESVLDGTVLGRDLVLEPYGVTVVRTAA EEECCCCCCCCCCCCCHHHHHHHCCHHCCCEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3086288 [H]