Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213693255

Identifier: 213693255

GI number: 213693255

Start: 2696034

End: 2697431

Strand: Direct

Name: 213693255

Synonym: Blon_2409

Alternate gene names: NA

Gene position: 2696034-2697431 (Clockwise)

Preceding gene: 213693252

Following gene: 213693262

Centisome position: 95.17

GC content: 56.29

Gene sequence:

>1398_bases
ATGTTCGTCGGGCGAGATAAGGAGCTTTCGGCACTGGAACGCCGCTGGAGCTCACAGCAGTTCGAGTGCGTCGTGGCCTA
CGGCCGTCGCCGCGTGGGCAAGACCACACTCATCAACCGCTTCCTCGAAGATCGCCCCACGATTTTCTTTTCGGCAATCG
AATCCAGCGCTTCCAAGAATCTCGAATCGTTAAGCCGCAGCATTGCTCTGTATGAAAAGGGCTCAGAGGCGTTCGAGACA
GCGCCCGTATACCGCAGCTTTGAATCCGCACTGGAAGCGGTGTTCGCGCTGGCCGCAAAGCAACGCATCGCCTTCGTCAT
CGACGAGTACCCATATCTGGCTAAAGCAGACCGGACCATCAATTCGGTCCTGCAGCATGCCATCGACCGCCATAAGGATG
ACAGTCAGCTCATGATGGTGTTATGCGGCTCTTCCATGTCGTTCATGGAGCGCCAGGTGCTTGGGTATGAGAGCCCCCTG
TACGGCAGACGCACCGCTCAAATCAAAGTGGAGCCATTCGGCTACGCCGATGTCCGCAAGTTCTTGCCAAGATACAGCAA
CGAGGACGCCGCCATTGCTTACGGACTTACCGACGGTATCCCGCAGTATCTTCGGCAACTGGACGACGGCATCAGCATCC
GAGACAACATCCGTTGGAACATCCTCGACCCAAGCTGCTATCTGTTTGAGGAGCCAGACAACTTGCTGAAGCAGGAGCTG
CGCAGTCCGGCCGAGTACAACGCCGTAATCCAGGCCATTGCCTCCGGGGCATCTCGGTCGAACACCATCGCCACCGCATG
CCATATGGAATCGTCCTCATGCGCCACCTATTTGCGCAATCTCATCGATCTGGGAATCGTTCGCAAGGAGACACCTTTCG
GCGAGGACGCTCCTCGCAAGACGATCTACCGTATCGAGAACTCGTTCTTCCGATTCTGGTACCGATATGTGCCGAACAAC
ATGTCCCTCATTCAATCCGGTCATGCCGATCTCGCCGCCGACCGTGTTATGCGCACTATCTCCGACTTTATGGGGCAGGT
GTTCGAAGACATCTGTGTTCAGTGGATATGGTCCCATAACGGTACCGAGGCATTGCCTTTCCTCATGCTTGATGCCGGAC
GTTGGTGGGGCGCCAATCCGACCACCCGCAGTCAGGAGGAAATTGACATCGTGGCTTCAGGAGAAAAACCGAAAACTCTC
CTATTCTGCGAATGCAAATGGCGCAGCGTGCCATCCGGTCTGCAGCAGTTGGAAGTGCTGCGCAATCGCGCCAGACTGCT
GCACCCCGAAACCAGCCATTACATGCTGTTCTCCAAATCAGGCTTCGACGAGCATGTCGCCGCCCGCGCGGCGCAAGACG
GTACAGTGACGCTTGTCGATTTTGCGGATATGGATTAG

Upstream 100 bases:

>100_bases
ATACCAGTCGACCAAATTATAGAATCATAATTAAGTAAATTACGATTCTATAATTTGCGCGTGTGCACCAGGCAGACAGC
AAAGCAAGGAGACAAGGGCC

Downstream 100 bases:

>100_bases
TCGGTTCACTCCATTGCGGACGGTAAGGGTGAAGTAACAGGCTGGGTCAATGGACCGAACCGCTAGACCGGGCAACAGGC
CCAATCCGCGACACATTCCC

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MFVGRDKELSALERRWSSQQFECVVAYGRRRVGKTTLINRFLEDRPTIFFSAIESSASKNLESLSRSIALYEKGSEAFET
APVYRSFESALEAVFALAAKQRIAFVIDEYPYLAKADRTINSVLQHAIDRHKDDSQLMMVLCGSSMSFMERQVLGYESPL
YGRRTAQIKVEPFGYADVRKFLPRYSNEDAAIAYGLTDGIPQYLRQLDDGISIRDNIRWNILDPSCYLFEEPDNLLKQEL
RSPAEYNAVIQAIASGASRSNTIATACHMESSSCATYLRNLIDLGIVRKETPFGEDAPRKTIYRIENSFFRFWYRYVPNN
MSLIQSGHADLAADRVMRTISDFMGQVFEDICVQWIWSHNGTEALPFLMLDAGRWWGANPTTRSQEEIDIVASGEKPKTL
LFCECKWRSVPSGLQQLEVLRNRARLLHPETSHYMLFSKSGFDEHVAARAAQDGTVTLVDFADMD

Sequences:

>Translated_465_residues
MFVGRDKELSALERRWSSQQFECVVAYGRRRVGKTTLINRFLEDRPTIFFSAIESSASKNLESLSRSIALYEKGSEAFET
APVYRSFESALEAVFALAAKQRIAFVIDEYPYLAKADRTINSVLQHAIDRHKDDSQLMMVLCGSSMSFMERQVLGYESPL
YGRRTAQIKVEPFGYADVRKFLPRYSNEDAAIAYGLTDGIPQYLRQLDDGISIRDNIRWNILDPSCYLFEEPDNLLKQEL
RSPAEYNAVIQAIASGASRSNTIATACHMESSSCATYLRNLIDLGIVRKETPFGEDAPRKTIYRIENSFFRFWYRYVPNN
MSLIQSGHADLAADRVMRTISDFMGQVFEDICVQWIWSHNGTEALPFLMLDAGRWWGANPTTRSQEEIDIVASGEKPKTL
LFCECKWRSVPSGLQQLEVLRNRARLLHPETSHYMLFSKSGFDEHVAARAAQDGTVTLVDFADMD
>Mature_465_residues
MFVGRDKELSALERRWSSQQFECVVAYGRRRVGKTTLINRFLEDRPTIFFSAIESSASKNLESLSRSIALYEKGSEAFET
APVYRSFESALEAVFALAAKQRIAFVIDEYPYLAKADRTINSVLQHAIDRHKDDSQLMMVLCGSSMSFMERQVLGYESPL
YGRRTAQIKVEPFGYADVRKFLPRYSNEDAAIAYGLTDGIPQYLRQLDDGISIRDNIRWNILDPSCYLFEEPDNLLKQEL
RSPAEYNAVIQAIASGASRSNTIATACHMESSSCATYLRNLIDLGIVRKETPFGEDAPRKTIYRIENSFFRFWYRYVPNN
MSLIQSGHADLAADRVMRTISDFMGQVFEDICVQWIWSHNGTEALPFLMLDAGRWWGANPTTRSQEEIDIVASGEKPKTL
LFCECKWRSVPSGLQQLEVLRNRARLLHPETSHYMLFSKSGFDEHVAARAAQDGTVTLVDFADMD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011579
- InterPro:   IPR004256
- InterPro:   IPR011335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01637 Arch_ATPase; PF03008 DUF234 [H]

EC number: NA

Molecular weight: Translated: 52972; Mature: 52972

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVGRDKELSALERRWSSQQFECVVAYGRRRVGKTTLINRFLEDRPTIFFSAIESSASKN
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHHHH
LESLSRSIALYEKGSEAFETAPVYRSFESALEAVFALAAKQRIAFVIDEYPYLAKADRTI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH
NSVLQHAIDRHKDDSQLMMVLCGSSMSFMERQVLGYESPLYGRRTAQIKVEPFGYADVRK
HHHHHHHHHCCCCCHHEEHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHH
FLPRYSNEDAAIAYGLTDGIPQYLRQLDDGISIRDNIRWNILDPSCYLFEEPDNLLKQEL
HCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEECCCEEEEECCCEEEEECCHHHHHHHH
RSPAEYNAVIQAIASGASRSNTIATACHMESSSCATYLRNLIDLGIVRKETPFGEDAPRK
CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEECCCCCCCCCCHH
TIYRIENSFFRFWYRYVPNNMSLIQSGHADLAADRVMRTISDFMGQVFEDICVQWIWSHN
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTEALPFLMLDAGRWWGANPTTRSQEEIDIVASGEKPKTLLFCECKWRSVPSGLQQLEVL
CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHH
RNRARLLHPETSHYMLFSKSGFDEHVAARAAQDGTVTLVDFADMD
HHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure
MFVGRDKELSALERRWSSQQFECVVAYGRRRVGKTTLINRFLEDRPTIFFSAIESSASKN
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHHHH
LESLSRSIALYEKGSEAFETAPVYRSFESALEAVFALAAKQRIAFVIDEYPYLAKADRTI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH
NSVLQHAIDRHKDDSQLMMVLCGSSMSFMERQVLGYESPLYGRRTAQIKVEPFGYADVRK
HHHHHHHHHCCCCCHHEEHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHH
FLPRYSNEDAAIAYGLTDGIPQYLRQLDDGISIRDNIRWNILDPSCYLFEEPDNLLKQEL
HCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEECCCEEEEECCCEEEEECCHHHHHHHH
RSPAEYNAVIQAIASGASRSNTIATACHMESSSCATYLRNLIDLGIVRKETPFGEDAPRK
CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEECCCCCCCCCCHH
TIYRIENSFFRFWYRYVPNNMSLIQSGHADLAADRVMRTISDFMGQVFEDICVQWIWSHN
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTEALPFLMLDAGRWWGANPTTRSQEEIDIVASGEKPKTLLFCECKWRSVPSGLQQLEVL
CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHH
RNRARLLHPETSHYMLFSKSGFDEHVAARAAQDGTVTLVDFADMD
HHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]